Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g06722 Brassica carinata HOM05D004802 ORTHO05D005591 4.3e-72 274.6 147 100.0
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 1.8e-70 269.2 147 95.2
BcaC07g41973 Brassica carinata HOM05D004802 ORTHO05D005591 1.5e-69 266.2 148 93.2
C08p50320 Brassica napus HOM05D004802 ORTHO05D005591 1.5e-69 266.2 148 93.2
BolC8t52561H Brassica oleracea HOM05D004802 ORTHO05D005591 1.5e-69 266.2 148 93.2
BraA06t23701Z Brassica rapa HOM05D004802 ORTHO05D005591 1.5e-69 266.2 147 93.2
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 2.9e-68 261.9 147 92.5
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 2.9e-68 261.9 147 92.5
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 3.8e-68 261.5 142 95.1
Sp1g06517 Schrenkiella parvula HOM05D004802 ORTHO05D005591 4.2e-67 258.1 147 92.5
BcaC07g42500 Brassica carinata HOM05D004802 ORTHO05D005591 1.6e-66 256.1 147 92.5
CARHR007640 Cardamine hirsuta HOM05D004802 ORTHO05D005591 1.1e-64 250.0 147 88.4
AL1G18110 Arabidopsis lyrata HOM05D004802 ORTHO05D005591 2.5e-64 248.8 147 87.8
AT1G07830 Arabidopsis thaliana HOM05D004802 ORTHO05D005591 9.7e-64 246.9 147 89.1
Carub.0005s0629 Capsella rubella HOM05D004802 ORTHO05D005591 8.2e-63 243.8 147 89.1
Thhalv10009035m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 1.5e-61 239.6 147 89.1
Thhalv10014955m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 2.2e-60 235.7 147 86.4
THA.LOC104821462 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 9.4e-59 230.3 148 81.8
THA.LOC104818227 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 1.6e-58 229.6 148 78.4
Aa31LG3G15940 Aethionema arabicum HOM05D004802 ORTHO05D005591 2.1e-58 229.2 147 83.7
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 3.0e-57 225.3 147 76.9
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 7.4e-56 220.7 147 76.9
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 1.3e-55 219.9 147 76.2
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 1.7e-55 219.5 147 74.1
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 1.4e-54 216.5 147 74.8
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 3.1e-54 215.3 147 78.2
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 5.3e-54 214.5 147 73.5
Rhsim12G0162600 Rhododendron simsii HOM05D004802 ORTHO05D005591 6.9e-54 214.2 147 77.6
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 9.1e-54 213.8 147 76.9
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 2.0e-53 212.6 147 73.5
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 2.6e-53 212.2 147 73.5
SGA_v2.0_scaffold114G31844 Striga asiatica HOM05D004802 ORTHO05D005591 2.6e-53 212.2 147 78.2
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 4.5e-53 211.5 147 73.5
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 4.5e-53 211.5 147 72.8
Lsat_1_v5_gn_5_17000 Lactuca sativa HOM05D004802 ORTHO05D005591 4.5e-53 211.5 147 71.4
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 5.9e-53 211.1 147 74.1
CANSAT80G2080 Cannabis sativa HOM05D004802 ORTHO05D005591 1.0e-52 210.3 147 76.9
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 1.7e-52 209.5 147 71.4
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 1.7e-52 209.5 147 72.1
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 1.7e-52 209.5 147 72.1
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 2.2e-52 209.1 147 76.2
TPR.G6374 Trifolium pratense HOM05D004802 ORTHO05D005591 2.2e-52 209.1 147 72.1
PSO170G0191 Papaver somniferum HOM05D004802 ORTHO05D005591 2.9e-52 208.8 148 73.0
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 3.8e-52 208.4 147 71.4
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 3.8e-52 208.4 147 72.1
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 3.8e-52 208.4 147 71.4
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 5.0e-52 208.0 147 71.4
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 6.5e-52 207.6 147 70.7
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 6.5e-52 207.6 150 72.0
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 6.5e-52 207.6 147 71.4
TWI75G1644 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 8.5e-52 207.2 147 72.1
