Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g06747 Brassica carinata HOM05D003314 ORTHO05D004164 1.9e-87 325.9 171 100.0
BcaB02g06745 Brassica carinata HOM05D003314 ORTHO05D004164 4.0e-61 238.4 182 77.5
C05p05170 Brassica napus HOM05D003314 ORTHO05D004164 5.4e-58 228.0 183 74.3
A10p05630 Brassica napus HOM05D003314 ORTHO05D004164 1.2e-57 226.9 184 74.5
BcaC05g24676 Brassica carinata HOM05D003314 ORTHO05D004164 3.5e-57 225.3 183 73.8
BolC5t29289H Brassica oleracea HOM05D003314 ORTHO05D004164 3.5e-57 225.3 183 73.8
BraA10t42824Z Brassica rapa HOM05D003314 ORTHO05D004164 4.6e-57 224.9 184 73.9
BcaC07g42027 Brassica carinata HOM05D003314 ORTHO05D004164 3.9e-56 221.9 159 76.1
C08p50810 Brassica napus HOM05D003314 ORTHO05D004164 3.9e-56 221.9 159 76.1
BolC8t52609H Brassica oleracea HOM05D003314 ORTHO05D004164 3.9e-56 221.9 159 76.1
BraA09t42000Z Brassica rapa HOM05D003314 ORTHO05D004164 3.9e-56 221.9 159 76.1
Thhalv10006901m.g Eutrema salsugineum HOM05D003314 ORTHO05D004164 8.6e-56 220.7 159 76.7
AL1G17230 Arabidopsis lyrata HOM05D003314 ORTHO05D004164 1.2e-54 216.9 159 74.8
A08p35790 Brassica napus HOM05D003314 ORTHO05D004164 1.2e-54 216.9 182 68.1
BraA08t35486Z Brassica rapa HOM05D003314 ORTHO05D004164 1.2e-54 216.9 182 68.1
BcaB03g13407 Brassica carinata HOM05D003314 ORTHO05D004164 6.2e-54 214.5 161 73.9
C08p02820 Brassica napus HOM05D003314 ORTHO05D004164 6.2e-54 214.5 182 69.2
BolC8t47077H Brassica oleracea HOM05D003314 ORTHO05D004164 6.2e-54 214.5 182 69.2
AT1G07110 Arabidopsis thaliana HOM05D003314 ORTHO05D004164 8.1e-54 214.2 159 74.8
Carub.0001s0639 Capsella rubella HOM05D003314 ORTHO05D004164 1.4e-53 213.4 159 74.2
Aa31LG1G6350 Aethionema arabicum HOM05D003314 ORTHO05D004164 5.2e-53 211.5 159 68.6
CARHR006800 Cardamine hirsuta HOM05D003314 ORTHO05D004164 2.0e-52 209.5 137 73.0
THA.LOC104800751 Tarenaya hassleriana HOM05D003314 ORTHO05D004164 3.4e-52 208.8 159 64.8
Sp1g05830 Schrenkiella parvula HOM05D003314 ORTHO05D004164 2.2e-51 206.1 153 68.6
THA.LOC104815810 Tarenaya hassleriana HOM05D003314 ORTHO05D004164 4.1e-50 201.8 159 63.5
Cpa.g.sc2.427 Carica papaya HOM05D003314 ORTHO05D004164 1.7e-48 196.4 137 69.3
Dinv28665 Davidia involucrata HOM05D003314 ORTHO05D004164 1.9e-47 193.0 159 59.7
Actinidia32631 Actinidia chinensis HOM05D003314 ORTHO05D004164 3.3e-47 192.2 137 67.2
ATR0681G099 Amborella trichopoda HOM05D003314 ORTHO05D004164 3.3e-47 192.2 137 65.7
Nn2g10926 Nelumbo nucifera HOM05D003314 ORTHO05D004164 7.3e-47 191.0 163 59.5
TAR636G3324 Trochodendron aralioides HOM05D003314 ORTHO05D004164 1.2e-46 190.3 137 67.9
