Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g06487 Brassica carinata HOM05D010593 ORTHO05D000411 0.0e+00 1196.8 629 100.0
BcaC05g27340 Brassica carinata HOM05D000496 ORTHO05D017575 8.8e-90 335.5 687 39.0
BcaB07g33864 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-81 305.8 683 36.6
BcaB06g26487 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-79 300.4 678 37.3
BcaB03g16835 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-78 298.5 689 35.6
BcaC06g34627 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-73 280.8 734 33.7
BcaB01g02750 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-73 280.0 723 34.0
BcaC03g15470 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-68 263.8 661 35.6
BcaC07g37144 Brassica carinata HOM05D000496 ORTHO05D012985 2.0e-65 254.6 466 39.5
BcaB01g02686 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-61 241.9 735 30.3
BcaC08g47082 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-61 240.0 764 30.0
BraA03t15653Z Brassica rapa HOM05D010593 ORTHO05D016054 2.0e-57 228.0 648 32.4
BcaC03g14962 Brassica carinata HOM05D021069 ORTHO05D021877 1.1e-55 222.2 763 28.7
BcaC03g17123 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-55 220.3 714 30.8
BcaC07g36881 Brassica carinata HOM05D000496 ORTHO05D027762 6.0e-54 216.5 618 32.7
BcaC05g29655 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-49 201.1 743 28.3
BraA07t28512Z Brassica rapa HOM05D018016 ORTHO05D017575 4.2e-47 193.7 444 35.6
C08p01470 Brassica napus HOM05D011400 ORTHO05D027762 3.0e-37 161.0 467 33.6
BcaB07g32720 Brassica carinata HOM05D000496 ORTHO05D000411 6.2e-35 153.3 650 27.8
BcaB08g36780 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-34 152.1 646 29.3
BcaB01g01758 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-33 147.5 710 27.7
BraA01t02423Z Brassica rapa HOM05D008340 ORTHO05D014933 1.7e-32 145.2 754 27.5
BcaNung06884 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-28 131.3 722 28.0
BcaB07g33233 Brassica carinata HOM05D000496 ORTHO05D000411 9.6e-28 129.4 702 27.6
Thhalv10012285m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 6.9e-26 123.2 149 40.9
C08p01840 Brassica napus HOM05D000496 ORTHO05D000411 9.0e-26 122.9 147 41.5
BolC8t46983H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-25 122.1 147 41.5
BraA02t07982Z Brassica rapa HOM05D010593 ORTHO05D016054 2.0e-25 121.7 474 30.8
CARHR117110 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.7e-24 118.6 136 44.1
BcaC03g17002 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-24 117.9 622 25.9
BcaB07g33775 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-24 117.5 685 26.9
C02p52200 Brassica napus HOM05D011400 ORTHO05D014089 3.8e-24 117.5 614 27.2
BcaC05g25643 Brassica carinata HOM05D012785 ORTHO05D020122 6.4e-24 116.7 151 37.1
BolC4t24448H Brassica oleracea HOM05D010593 ORTHO05D016054 8.4e-24 116.3 481 31.0
BcaC03g15356 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-23 115.2 106 52.8
BcaC02g10576 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-23 114.8 155 37.4
BcaC07g38360 Brassica carinata HOM05D000496 ORTHO05D000411 7.1e-23 113.2 725 26.1
BcaC02g10483 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-22 110.5 672 25.7
Carub.0024s0015 Capsella rubella HOM05D000496 ORTHO05D000411 4.6e-22 110.5 149 35.6
BcaNung03496 Brassica carinata HOM05D000496 ORTHO05D000411 6.0e-22 110.2 356 28.4
CARHR125790 Cardamine hirsuta HOM05D000496 ORTHO05D000411 6.7e-21 106.7 159 35.8
C06p42380 Brassica napus HOM05D011400 ORTHO05D014089 1.5e-20 105.5 609 26.3
BcaC04g22172 Brassica carinata HOM05D000496 ORTHO05D027511 1.9e-20 105.1 662 26.7
CARHR113140 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.9e-20 105.1 124 39.5
A01p26760 Brassica napus HOM05D000496 ORTHO05D000411 2.5e-20 104.8 497 26.0
BcaC02g12683 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-20 104.4 125 44.8
BcaC03g16303 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-20 104.4 97 52.6
