Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-119 432.6 199 100.0
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-100 369.8 199 86.9
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 6.6e-100 367.5 199 86.4
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 8.1e-98 360.5 199 83.9
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-75 286.6 152 86.8
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 6.7e-60 234.6 200 56.0
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 4.8e-58 228.4 200 55.0
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 4.8e-58 228.4 200 55.5
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 4.1e-57 225.3 199 56.3
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-56 223.4 200 55.0
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 2.6e-56 222.6 200 55.0
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 2.6e-56 222.6 200 55.0
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 2.6e-56 222.6 196 58.2
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-56 222.2 200 55.0
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 3.4e-56 222.2 200 55.0
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 5.9e-56 221.5 199 56.3
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 1.7e-55 219.9 200 55.0
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 2.9e-55 219.2 200 54.0
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 2.9e-55 219.2 200 54.0
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 1.4e-54 216.9 200 54.0
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-54 216.1 194 55.2
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 5.5e-54 214.9 200 54.5
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 9.4e-54 214.2 200 53.0
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-53 212.6 183 56.3
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 4.7e-53 211.8 200 53.0
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 2.6e-51 206.1 195 52.8
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-50 203.0 200 51.0
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-49 200.7 200 52.0
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 3.1e-49 199.1 200 51.0
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 1.2e-48 197.2 200 49.5
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 2.0e-48 196.4 194 50.5
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 2.0e-48 196.4 194 50.5
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 7.7e-48 194.5 200 48.5
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 1.9e-46 189.9 169 56.2
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-45 186.8 199 48.7
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-45 186.0 152 57.2
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-44 184.1 152 57.2
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-44 183.7 184 49.5
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 6.7e-44 181.4 164 54.9
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-43 179.1 147 60.5
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 4.8e-42 175.3 195 46.7
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 3.1e-41 172.6 141 58.9
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 3.1e-41 172.6 141 58.9
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 7.0e-41 171.4 148 56.8
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-40 170.2 195 45.1
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-40 169.9 190 45.8
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-40 169.1 195 45.1
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-39 166.8 195 44.6
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-39 166.4 182 47.3
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-37 160.6 140 55.0
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 4.7e-37 158.7 195 42.6
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-36 157.1 148 50.7
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 1.8e-36 156.8 160 48.8
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 2.6e-35 152.9 124 62.1
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-33 146.4 143 53.1
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 3.8e-31 139.0 194 38.1
BcaB06g27469 Brassica carinata HOM05D003839 ORTHO05D003352 6.5e-31 138.3 71 93.0
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 8.5e-31 137.9 177 38.4
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-30 136.7 194 37.6
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 3.2e-30 136.0 194 37.6
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 5.5e-30 135.2 128 56.2
BcaB03g16489 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-29 134.0 150 44.0
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-29 134.0 163 39.3
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-29 134.0 116 58.6
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 1.2e-29 134.0 116 58.6
A09p32650 Brassica napus HOM05D003839 ORTHO05D003352 2.6e-27 126.3 116 56.0
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-26 123.2 177 36.2
A03p67260 Brassica napus HOM05D003839 ORTHO05D003352 9.2e-25 117.9 99 60.6
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 8.6e-23 111.3 157 31.2
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 8.6e-23 111.3 146 40.4
BolC2t11209H Brassica oleracea HOM05D003839 ORTHO05D003352 1.9e-22 110.2 77 67.5
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 3.3e-22 109.4 130 41.5
A05p20350 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-21 106.7 107 53.3
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-21 106.7 161 31.7
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 2.1e-21 106.7 127 40.2
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-21 106.3 161 31.7
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-21 105.9 157 32.5
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.6e-21 105.9 157 35.0
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 1.8e-20 103.6 157 31.8
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 3.0e-20 102.8 144 40.3
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 5.2e-20 102.1 157 31.2
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 8.9e-20 101.3 161 31.1
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-19 100.9 145 34.5
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 5.7e-19 98.6 161 30.4
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 9.8e-19 97.8 145 33.8
