Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g06512 Brassica carinata HOM05D009982 ORTHO05D006374 4.6e-152 541.2 271 100.0
BolC6t36230H Brassica oleracea HOM05D009982 ORTHO05D006374 2.8e-109 399.1 336 65.5
BcaB05g24055 Brassica carinata HOM05D009982 ORTHO05D006374 7.9e-96 354.4 271 69.7
BcaC04g21764 Brassica carinata HOM05D009982 ORTHO05D006374 5.7e-94 348.2 275 67.6
BolC8t48827H Brassica oleracea HOM05D009982 ORTHO05D006374 1.1e-84 317.4 271 62.4
BolC4t23809H Brassica oleracea HOM05D009982 ORTHO05D006374 6.5e-82 308.1 271 60.5
BolC7t43939H Brassica oleracea HOM05D009982 ORTHO05D006374 3.7e-69 265.8 202 72.8
BolC9t54058H Brassica oleracea HOM05D009982 ORTHO05D006374 3.7e-69 265.8 202 72.8
BolC3t19236H Brassica oleracea HOM05D009982 ORTHO05D006374 3.1e-68 262.7 202 71.3
C02p43110 Brassica napus HOM05D009982 ORTHO05D006374 2.2e-66 256.5 243 57.2
A04p04510 Brassica napus HOM05D009982 ORTHO05D006374 7.7e-59 231.5 168 75.0
BcaC01g01994 Brassica carinata HOM05D009982 ORTHO05D006374 4.9e-53 212.2 174 69.0
C06p11100 Brassica napus HOM05D009982 ORTHO05D006374 6.3e-53 211.8 106 90.6
BolC3t19235H Brassica oleracea HOM05D009982 ORTHO05D006374 3.9e-42 176.0 96 85.4
C03p69750 Brassica napus HOM05D009982 ORTHO05D006374 2.4e-36 156.8 94 87.2
BraA04t16161Z Brassica rapa HOM05D009982 ORTHO05D006374 1.5e-33 147.5 87 85.1
C04p67390 Brassica napus HOM05D009982 ORTHO05D006374 1.2e-30 137.9 69 87.0
BcaB03g13748 Brassica carinata HOM05D009982 ORTHO05D006374 4.9e-29 132.5 210 42.9
C01p39030 Brassica napus HOM05D009982 ORTHO05D006374 4.4e-22 109.4 60 90.0
BcaC08g45112 Brassica carinata HOM05D008134 ORTHO05D006374 3.0e-18 96.7 176 32.4
Sp1g30420 Schrenkiella parvula HOM05D008134 ORTHO05D006374 4.3e-17 92.8 249 27.3
Sp4g09480 Schrenkiella parvula HOM05D009982 ORTHO05D006374 2.8e-16 90.1 76 61.8
BolC3t19237H Brassica oleracea HOM05D009982 ORTHO05D006374 3.6e-16 89.7 47 89.4
BcaC01g01818 Brassica carinata HOM05D007948 ORTHO05D006374 9.0e-15 85.1 225 30.2
BcaB01g05857 Brassica carinata HOM05D015617 ORTHO05D027394 2.9e-13 80.1 319 27.9
BcaC04g21756 Brassica carinata HOM05D007948 ORTHO05D006374 2.9e-13 80.1 79 45.6
SpUn0003_0150 Schrenkiella parvula HOM05D008134 ORTHO05D006374 4.9e-13 79.3 228 26.8
BcaC03g15866 Brassica carinata HOM05D007948 ORTHO05D006374 3.2e-12 76.6 88 43.2
SpUn0089_0010 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.2e-11 74.7 277 22.7
BcaC04g21372 Brassica carinata HOM05D007948 ORTHO05D006374 1.6e-11 74.3 98 40.8
C03p11460 Brassica napus HOM05D008134 ORTHO05D006374 2.7e-11 73.6 72 38.9
C09p41220 Brassica napus HOM05D008134 ORTHO05D006374 2.7e-11 73.6 72 38.9
BolC1t04558H Brassica oleracea HOM05D008134 ORTHO05D006374 2.7e-11 73.6 72 38.9
BcaC04g21528 Brassica carinata HOM05D008134 ORTHO05D006374 3.5e-11 73.2 84 36.9
C06p19630 Brassica napus HOM05D008134 ORTHO05D006374 6.0e-11 72.4 72 38.9
C03p65520 Brassica napus HOM05D008134 ORTHO05D006374 7.8e-11 72.0 72 38.9
C06p15100 Brassica napus HOM05D008134 ORTHO05D006374 1.0e-10 71.6 72 37.5
C01p52120 Brassica napus HOM05D009982 ORTHO05D006374 1.3e-10 71.2 53 69.8
C06p32540 Brassica napus HOM05D023181 ORTHO05D024499 1.3e-10 71.2 60 66.7
BolC6t38376H Brassica oleracea HOM05D023181 ORTHO05D024499 1.3e-10 71.2 60 66.7