BcaC08g44583 Brassica carinata HOM05D000496 ORTHO05D019970 7.4e-20 103.2 638 26.5
CARHR184570 Cardamine hirsuta HOM05D000496 ORTHO05D000411 4.8e-19 100.5 147 33.3
Thhalv10015514m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.8e-18 98.6 161 35.4
BcaC04g21836 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-18 96.7 144 32.6
BcaC01g03819 Brassica carinata HOM05D000496 ORTHO05D039116 9.0e-18 96.3 638 24.3
Thhalv10002827m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.2e-17 95.9 166 34.3
CARHR118460 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.5e-17 95.5 144 34.7
BcaB01g03110 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-17 95.1 143 35.0
Carub.0008s1966 Capsella rubella HOM05D000496 ORTHO05D000411 2.0e-17 95.1 385 25.7
Thhalv10012321m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.0e-17 95.1 161 34.8
BcaNung03207 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-17 94.7 689 24.8
BcaC02g09839 Brassica carinata HOM05D008340 ORTHO05D027352 4.5e-17 94.0 701 24.5
Carub.0003s2750 Capsella rubella HOM05D000496 ORTHO05D000411 5.8e-17 93.6 141 34.8
BcaB05g23841 Brassica carinata HOM05D010593 ORTHO05D096000 1.0e-16 92.8 178 42.7
BcaB08g36546 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-16 92.8 607 23.4
A05p19890 Brassica napus HOM05D000496 ORTHO05D000411 1.3e-16 92.4 143 35.7
BraA01t02446Z Brassica rapa HOM05D000496 ORTHO05D000411 1.3e-16 92.4 143 35.7
BcaC09g48062 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-16 91.7 548 23.4
BcaC01g01997 Brassica carinata HOM05D000496 ORTHO05D027787 2.9e-16 91.3 606 26.2
BcaB04g20795 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-16 90.9 690 23.9
BcaC09g48817 Brassica carinata HOM05D000496 ORTHO05D016100 3.8e-16 90.9 152 30.9
C01p31180 Brassica napus HOM05D008340 ORTHO05D000411 4.9e-16 90.5 613 27.7
BolC1t03052H Brassica oleracea HOM05D008340 ORTHO05D000411 4.9e-16 90.5 613 27.7
BcaB04g17809 Brassica carinata HOM05D000496 ORTHO05D000411 6.5e-16 90.1 119 36.1
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 8.4e-16 89.7 143 34.3
BcaC07g38016 Brassica carinata HOM05D000496 ORTHO05D000411 8.4e-16 89.7 143 33.6
Thhalv10022993m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.4e-15 89.0 141 31.9
A02p13660 Brassica napus HOM05D011362 ORTHO05D018593 1.9e-15 88.6 226 35.8
A06p02910 Brassica napus HOM05D011362 ORTHO05D018593 1.9e-15 88.6 226 35.8
BraA02t08296Z Brassica rapa HOM05D011362 ORTHO05D018593 1.9e-15 88.6 226 35.8
CARHR180340 Cardamine hirsuta HOM05D000496 ORTHO05D000411 2.5e-15 88.2 140 30.7
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-15 87.8 141 34.0
Thhalv10009587m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.2e-15 87.8 132 34.8
Thhalv10009841m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.2e-15 87.4 153 28.8
AL6G45480 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 5.5e-15 87.0 151 32.5
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-14 85.5 143 32.9
Thhalv10028246m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.1e-14 85.1 138 34.1
BcaC09g49093 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-14 84.7 642 26.6
BcaC06g35766 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-14 84.3 143 32.2
BcaC01g00485 Brassica carinata HOM05D000496 ORTHO05D000411 6.0e-14 83.6 155 31.0
BcaC09g49300 Brassica carinata HOM05D000496 ORTHO05D023877 7.9e-14 83.2 136 34.6
C01p40400 Brassica napus HOM05D000496 ORTHO05D023877 7.9e-14 83.2 136 34.6
BcaC08g43609 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-13 82.8 152 30.3
BcaC05g28148 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-13 81.6 543 23.6
BcaB03g15751 Brassica carinata HOM05D000496 ORTHO05D023995 3.0e-13 81.3 667 22.9
BcaC06g35904 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-13 80.9 152 29.6
A09p43600 Brassica napus HOM05D011362 ORTHO05D018593 3.9e-13 80.9 189 38.1