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 9.8e-19 97.8 149 31.5
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 9.8e-19 97.8 133 36.8
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.7e-18 97.1 155 29.7
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 4.9e-18 95.5 152 30.3
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 6.4e-18 95.1 138 33.3
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 6.4e-18 95.1 156 32.7
BcaC07g38083 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-17 94.0 77 57.1
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-17 92.8 92 45.7
BcaC01g02980 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-16 89.4 136 36.8
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 3.5e-16 89.4 160 27.5
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 3.5e-16 89.4 132 34.1
BcaB05g23784 Brassica carinata HOM05D003839 ORTHO05D003352 4.6e-16 89.0 92 46.7
A01p17040 Brassica napus HOM05D008292 ORTHO05D003352 4.6e-16 89.0 139 30.9
BraA09t39508Z Brassica rapa HOM05D008292 ORTHO05D003352 4.6e-16 89.0 139 30.9
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 5.9e-16 88.6 132 34.1
AT5G17167 Arabidopsis thaliana HOM05D003839 ORTHO05D003352 1.7e-15 87.0 183 26.8
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-15 86.7 136 36.0
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 3.0e-15 86.3 161 28.6
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 3.9e-15 85.9 136 36.0
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 5.0e-15 85.5 72 58.3
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 5.0e-15 85.5 119 40.3
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-14 84.3 136 29.4
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-14 84.3 136 29.4
BcaB08g35819 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-14 84.0 65 60.0
BcaC05g25843 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-14 84.0 149 28.9
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 1.5e-14 84.0 119 39.5
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.5e-14 83.2 94 39.4
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 3.3e-14 82.8 91 41.8
C04p18360 Brassica napus HOM05D003839 ORTHO05D003352 9.5e-14 81.3 107 39.3
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 1.6e-13 80.5 160 26.9
BcaB07g30584 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-13 79.7 99 42.4
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.8e-13 79.7 103 34.0
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-13 79.3 157 28.7
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 3.6e-13 79.3 117 30.8
A06p31440 Brassica napus HOM05D008292 ORTHO05D003352 1.1e-12 77.8 194 23.7
A09p40840 Brassica napus HOM05D008292 ORTHO05D003352 1.1e-12 77.8 194 23.7
C03p57520 Brassica napus HOM05D014297 ORTHO05D019911 1.4e-12 77.4 102 37.3
C08p08050 Brassica napus HOM05D003839 ORTHO05D003352 3.1e-12 76.3 99 42.4
BcaC08g44791 Brassica carinata HOM05D003839 ORTHO05D003352 5.2e-12 75.5 93 38.7
BcaC09g48414 Brassica carinata HOM05D003839 ORTHO05D003352 5.2e-12 75.5 96 42.7
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 5.2e-12 75.5 144 25.0
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 6.8e-12 75.1 111 32.4
BcaC07g37358 Brassica carinata HOM05D003839 ORTHO05D003352 1.2e-11 74.3 96 42.7
BcaC06g36055 Brassica carinata HOM05D008292 ORTHO05D003352 2.0e-11 73.6 137 24.8
BcaNung06308 Brassica carinata HOM05D008292 ORTHO05D003352 4.4e-11 72.4 144 24.3
BcaB01g00717 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-10 70.9 64 53.1
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-10 70.9 97 36.1
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 1.7e-10 70.5 97 36.1
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.2e-10 70.1 94 34.0
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 2.9e-10 69.7 75 42.7
BraA01t01719Z Brassica rapa HOM05D003839 ORTHO05D003352 3.7e-10 69.3 85 37.6
BcaB01g00779 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-10 68.9 78 39.7
C02p51180 Brassica napus HOM05D003839 ORTHO05D003352 4.9e-10 68.9 52 63.5
BcaB05g23319 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-09 67.4 70 42.9
C02p23500 Brassica napus HOM05D010997 ORTHO05D014498 1.9e-09 67.0 142 28.9
BolC5t34000H Brassica oleracea HOM05D003839 ORTHO05D003352 1.9e-09 67.0 76 44.7
BolC1t03162H Brassica oleracea HOM05D003839 ORTHO05D003352 3.2e-09 66.2 91 42.9
BraA09t36993Z Brassica rapa HOM05D010997 ORTHO05D014498 3.2e-09 66.2 142 29.6
C05p32830 Brassica napus HOM05D003839 ORTHO05D003352 7.0e-09 65.1 62 48.4
C07p29940 Brassica napus HOM05D003839 ORTHO05D003352 9.2e-09 64.7 74 44.6
Thhalv10002917m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.2e-08 64.3 106 30.2
BcaC05g27209 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-08 63.9 59 54.2
BcaC09g47930 Brassica carinata HOM05D008292 ORTHO05D003352 1.6e-08 63.9 146 24.0
BcaC06g35172 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-08 63.5 59 54.2
BolC1t05291H Brassica oleracea HOM05D003839 ORTHO05D039488 2.0e-08 63.5 130 33.8
BcaC08g43741 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-08 62.8 54 46.3
BcaC09g48196 Brassica carinata HOM05D003839 ORTHO05D039488 3.5e-08 62.8 94 39.4
BcaB04g17804 Brassica carinata HOM05D003839 ORTHO05D003352 6.0e-08 62.0 86 31.4
C01p50050 Brassica napus HOM05D003839 ORTHO05D003352 6.0e-08 62.0 82 40.2
BcaC07g41300 Brassica carinata HOM05D008292 ORTHO05D003352 1.0e-07 61.2 109 28.4
C08p08700 Brassica napus HOM05D000096 ORTHO05D000045 1.3e-07 60.8 103 29.1
A09p52190 Brassica napus HOM05D010997 ORTHO05D014498 5.0e-07 58.9 141 27.7
BcaC07g37399 Brassica carinata HOM05D008292 ORTHO05D003352 6.6e-07 58.5 196 20.4
C07p23690 Brassica napus HOM05D010997 ORTHO05D014498 8.6e-07 58.2 126 27.8
BcaB05g21582 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-06 57.4 73 38.4
BcaC08g44281 Brassica carinata HOM05D003839 ORTHO05D039180 1.9e-06 57.0 99 38.4
BcaC08g44872 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-06 56.2 131 26.0
BcaB04g18557 Brassica carinata HOM05D003839 ORTHO05D003352 4.3e-06 55.8 73 38.4
C02p33960 Brassica napus HOM05D003839 ORTHO05D003352 4.3e-06 55.8 75 36.0
BraA01t02030Z Brassica rapa HOM05D035072 ORTHO05D003352 4.3e-06 55.8 67 40.3
BolC3t15567H Brassica oleracea HOM05D008292 ORTHO05D003352 9.5e-06 54.7 120 26.7


User provided reference genes

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