Ciclev10022742m.g Citrus clementina HOM05D004802 ORTHO05D005591 1.1e-51 206.8 147 78.9
TWI32G0003 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 1.4e-51 206.5 147 70.7
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 1.9e-51 206.1 147 70.1
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 1.9e-51 206.1 147 72.8
Actinidia34948 Actinidia chinensis HOM05D004802 ORTHO05D005591 2.5e-51 205.7 132 75.8
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 2.5e-51 205.7 147 70.7
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 2.5e-51 205.7 147 72.8
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 4.2e-51 204.9 147 70.7
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 4.2e-51 204.9 146 70.5
Sc16g0001640 Simmondsia chinensis HOM05D004802 ORTHO05D005591 4.2e-51 204.9 147 75.5
AUR62008830 Chenopodium quinoa HOM05D004802 ORTHO05D005591 5.5e-51 204.5 147 72.1
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 5.5e-51 204.5 147 72.1
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 7.2e-51 204.1 148 72.3
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 7.2e-51 204.1 147 70.7
PSO782G1633 Papaver somniferum HOM05D004802 ORTHO05D005591 7.2e-51 204.1 148 70.9
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 9.4e-51 203.8 155 74.2
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 9.4e-51 203.8 136 76.5
Cc00_g03600 Coffea canephora HOM05D004802 ORTHO05D005591 9.4e-51 203.8 147 74.8
AUR62025410 Chenopodium quinoa HOM05D004802 ORTHO05D005591 1.2e-50 203.4 147 72.1
Psat2g170440 Pisum sativum HOM05D004802 ORTHO05D005591 1.2e-50 203.4 147 72.1
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 1.2e-50 203.4 147 70.1
Aqoxy5G00387 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 1.6e-50 203.0 147 70.7
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 2.1e-50 202.6 147 74.1
CDE01G0824 Ceratophyllum demersum HOM05D004802 ORTHO05D005591 3.6e-50 201.8 147 68.7
PGSC0003DMG400024483 Solanum tuberosum HOM05D004802 ORTHO05D005591 3.6e-50 201.8 147 74.1
HanXRQChr05g0163301 Helianthus annuus HOM05D004802 ORTHO05D005591 4.7e-50 201.4 150 73.3
HanXRQChr05g0163571 Helianthus annuus HOM05D004802 ORTHO05D005591 4.7e-50 201.4 150 73.3
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 4.7e-50 201.4 110 88.2
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 6.1e-50 201.1 147 71.4
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 6.1e-50 201.1 147 71.4
HPP92_014441 Vanilla planifolia HOM05D004802 ORTHO05D005591 6.1e-50 201.1 132 72.7
COL.COLO4_24762 Corchorus olitorius HOM05D004802 ORTHO05D005591 1.0e-49 200.3 147 76.9
Duzib068G0850 Durio zibethinus HOM05D004802 ORTHO05D005591 1.0e-49 200.3 148 74.3
Sc12g0005500 Simmondsia chinensis HOM05D004802 ORTHO05D005591 1.0e-49 200.3 147 68.0
Thecc.03G006700 Theobroma cacao HOM05D004802 ORTHO05D005591 1.4e-49 199.9 147 74.1
Actinidia19087 Actinidia chinensis HOM05D004802 ORTHO05D005591 2.3e-49 199.1 132 74.2
MD06G1178500 Malus domestica HOM05D004802 ORTHO05D005591 2.3e-49 199.1 110 87.3
Aqoxy3G01788 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 3.0e-49 198.7 147 72.8
Aqoxy3G02494 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 3.0e-49 198.7 148 70.3
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 3.0e-49 198.7 143 72.0
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 3.9e-49 198.4 147 70.1
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 3.9e-49 198.4 147 68.7
EL10Ac7g17734 Beta vulgaris HOM05D004802 ORTHO05D005591 5.1e-49 198.0 147 70.1
Ca_06425_v3 Cicer arietinum L. HOM05D000308 ORTHO05D000194 5.1e-49 198.0 147 73.5
SalBow2G1273 Salvia bowleyana HOM05D004802 ORTHO05D005591 1.1e-48 196.8 147 70.1
Ah.08g213760 Amaranthus hybridus HOM05D004802 ORTHO05D005591 1.5e-48 196.4 147 68.0
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 2.0e-48 196.1 134 74.6
Peaxi162Scf00017g02344 Petunia axillaris HOM05D004802 ORTHO05D005591 2.6e-48 195.7 147 73.5
Nitab4.5_0001422g0100 Nicotiana tabacum HOM05D004802 ORTHO05D005591 3.3e-48 195.3 110 84.5
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 9.7e-48 193.7 171 60.8
ECA246G1319 Erigeron canadensis HOM05D004802 ORTHO05D005591 9.7e-48 193.7 168 61.9