Carub.0007s3143 Capsella rubella HOM05D000496 ORTHO05D000411 6.7e-13 80.1 141 30.5
BcaB06g27750 Brassica carinata HOM05D000496 ORTHO05D000411 8.7e-13 79.7 130 29.2
Carub.0001s1088 Capsella rubella HOM05D000496 ORTHO05D000411 1.1e-12 79.3 152 27.6
BcaC06g36307 Brassica carinata HOM05D008340 ORTHO05D000411 1.5e-12 79.0 660 24.7
SpUn0257_0010 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.5e-12 79.0 141 32.6
C01p36120 Brassica napus HOM05D010593 ORTHO05D016054 1.9e-12 78.6 140 37.9
BolC5t30447H Brassica oleracea HOM05D017968 ORTHO05D020075 2.5e-12 78.2 255 29.8
BcaB03g16361 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-12 77.8 143 31.5
BolC7t41893H Brassica oleracea HOM05D000496 ORTHO05D000411 3.3e-12 77.8 149 31.5
BcaB03g13495 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-12 77.0 652 23.2
BcaC08g42936 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-12 77.0 153 29.4
Thhalv10003487m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.7e-12 77.0 160 33.1
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 7.4e-12 76.6 151 27.8
BcaC07g38676 Brassica carinata HOM05D000496 ORTHO05D000411 9.7e-12 76.3 145 29.0
C05p17450 Brassica napus HOM05D017968 ORTHO05D020075 9.7e-12 76.3 255 29.4
BcaC05g25783 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-11 75.9 134 30.6
BraA01t02440Z Brassica rapa HOM05D010593 ORTHO05D016054 1.3e-11 75.9 640 24.4
BcaB03g15279 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-11 75.5 121 31.4
BolC1t03569H Brassica oleracea HOM05D011362 ORTHO05D018593 1.6e-11 75.5 216 35.6
Thhalv10027529m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.2e-11 75.1 124 32.3
BNapus_Darmor_BZH_scaffold_167p00080 Brassica napus HOM05D000496 ORTHO05D000411 3.7e-11 74.3 135 28.9
C03p14600 Brassica napus HOM05D000496 ORTHO05D000411 3.7e-11 74.3 135 28.9
BolC2t07388H Brassica oleracea HOM05D000496 ORTHO05D000411 3.7e-11 74.3 144 30.6
BcaB08g35130 Brassica carinata HOM05D000496 ORTHO05D000411 4.8e-11 73.9 156 30.1
BcaC09g50123 Brassica carinata HOM05D000496 ORTHO05D000411 4.8e-11 73.9 186 26.9
A06p43710 Brassica napus HOM05D000496 ORTHO05D000411 4.8e-11 73.9 130 31.5
C04p69770 Brassica napus HOM05D004311 ORTHO05D005145 4.8e-11 73.9 128 32.8
BolC1t02804H Brassica oleracea HOM05D000496 ORTHO05D000411 4.8e-11 73.9 186 26.9
BcaC09g51060 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-11 73.2 151 27.8
BolC1t01721H Brassica oleracea HOM05D000496 ORTHO05D000411 8.2e-11 73.2 131 29.8
BolC9t57656H Brassica oleracea HOM05D000496 ORTHO05D000411 1.4e-10 72.4 158 28.5
Aa31sc441G30 Aethionema arabicum HOM05D000496 ORTHO05D000411 1.8e-10 72.0 153 28.8
BolC2t10124H Brassica oleracea HOM05D011362 ORTHO05D039326 1.8e-10 72.0 242 31.0
BcaB06g25900 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-10 71.6 147 26.5
C01p28770 Brassica napus HOM05D000496 ORTHO05D000411 2.4e-10 71.6 186 26.3
BolC7t42883H Brassica oleracea HOM05D000496 ORTHO05D000411 3.1e-10 71.2 130 29.2
BcaC09g49479 Brassica carinata HOM05D011362 ORTHO05D018593 4.1e-10 70.9 161 38.5
BcaC09g50139 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-10 70.9 141 28.4
BcaB04g17647 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-10 70.5 142 28.2
BcaC09g48325 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-10 70.1 134 26.1
Sp1g32850 Schrenkiella parvula HOM05D000496 ORTHO05D000411 9.0e-10 69.7 82 34.1
BcaB01g02479 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-09 69.3 144 26.4
C02p18380 Brassica napus HOM05D010593 ORTHO05D033440 1.2e-09 69.3 302 28.5
BolC7t44560H Brassica oleracea HOM05D000496 ORTHO05D000411 1.2e-09 69.3 77 36.4
CARHR285080 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.5e-09 68.9 73 38.4
BcaB06g29541 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-09 68.6 141 24.8
BcaC06g35182 Brassica carinata HOM05D000496 ORTHO05D017591 2.0e-09 68.6 174 24.7
BolC2t11305H Brassica oleracea HOM05D011400 ORTHO05D014089 2.0e-09 68.6 237 33.3