GSVIVG01024699001 Vitis vinifera HOM05D003314 ORTHO05D004164 1.2e-46 190.3 137 65.7
Dinv09644 Davidia involucrata HOM05D003314 ORTHO05D004164 1.6e-46 189.9 162 59.9
Lj6g0001244 Lotus japonicus HOM05D003314 ORTHO05D004164 6.2e-46 188.0 162 58.6
TWI31G0289 Tripterygium wilfordii HOM05D003314 ORTHO05D004164 6.2e-46 188.0 163 57.7
Thecc.09G352300 Theobroma cacao HOM05D003314 ORTHO05D004164 1.1e-45 187.2 137 65.7
Duzib150G1198 Durio zibethinus HOM05D003314 ORTHO05D004164 4.0e-45 185.3 137 64.2
Atru.chr3.4168 Acer truncatum HOM05D003314 ORTHO05D004164 6.8e-45 184.5 137 64.2
Haze_24369 Corylus avellana HOM05D003314 ORTHO05D004164 8.9e-45 184.1 137 62.8
MBI15_g29380_MAGBIO Magnolia biondii HOM05D003314 ORTHO05D004164 8.9e-45 184.1 137 63.5
Oeu051518.1 Olea europaea HOM05D003314 ORTHO05D004164 8.9e-45 184.1 161 56.5
TWI79G1066 Tripterygium wilfordii HOM05D003314 ORTHO05D004164 8.9e-45 184.1 163 57.1
ClCG02G019450 Citrullus lanatus HOM05D003314 ORTHO05D004164 1.2e-44 183.7 137 62.0
Ciclev10027872m.g Citrus clementina HOM05D003314 ORTHO05D004164 1.2e-44 183.7 137 64.2
CsaV3_6G016080 Cucumis sativus L. HOM05D003314 ORTHO05D004164 1.2e-44 183.7 137 62.8
Duzib168G0330 Durio zibethinus HOM05D003314 ORTHO05D004164 1.2e-44 183.7 137 64.2
Hma1.2p1_1981F.1_g309920 Hydrangea macrophylla HOM05D003314 ORTHO05D004164 1.2e-44 183.7 137 64.2
TAR623G0703 Trochodendron aralioides HOM05D003314 ORTHO05D004164 1.2e-44 183.7 137 65.0
ECA247G1043 Erigeron canadensis HOM05D003314 ORTHO05D004164 1.5e-44 183.3 137 63.5
Sed0000995 Sechium edule HOM05D003314 ORTHO05D004164 2.6e-44 182.6 137 63.5
Cfa011730 Carpinus fangiana HOM05D003314 ORTHO05D004164 5.8e-44 181.4 137 61.3
Migut.N00780 Erythranthe guttata HOM05D003314 ORTHO05D004164 5.8e-44 181.4 162 56.8
Migut.O00636 Erythranthe guttata HOM05D003314 ORTHO05D004164 5.8e-44 181.4 162 56.8
QL01p039122 Quercus lobata HOM05D003314 ORTHO05D004164 5.8e-44 181.4 165 56.4
Eucgr.J01899 Eucalyptus grandis HOM05D003314 ORTHO05D004164 7.6e-44 181.0 159 56.0
Potri.001G279100 Populus trichocarpa HOM05D003314 ORTHO05D004164 7.6e-44 181.0 137 64.2
CANSAT54G2389 Cannabis sativa HOM05D003314 ORTHO05D004164 1.3e-43 180.3 137 64.2
Cc01_g14510 Coffea canephora HOM05D003314 ORTHO05D004164 1.3e-43 180.3 140 62.9
CSS0023090 Camellia sinensis var. sinensis HOM05D003314 ORTHO05D004164 1.7e-43 179.9 137 63.5
COL.COLO4_11092 Corchorus olitorius HOM05D003314 ORTHO05D004164 1.7e-43 179.9 137 63.5
SalBow2G2371 Salvia bowleyana HOM05D003314 ORTHO05D004164 1.7e-43 179.9 159 55.3
Glyma.11G169700 Glycine max HOM05D003314 ORTHO05D004164 2.9e-43 179.1 162 55.6
Glyma.18G060600 Glycine max HOM05D003314 ORTHO05D004164 2.9e-43 179.1 162 55.6