Gohir.A12G276300 Gossypium hirsutum HOM05D004802 ORTHO05D005591 1.7e-47 193.0 147 71.4
Gorai.008G297400 Gossypium raimondii HOM05D004802 ORTHO05D005591 1.7e-47 193.0 147 71.4
Medtr5g015850 Medicago truncatula HOM05D004802 ORTHO05D005591 3.7e-47 191.8 147 69.4
Gohir.D12G276900 Gossypium hirsutum HOM05D004802 ORTHO05D005591 6.3e-47 191.0 147 70.7
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 1.1e-46 190.3 147 68.0
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 1.4e-46 189.9 108 86.1
Manes.15G185900 Manihot esculenta HOM05D004802 ORTHO05D005591 1.4e-46 189.9 147 68.0
SEGI_23384 Sequoiadendron giganteum HOM05D004802 ORTHO05D005591 1.8e-46 189.5 147 66.7
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 3.1e-46 188.7 148 68.9
Zm00001eb378540 Zea mays HOM05D004802 ORTHO05D005591 5.3e-46 188.0 148 68.9
Os06g0128500 Oryza sativa ssp. japonica HOM05D004802 ORTHO05D005591 7.0e-46 187.6 113 81.4
Dinv25814 Davidia involucrata HOM05D004802 ORTHO05D005591 1.0e-44 183.7 106 84.0
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 1.3e-44 183.3 223 49.8
FvH4_5g16620 Fragaria vesca HOM05D004802 ORTHO05D005591 1.7e-44 183.0 147 66.7
FAN18G4009 Fragaria x ananassa HOM05D004802 ORTHO05D005591 5.0e-44 181.4 147 66.0
FAN13G0264 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.9e-43 179.5 147 68.0
FAN08G2523 Fragaria x ananassa HOM05D004802 ORTHO05D005591 2.5e-43 179.1 145 66.9
FAN04G1836 Fragaria x ananassa HOM05D004802 ORTHO05D005591 1.0e-41 173.7 112 75.9
Nitab4.5_0008768g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 2.6e-40 169.1 177 54.2
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 3.3e-40 168.7 178 53.4
ClCG06G016810 Citrullus lanatus HOM05D004802 ORTHO05D005591 1.1e-38 163.7 92 85.9
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 9.1e-38 160.6 95 83.2
RcHm_v2.0_Chr3g0484411 Rosa chinensis HOM05D004802 ORTHO05D005591 3.5e-37 158.7 90 84.4
QL03p067058 Quercus lobata HOM05D004802 ORTHO05D005591 7.7e-37 157.5 88 86.4
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 8.5e-36 154.1 113 69.0
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 3.2e-35 152.1 111 70.3
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 4.7e-34 148.3 112 71.4
Pp3c17_20320 Physcomitrium patens HOM05D004802 ORTHO05D005591 7.0e-30 134.4 118 54.2
Cc00_g30360 Coffea canephora HOM05D004802 ORTHO05D005591 2.7e-29 132.5 112 67.0
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 1.0e-28 130.6 101 68.3
Mapoly0009s0030 Marchantia polymorpha HOM05D004802 ORTHO05D005591 3.2e-27 125.6 108 58.3
Nitab4.5_0000003g0430 Nicotiana tabacum HOM05D004802 ORTHO05D005591 1.4e-25 120.2 151 54.3
CBR_g30055 Chara braunii HOM05D004802 ORTHO05D005591 2.0e-24 116.3 108 56.5
RcHm_v2.0_Chr3g0484341 Rosa chinensis HOM05D004802 ORTHO05D005591 2.8e-23 112.5 63 87.3
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis HOM05D004802 ORTHO05D005591 5.9e-21 104.8 74 70.3
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 1.0e-20 104.0 60 86.7
SHI01132 Sapria himalayana HOM05D004802 ORTHO05D005591 1.3e-20 103.6 101 57.4
A06p04970 Brassica napus HOM05D004802 ORTHO05D005591 7.2e-19 97.8 113 53.1
SMO228G0088 Selaginella moellendorffii HOM05D004802 ORTHO05D005591 7.2e-19 97.8 86 55.8
A06p04960 Brassica napus HOM05D005594 ORTHO05D006403 2.1e-18 96.3 58 82.8
Haze_26898 Corylus avellana HOM05D004802 ORTHO05D005591 4.1e-14 82.0 124 37.9
MCO15G004 Micromonas commoda HOM05D004802 ORTHO05D005591 9.2e-14 80.9 139 38.8
A09p37440 Brassica napus HOM05D004802 ORTHO05D005591 5.0e-12 75.1 49 75.5
Pp3c14_16960 Physcomitrium patens HOM05D004802 ORTHO05D005591 4.3e-11 72.0 63 55.6
Haze_07453 Corylus avellana HOM05D004802 ORTHO05D005591 1.2e-08 63.9 46 67.4
BcaC02g11004 Brassica carinata HOM05D004802 ORTHO05D005591 9.8e-08 60.8 43 72.1
C04p22280 Brassica napus HOM05D004802 ORTHO05D020149 9.8e-08 60.8 43 72.1
Cfa024847 Carpinus fangiana HOM05D004802 ORTHO05D005591 2.9e-07 59.3 72 45.8
BolC3t13075H Brassica oleracea HOM05D004802 ORTHO05D005591 1.1e-06 57.4 29 86.2
BcaB02g06631 Brassica carinata HOM05D004802 ORTHO05D005591 1.4e-06 57.0 42 69.0
CSS0004783 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 7.0e-06 54.7 62 45.2


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