CARHR150970 Cardamine hirsuta HOM05D000496 ORTHO05D000411 3.4e-09 67.8 172 25.0
BcaB05g24570 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-09 67.4 114 31.6
BcaC01g02555 Brassica carinata HOM05D008340 ORTHO05D000411 4.5e-09 67.4 139 30.2
Thhalv10017646m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.5e-09 67.4 153 26.1
CARHR261370 Cardamine hirsuta HOM05D000496 ORTHO05D000411 5.9e-09 67.0 114 33.3
Thhalv10015686m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.9e-09 67.0 113 29.2
SpUn0025_0070 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.9e-09 67.0 142 31.7
BcaC03g15008 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-09 66.6 621 24.6
BcaC03g15141 Brassica carinata HOM05D010593 ORTHO05D016054 7.7e-09 66.6 161 34.8
BcaC05g27592 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-09 66.6 136 31.6
BolC5t31742H Brassica oleracea HOM05D010593 ORTHO05D033440 7.7e-09 66.6 320 27.8
Carub.0007s3157 Capsella rubella HOM05D000496 ORTHO05D000411 7.7e-09 66.6 154 29.2
BcaB08g35496 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-08 66.2 58 43.1
Thhalv10027498m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.0e-08 66.2 86 38.4
BolC8t48398H Brassica oleracea HOM05D000496 ORTHO05D000411 3.8e-08 64.3 77 36.4
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-08 63.9 628 21.3
BcaC01g01228 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-08 63.2 125 28.0
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-08 63.2 82 35.4
BolC3t21278H Brassica oleracea HOM05D000496 ORTHO05D000411 8.5e-08 63.2 136 27.2
BcaB04g17709 Brassica carinata HOM05D011362 ORTHO05D018593 1.1e-07 62.8 130 36.9
BraA04t16683Z Brassica rapa HOM05D000496 ORTHO05D000411 1.9e-07 62.0 396 24.5
BcaC08g44974 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-07 61.6 136 27.2
BcaC09g48293 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-07 61.6 136 27.2
BcaB01g02832 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-07 61.2 141 23.4
BcaC01g00511 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-07 61.2 136 25.7
BcaC04g22969 Brassica carinata HOM05D008340 ORTHO05D027511 3.2e-07 61.2 637 24.8
BcaC06g33741 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-07 61.2 321 24.9
Thhalv10029191m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.2e-07 61.2 321 23.7
BcaC01g00202 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-07 60.8 133 24.8
BcaNung04981 Brassica carinata HOM05D008340 ORTHO05D000411 5.5e-07 60.5 49 57.1
BcaB04g17071 Brassica carinata HOM05D011400 ORTHO05D014089 7.2e-07 60.1 155 35.5
BolC4t23565H Brassica oleracea HOM05D032206 ORTHO05D018580 7.2e-07 60.1 198 36.9
BolC8t49033H Brassica oleracea HOM05D000496 ORTHO05D000411 7.2e-07 60.1 146 27.4
BcaB01g03090 Brassica carinata HOM05D010593 ORTHO05D091389 1.2e-06 59.3 84 46.4
BcaC05g27524 Brassica carinata HOM05D018016 ORTHO05D017575 2.1e-06 58.5 208 32.2
C05p35020 Brassica napus HOM05D018016 ORTHO05D017575 2.1e-06 58.5 208 32.2
BolC3t21327H Brassica oleracea HOM05D008340 ORTHO05D019970 2.1e-06 58.5 144 43.1
BolC2t08573H Brassica oleracea HOM05D011400 ORTHO05D021877 3.6e-06 57.8 167 33.5
BcaC05g27874 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-06 57.4 124 25.8
BcaB01g04400 Brassica carinata HOM05D000003 ORTHO05D000411 6.1e-06 57.0 134 24.6
BcaB07g32270 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-06 57.0 137 25.5
BcaC04g23534 Brassica carinata HOM05D000003 ORTHO05D000411 6.1e-06 57.0 136 26.5
C01p42910 Brassica napus HOM05D008340 ORTHO05D014933 6.1e-06 57.0 485 25.8
C02p25000 Brassica napus HOM05D010593 ORTHO05D016054 6.1e-06 57.0 149 31.5
BcaB05g24301 Brassica carinata HOM05D000496 ORTHO05D000411 7.9e-06 56.6 315 21.9
BcaC08g43020 Brassica carinata HOM05D000496 ORTHO05D000411 7.9e-06 56.6 140 21.4
BraA02t07554Z Brassica rapa HOM05D000496 ORTHO05D000411 7.9e-06 56.6 134 22.4


User provided reference genes

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