Potri.009G073800 Populus trichocarpa HOM05D003314 ORTHO05D004164 2.9e-43 179.1 137 62.8
vmacro02947 Vaccinium macrocarpon HOM05D003314 ORTHO05D004164 4.9e-43 178.3 137 62.8
Rhsim13G0067500 Rhododendron simsii HOM05D003314 ORTHO05D004164 6.4e-43 177.9 139 61.9
CiPaw.14G057100 Carya illinoinensis HOM05D003314 ORTHO05D004164 8.4e-43 177.6 137 62.0
DCAR_007359 Daucus carota HOM05D003314 ORTHO05D004164 8.4e-43 177.6 137 61.3
MSTRG.17878 Avicennia marina HOM05D003314 ORTHO05D004164 1.4e-42 176.8 163 55.2
Gohir.A03G028500 Gossypium hirsutum HOM05D003314 ORTHO05D004164 1.4e-42 176.8 140 62.9
Gohir.D03G140100 Gossypium hirsutum HOM05D003314 ORTHO05D004164 1.4e-42 176.8 140 62.9
Gorai.003G146900 Gossypium raimondii HOM05D003314 ORTHO05D004164 1.4e-42 176.8 140 62.9
Lj1A130T38 Lonicera japonica HOM05D003314 ORTHO05D004164 1.4e-42 176.8 172 55.8
PSO017G4706 Papaver somniferum HOM05D003314 ORTHO05D004164 1.4e-42 176.8 139 61.2
PSO170G0130 Papaver somniferum HOM05D003314 ORTHO05D004164 1.4e-42 176.8 139 61.2
Sc21g0000200 Simmondsia chinensis HOM05D003314 ORTHO05D004164 1.4e-42 176.8 138 61.6
CSS0049027 Camellia sinensis var. sinensis HOM05D003314 ORTHO05D004164 2.4e-42 176.0 137 62.8
MELO3C026830.2 Cucumis melo HOM05D003314 ORTHO05D004164 2.4e-42 176.0 152 56.6
MSTRG.12679 Avicennia marina HOM05D003314 ORTHO05D004164 7.1e-42 174.5 162 54.3
HanXRQChr08g0229151 Helianthus annuus HOM05D003314 ORTHO05D004164 7.1e-42 174.5 137 61.3
Sabra09G0055800 Salix brachista HOM05D003314 ORTHO05D004164 1.2e-41 173.7 137 59.9
Phvul.006G069900 Phaseolus vulgaris HOM05D003314 ORTHO05D004164 1.6e-41 173.3 137 59.1
PGR119G0996 Punica granatum HOM05D003314 ORTHO05D004164 1.6e-41 173.3 137 62.0
VMungo0540G1658 Vigna mungo HOM05D003314 ORTHO05D004164 1.6e-41 173.3 137 59.1
Nitab4.5_0000752g0070 Nicotiana tabacum HOM05D003314 ORTHO05D004164 2.7e-41 172.6 160 55.0
PGSC0003DMG400030370 Solanum tuberosum HOM05D003314 ORTHO05D004164 3.5e-41 172.2 158 55.1
Ah.01g002410 Amaranthus hybridus HOM05D003314 ORTHO05D004164 4.6e-41 171.8 137 59.1
SGA_v2.0_scaffold146G36142 Striga asiatica HOM05D003314 ORTHO05D004164 4.6e-41 171.8 162 55.6
TPR.G32920 Trifolium pratense HOM05D003314 ORTHO05D004164 4.6e-41 171.8 137 59.9
Medtr3g464770 Medicago truncatula HOM05D003314 ORTHO05D004164 6.0e-41 171.4 137 60.6
SGA_v2.0_scaffold120G32908 Striga asiatica HOM05D003314 ORTHO05D004164 6.0e-41 171.4 162 55.6
arahy.Tifrunner.gnm1.ann1.99UL3I Arachis hypogaea HOM05D003314 ORTHO05D004164 7.8e-41 171.0 138 59.4
arahy.Tifrunner.gnm1.ann1.H173G9 Arachis hypogaea HOM05D003314 ORTHO05D004164 7.8e-41 171.0 138 59.4
