Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g06385 Brassica carinata HOM05D002595 ORTHO05D019982 6.3e-58 227.3 117 100.0
CARHR199020 Cardamine hirsuta HOM05D002595 ORTHO05D003064 7.3e-22 107.5 109 66.1
Sp6g29740 Schrenkiella parvula HOM05D002595 ORTHO05D003064 2.1e-21 105.9 112 63.4
Carub.0006s1250 Capsella rubella HOM05D002595 ORTHO05D003064 1.8e-20 102.8 106 63.2
AT5G14310 Arabidopsis thaliana HOM05D002595 ORTHO05D003064 6.8e-20 100.9 106 63.2
A03p06520 Brassica napus HOM05D002595 ORTHO05D003064 6.8e-20 100.9 89 73.0
C03p07540 Brassica napus HOM05D002595 ORTHO05D003064 6.8e-20 100.9 91 72.5
BolC3t13255H Brassica oleracea HOM05D002595 ORTHO05D003064 6.8e-20 100.9 91 72.5
BraA03t09984Z Brassica rapa HOM05D002595 ORTHO05D003064 6.8e-20 100.9 89 73.0
BcaB01g05122 Brassica carinata HOM05D002595 ORTHO05D003064 2.6e-19 99.0 91 71.4
AL6G25010 Arabidopsis lyrata HOM05D002595 ORTHO05D003064 5.8e-19 97.8 107 61.7
A10p24200 Brassica napus HOM05D002595 ORTHO05D003064 7.5e-19 97.4 100 62.0
BraA10t44483Z Brassica rapa HOM05D002595 ORTHO05D003064 7.5e-19 97.4 100 62.0
BcaB01g06335 Brassica carinata HOM05D002595 ORTHO05D003064 1.3e-18 96.7 91 70.3
BcaB08g36980 Brassica carinata HOM05D002595 ORTHO05D003064 2.9e-18 95.5 100 61.0
BcaB08g36973 Brassica carinata HOM05D002595 ORTHO05D003064 6.4e-18 94.4 102 61.8
BcaB08g36976 Brassica carinata HOM05D002595 ORTHO05D019982 6.4e-18 94.4 102 61.8
C09p62880 Brassica napus HOM05D002595 ORTHO05D003064 8.3e-18 94.0 98 61.2
BolC9t59125H Brassica oleracea HOM05D002595 ORTHO05D003064 8.3e-18 94.0 98 61.2
Aa31LG11G15100 Aethionema arabicum HOM05D002595 ORTHO05D003064 3.2e-17 92.0 97 59.8
Thhalv10013549m.g Eutrema salsugineum HOM05D002595 ORTHO05D003064 7.0e-17 90.9 108 58.3
BcaB08g34920 Brassica carinata HOM05D002595 ORTHO05D019982 6.0e-16 87.8 103 58.3
THA.LOC104821109 Tarenaya hassleriana HOM05D002595 ORTHO05D003064 3.9e-15 85.1 107 55.1
arahy.Tifrunner.gnm1.ann1.Z2IH01 Arachis hypogaea HOM05D002595 ORTHO05D003064 1.2e-11 73.6 89 53.9
arahy.Tifrunner.gnm1.ann1.P4GVCP Arachis hypogaea HOM05D002595 ORTHO05D003064 2.6e-11 72.4 88 53.4
THA.LOC104823965 Tarenaya hassleriana HOM05D002595 ORTHO05D003064 2.6e-11 72.4 83 54.2
Lj1g0011277 Lotus japonicus HOM05D002595 ORTHO05D003064 3.4e-11 72.0 68 58.8
MBI11_g04233_MAGBIO Magnolia biondii HOM05D002595 ORTHO05D003064 4.4e-11 71.6 92 51.1
CARHR148600 Cardamine hirsuta HOM05D002595 ORTHO05D003064 5.8e-11 71.2 76 57.9
Glyma.19G083100 Glycine max HOM05D002595 ORTHO05D003064 5.8e-11 71.2 83 54.2
Lj2g0021680 Lotus japonicus HOM05D002595 ORTHO05D003064 5.8e-11 71.2 79 55.7
AT3G27320 Arabidopsis thaliana HOM05D002595 ORTHO05D003064 7.5e-11 70.9 51 72.5
Carub.0005s0559 Capsella rubella HOM05D002595 ORTHO05D003064 7.5e-11 70.9 51 72.5
Ca_06613_v3 Cicer arietinum L. HOM05D002595 ORTHO05D003064 7.5e-11 70.9 86 51.2
AL5G16550 Arabidopsis lyrata HOM05D002595 ORTHO05D003064 9.9e-11 70.5 51 72.5
BcaC03g17454 Brassica carinata HOM05D002595 ORTHO05D003064 9.9e-11 70.5 96 49.0