BcaNung05563 Brassica carinata HOM05D007948 ORTHO05D006374 2.3e-10 70.5 86 46.5
A07p05790 Brassica napus HOM05D014211 ORTHO05D016021 3.9e-10 69.7 124 40.3
A07p05810 Brassica napus HOM05D014211 ORTHO05D016021 3.9e-10 69.7 124 40.3
C07p16350 Brassica napus HOM05D008134 ORTHO05D006374 5.1e-10 69.3 72 37.5
A07p05640 Brassica napus HOM05D014211 ORTHO05D016021 8.7e-10 68.6 124 40.3
A07p05660 Brassica napus HOM05D014211 ORTHO05D016021 8.7e-10 68.6 124 40.3
BolC2t10247H Brassica oleracea HOM05D008134 ORTHO05D006374 1.9e-09 67.4 97 30.9
Sp4g10030 Schrenkiella parvula HOM05D012607 ORTHO05D014259 1.9e-09 67.4 73 41.1
Sp3g26770 Schrenkiella parvula HOM05D008134 ORTHO05D006374 2.5e-09 67.0 74 41.9
BraA02t08206Z Brassica rapa HOM05D007948 ORTHO05D006374 3.3e-09 66.6 69 42.0
C02p57990 Brassica napus HOM05D023181 ORTHO05D024499 5.6e-09 65.9 60 63.3
BcaC03g15932 Brassica carinata HOM05D007948 ORTHO05D006374 7.3e-09 65.5 97 34.0
A07p05680 Brassica napus HOM05D014211 ORTHO05D016021 7.3e-09 65.5 124 38.7
C04p38260 Brassica napus HOM05D008134 ORTHO05D006374 7.3e-09 65.5 64 35.9
BcaC03g14748 Brassica carinata HOM05D007948 ORTHO05D006374 1.6e-08 64.3 73 37.0
BolC6t38712H Brassica oleracea HOM05D007948 ORTHO05D006374 2.8e-08 63.5 69 39.1
BraA07t28376Z Brassica rapa HOM05D014211 ORTHO05D016021 3.6e-08 63.2 135 37.8
BolC7t40924H Brassica oleracea HOM05D007948 ORTHO05D006374 4.8e-08 62.8 69 40.6
Sp5g20400 Schrenkiella parvula HOM05D008134 ORTHO05D006374 4.8e-08 62.8 94 38.3
BolC2t08062H Brassica oleracea HOM05D008134 ORTHO05D006374 6.2e-08 62.4 64 39.1
BolC2t10321H Brassica oleracea HOM05D007948 ORTHO05D006374 1.1e-07 61.6 88 44.3
Sp2g08160 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.1e-07 61.6 180 28.3
BcaB02g11411 Brassica carinata HOM05D007948 ORTHO05D006374 1.4e-07 61.2 104 33.7
C06p11090 Brassica napus HOM05D009982 ORTHO05D006374 1.4e-07 61.2 53 66.0
Sp1g32050 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.4e-07 61.2 226 25.7
Aa31LG8G12090 Aethionema arabicum HOM05D001220 ORTHO05D000110 5.3e-07 59.3 263 21.7
Sp7g06740 Schrenkiella parvula HOM05D007948 ORTHO05D006374 5.3e-07 59.3 150 29.3
BolC9t57184H Brassica oleracea HOM05D007948 ORTHO05D006374 9.0e-07 58.5 244 25.8
BcaC04g20586 Brassica carinata HOM05D007948 ORTHO05D006374 1.5e-06 57.8 61 44.3
BolC3t17984H Brassica oleracea HOM05D008134 ORTHO05D006374 1.5e-06 57.8 54 35.2
BcaC03g15118 Brassica carinata HOM05D007948 ORTHO05D006374 2.6e-06 57.0 78 42.3
SpUn0901_0010 Schrenkiella parvula HOM05D008134 ORTHO05D006374 2.6e-06 57.0 226 23.0
THA.LOC104813232 Tarenaya hassleriana HOM05D010522 ORTHO05D011833 2.6e-06 57.0 71 35.2
BolC2t08332H Brassica oleracea HOM05D007948 ORTHO05D006374 3.4e-06 56.6 97 29.9
Aa31sc70G40 Aethionema arabicum HOM05D009700 ORTHO05D012032 4.5e-06 56.2 270 25.2
BcaC03g17091 Brassica carinata HOM05D007948 ORTHO05D006374 4.5e-06 56.2 146 27.4
SpUn0011_0060 Schrenkiella parvula HOM05D008134 ORTHO05D006374 4.5e-06 56.2 53 41.5
SpUn0023_0010 Schrenkiella parvula HOM05D008134 ORTHO05D006374 4.5e-06 56.2 53 41.5
A08p28740 Brassica napus HOM05D009700 ORTHO05D001112 5.8e-06 55.8 267 25.5


User provided reference genes

Program Settings