CSS0022626 Camellia sinensis var. sinensis HOM05D003314 ORTHO05D004164 7.8e-41 171.0 137 62.0
MBI15_g21757_MAGBIO Magnolia biondii HOM05D003314 ORTHO05D004164 7.8e-41 171.0 130 61.5
AUR62025049 Chenopodium quinoa HOM05D003314 ORTHO05D004164 3.9e-40 168.7 137 59.1
Manes.18G141800 Manihot esculenta HOM05D003314 ORTHO05D004164 3.9e-40 168.7 137 59.1
CDE06G0062 Ceratophyllum demersum HOM05D003314 ORTHO05D004164 5.1e-40 168.3 137 58.4
Lj2A1086G63 Lonicera japonica HOM05D003314 ORTHO05D004164 5.1e-40 168.3 138 58.0
Prupe.6G053800 Prunus persica HOM05D003314 ORTHO05D004164 5.1e-40 168.3 139 59.0
CDE12G0129 Ceratophyllum demersum HOM05D003314 ORTHO05D004164 6.6e-40 167.9 137 59.1
Os05g0164100 Oryza sativa ssp. japonica HOM05D003314 ORTHO05D004164 1.5e-39 166.8 155 54.2
AUR62041217 Chenopodium quinoa HOM05D003314 ORTHO05D004164 1.9e-39 166.4 133 61.7
Aqoxy4G02458 Aquilegia oxysepala HOM05D003314 ORTHO05D004164 2.5e-39 166.0 141 57.4
Zm00001eb282250 Zea mays HOM05D003314 ORTHO05D004164 2.5e-39 166.0 138 60.1
CiPaw.13G074400 Carya illinoinensis HOM05D003314 ORTHO05D004164 3.3e-39 165.6 130 60.0
EL10Ac9g22391 Beta vulgaris HOM05D003314 ORTHO05D004164 5.6e-39 164.9 137 56.9
Sopen06g033530 Solanum pennellii HOM05D003314 ORTHO05D004164 5.6e-39 164.9 158 53.8
FvH4_3g39080 Fragaria vesca HOM05D003314 ORTHO05D004164 9.6e-39 164.1 140 59.3
FAN21G3397 Fragaria x ananassa HOM05D003314 ORTHO05D004164 9.6e-39 164.1 140 59.3
Lsat_1_v5_gn_9_19140 Lactuca sativa HOM05D003314 ORTHO05D004164 9.6e-39 164.1 137 59.1
CAN.G1095.9 Capsicum annuum HOM05D003314 ORTHO05D004164 1.3e-38 163.7 134 60.4
FAN25G2774 Fragaria x ananassa HOM05D003314 ORTHO05D004164 2.1e-38 162.9 140 59.3
Solyc06g082150.4 Solanum lycopersicum HOM05D003314 ORTHO05D004164 2.1e-38 162.9 158 53.2
RcHm_v2.0_Chr5g0070401 Rosa chinensis HOM05D003314 ORTHO05D004164 3.6e-38 162.2 140 58.6
Hund08127 Selenicereus undatus HOM05D003314 ORTHO05D004164 1.4e-37 160.2 162 48.8
MD11G1068800 Malus domestica HOM05D003314 ORTHO05D004164 1.8e-37 159.8 140 57.9
MD03G1064800 Malus domestica HOM05D003314 ORTHO05D004164 2.4e-37 159.5 141 56.7
Lsat_1_v5_gn_5_172641 Lactuca sativa HOM05D003314 ORTHO05D004164 6.9e-37 157.9 137 56.9
HanXRQChr01g0011671 Helianthus annuus HOM05D003314 ORTHO05D004164 2.0e-36 156.4 137 56.9
Lalb_Chr15g0083041 Lupinus albus HOM05D003314 ORTHO05D004164 4.4e-36 155.2 138 57.2
Ca_14964_v3 Cicer arietinum L. HOM05D003314 ORTHO05D004164 3.8e-35 152.1 119 61.3
Lalb_Chr17g0345221 Lupinus albus HOM05D003314 ORTHO05D004164 6.4e-35 151.4 138 53.6
BcaB01g02467 Brassica carinata HOM05D003314 ORTHO05D004164 1.1e-34 150.6 110 69.1
