Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g06749 Brassica carinata HOM05D008901 ORTHO05D011696 8.1e-87 323.9 192 100.0
A06p02160 Brassica napus HOM05D008901 ORTHO05D023962 5.7e-32 141.7 211 55.9
BraA06t23427Z Brassica rapa HOM05D008901 ORTHO05D023962 2.2e-31 139.8 211 55.5
A10p05640 Brassica napus HOM05D008901 ORTHO05D023949 7.5e-24 114.8 142 52.8
BraA10t42825Z Brassica rapa HOM05D008901 ORTHO05D023949 1.8e-22 110.2 150 50.0
C05p05180 Brassica napus HOM05D008901 ORTHO05D023949 7.0e-22 108.2 140 52.1
C06p07190 Brassica napus HOM05D008901 ORTHO05D023962 9.1e-22 107.8 215 51.6
BolC6t35811H Brassica oleracea HOM05D008901 ORTHO05D023962 9.1e-22 107.8 215 51.6
BcaC05g24678 Brassica carinata HOM05D008901 ORTHO05D011696 1.2e-21 107.5 199 43.7
BolC5t29290H Brassica oleracea HOM05D008901 ORTHO05D023949 4.5e-21 105.5 140 50.0
C05p05190 Brassica napus HOM05D008901 ORTHO05D011696 1.7e-20 103.6 196 53.1
BcaC05g24677 Brassica carinata HOM05D008901 ORTHO05D023949 3.0e-17 92.8 124 51.6
BcaC08g43355 Brassica carinata HOM05D008901 ORTHO05D023962 4.0e-17 92.4 202 47.0
CARHR006840 Cardamine hirsuta HOM05D008901 ORTHO05D011696 3.4e-16 89.4 191 39.3
BolC5t29291H Brassica oleracea HOM05D008901 ORTHO05D011696 5.7e-16 88.6 173 49.1
C01p25450 Brassica napus HOM05D008901 ORTHO05D011696 9.2e-14 81.3 97 55.7
AL1G17260 Arabidopsis lyrata HOM05D008901 ORTHO05D011696 3.8e-12 75.9 191 37.2
BcaC07g42445 Brassica carinata HOM05D008901 ORTHO05D011696 8.6e-12 74.7 193 38.9
Sp6g37540 Schrenkiella parvula HOM05D008901 ORTHO05D011696 1.9e-11 73.6 63 60.3
A08p35760 Brassica napus HOM05D008901 ORTHO05D011696 3.3e-11 72.8 192 37.0
Thhalv10009119m.g Eutrema salsugineum HOM05D008901 ORTHO05D011696 4.3e-11 72.4 63 58.7
AT1G07135 Arabidopsis thaliana HOM05D008901 ORTHO05D011696 5.6e-11 72.0 197 35.5
BolC8t47082H Brassica oleracea HOM05D008901 ORTHO05D011696 7.3e-11 71.6 119 46.2
BcaC07g42025 Brassica carinata HOM05D008901 ORTHO05D011696 1.6e-10 70.5 65 60.0
Thhalv10009097m.g Eutrema salsugineum HOM05D008901 ORTHO05D011696 6.1e-10 68.6 61 55.7
C08p02860 Brassica napus HOM05D008901 ORTHO05D011696 8.0e-10 68.2 102 47.1
BcaB03g13404 Brassica carinata HOM05D008901 ORTHO05D011696 6.8e-09 65.1 68 55.9
CARHR006830 Cardamine hirsuta HOM05D008901 ORTHO05D011696 1.5e-08 63.9 111 43.2
Carub.0001s0642 Capsella rubella HOM05D008901 ORTHO05D011696 9.8e-08 61.2 69 52.2
BolC8t47091H Brassica oleracea HOM05D008901 ORTHO05D011696 2.2e-07 60.1 61 57.4
A08p35750 Brassica napus HOM05D008901 ORTHO05D011696 3.7e-07 59.3 69 53.6
BraA08t35482Z Brassica rapa HOM05D008901 ORTHO05D011696 3.7e-07 59.3 69 53.6
BcaC07g42023 Brassica carinata HOM05D008901 ORTHO05D011696 1.9e-06 57.0 194 33.5
C08p50790 Brassica napus HOM05D008901 ORTHO05D011696 1.9e-06 57.0 194 33.5


User provided reference genes

Program Settings