ECA248G0301 Erigeron canadensis HOM05D003314 ORTHO05D004164 1.1e-34 150.6 137 54.7
Nitab4.5_0002352g0010 Nicotiana tabacum HOM05D003314 ORTHO05D004164 1.4e-34 150.2 146 50.7
Nitab4.5_0000839g0080 Nicotiana tabacum HOM05D003314 ORTHO05D004164 3.2e-34 149.1 146 50.0
Psat5g157680 Pisum sativum HOM05D003314 ORTHO05D004164 7.1e-34 147.9 137 54.0
LjContig00141g0002673 Lotus japonicus HOM05D003314 ORTHO05D004164 1.2e-33 147.1 137 54.7
arahy.Tifrunner.gnm1.ann1.UVU1B7 Arachis hypogaea HOM05D003314 ORTHO05D004164 1.5e-31 140.2 143 48.3
arahy.Tifrunner.gnm1.ann1.Y0JIV8 Arachis hypogaea HOM05D003314 ORTHO05D004164 1.5e-31 140.2 143 48.3
Peaxi162Scf00540g00022 Petunia axillaris HOM05D003314 ORTHO05D004164 3.3e-31 139.0 144 50.0
Phvul.008G259400 Phaseolus vulgaris HOM05D003314 ORTHO05D004164 7.3e-31 137.9 138 50.0
Glyma.14G195700 Glycine max HOM05D003314 ORTHO05D004164 1.6e-30 136.7 138 52.9
Psat2g055960 Pisum sativum HOM05D003314 ORTHO05D004164 4.8e-30 135.2 136 51.5
Glyma.02G228700 Glycine max HOM05D003314 ORTHO05D004164 1.4e-29 133.7 138 51.4
Medtr5g071900 Medicago truncatula HOM05D003314 ORTHO05D004164 4.5e-28 128.6 139 48.9
SEGI_31563 Sequoiadendron giganteum HOM05D003314 ORTHO05D004164 2.9e-27 125.9 101 64.4
Ca_05629_v3 Cicer arietinum L. HOM05D003314 ORTHO05D004164 3.2e-26 122.5 136 48.5
BcaC07g42443 Brassica carinata HOM05D003314 ORTHO05D004164 5.4e-26 121.7 85 71.8
TPR.G10945 Trifolium pratense HOM05D003314 ORTHO05D004164 3.5e-25 119.0 80 66.2
Os03g0294200 Oryza sativa ssp. japonica HOM05D003314 ORTHO05D004164 1.0e-24 117.5 147 41.5
HPP92_013781 Vanilla planifolia HOM05D003314 ORTHO05D004164 6.7e-24 114.8 167 41.9
SEGI_20353 Sequoiadendron giganteum HOM05D003314 ORTHO05D004164 2.5e-23 112.8 81 67.9
HPP92_006766 Vanilla planifolia HOM05D003314 ORTHO05D004164 5.6e-23 111.7 154 40.3
Mapoly0056s0097 Marchantia polymorpha HOM05D003314 ORTHO05D004164 1.6e-22 110.2 139 45.3
BcaC07g42444 Brassica carinata HOM05D003314 ORTHO05D039773 6.9e-21 104.8 101 54.5
Pp3c19_20300 Physcomitrium patens HOM05D003314 ORTHO05D004164 6.9e-21 104.8 152 42.1
Pp3c21_10950 Physcomitrium patens HOM05D003314 ORTHO05D004164 2.0e-20 103.2 173 37.0
Pp3c16_2340 Physcomitrium patens HOM05D003314 ORTHO05D004164 4.9e-19 98.6 151 38.4
Pp3c25_1530 Physcomitrium patens HOM05D003314 ORTHO05D004164 2.7e-17 92.8 151 36.4
HanXRQChr16g0518361 Helianthus annuus HOM05D003314 ORTHO05D004164 1.5e-12 77.0 51 68.6
HanXRQChr08g0229081 Helianthus annuus HOM05D003314 ORTHO05D004164 4.2e-10 68.9 58 58.6
SEGI_03083 Sequoiadendron giganteum HOM05D003314 ORTHO05D039773 1.5e-07 60.5 62 50.0


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