A02p35310 Brassica napus HOM05D002595 ORTHO05D003064 9.9e-11 70.5 96 49.0
Duzib147G1347 Durio zibethinus HOM05D002595 ORTHO05D003064 9.9e-11 70.5 92 51.1
Eucgr.I01696 Eucalyptus grandis HOM05D002595 ORTHO05D003064 9.9e-11 70.5 51 72.5
Glyma.05G073200 Glycine max HOM05D002595 ORTHO05D003064 9.9e-11 70.5 81 55.6
Glyma.19G078200 Glycine max HOM05D002595 ORTHO05D003064 1.3e-10 70.1 79 54.4
Phvul.008G149400 Phaseolus vulgaris HOM05D002595 ORTHO05D003064 1.3e-10 70.1 87 51.7
THA.LOC104805346 Tarenaya hassleriana HOM05D002595 ORTHO05D003064 1.3e-10 70.1 84 54.8
Cfa007282 Carpinus fangiana HOM05D002595 ORTHO05D003064 1.7e-10 69.7 51 68.6
Haze_14811 Corylus avellana HOM05D002595 ORTHO05D003064 1.7e-10 69.7 51 68.6
Gohir.A07G225600 Gossypium hirsutum HOM05D002595 ORTHO05D003064 2.9e-10 68.9 82 52.4
Gohir.D07G232800 Gossypium hirsutum HOM05D002595 ORTHO05D003064 2.9e-10 68.9 82 52.4
Gorai.001G268100 Gossypium raimondii HOM05D002595 ORTHO05D003064 2.9e-10 68.9 82 52.4
Aa31LG2G5350 Aethionema arabicum HOM05D002595 ORTHO05D003064 3.7e-10 68.6 105 46.7
C02p54040 Brassica napus HOM05D002595 ORTHO05D003064 3.7e-10 68.6 96 47.9
BolC2t11467H Brassica oleracea HOM05D002595 ORTHO05D003064 3.7e-10 68.6 96 47.9
Gohir.A09G033200 Gossypium hirsutum HOM05D002595 ORTHO05D003064 3.7e-10 68.6 78 53.8
Gohir.D09G033400 Gossypium hirsutum HOM05D002595 ORTHO05D003064 3.7e-10 68.6 78 53.8
Gorai.006G038400 Gossypium raimondii HOM05D002595 ORTHO05D003064 3.7e-10 68.6 78 53.8
VMungo0464G1812 Vigna mungo HOM05D002595 ORTHO05D003064 3.7e-10 68.6 86 50.0
Duzib264G0508 Durio zibethinus HOM05D002595 ORTHO05D003064 4.9e-10 68.2 79 53.2
PGR142G2509 Punica granatum HOM05D002595 ORTHO05D003064 4.9e-10 68.2 87 51.7
QL02p072956 Quercus lobata HOM05D002595 ORTHO05D003064 4.9e-10 68.2 64 57.8
Phvul.004G057500 Phaseolus vulgaris HOM05D002595 ORTHO05D003064 6.4e-10 67.8 102 47.1
Thecc.04G027300 Theobroma cacao HOM05D002595 ORTHO05D003064 6.4e-10 67.8 92 50.0
Gohir.D11G069500 Gossypium hirsutum HOM05D002595 ORTHO05D003064 8.3e-10 67.4 76 52.6
Gorai.007G074300 Gossypium raimondii HOM05D002595 ORTHO05D003064 8.3e-10 67.4 76 52.6
TPR.G14258 Trifolium pratense HOM05D002595 ORTHO05D003064 8.3e-10 67.4 88 50.0
BcaB07g30169 Brassica carinata HOM05D002595 ORTHO05D003064 1.1e-09 67.0 92 50.0
CiPaw.03G050200 Carya illinoinensis HOM05D002595 ORTHO05D003064 1.1e-09 67.0 83 47.0
Glyma.16G062800 Glycine max HOM05D002595 ORTHO05D003064 1.1e-09 67.0 83 55.4
Sp2g16480 Schrenkiella parvula HOM05D002595 ORTHO05D003064 1.1e-09 67.0 85 54.1
CiPaw.04G032800 Carya illinoinensis HOM05D002595 ORTHO05D003064 1.4e-09 66.6 63 57.1
AUR62043093 Chenopodium quinoa HOM05D002595 ORTHO05D003064 1.9e-09 66.2 66 60.6
Ca_04401_v3 Cicer arietinum L. HOM05D002595 ORTHO05D003064 1.9e-09 66.2 99 47.5
TPR.G38497 Trifolium pratense HOM05D002595 ORTHO05D003064 1.9e-09 66.2 63 58.7
Ah.06g187220 Amaranthus hybridus HOM05D002595 ORTHO05D003064 2.4e-09 65.9 63 60.3
BraA02t08534Z Brassica rapa HOM05D002595 ORTHO05D003064 2.4e-09 65.9 82 53.7
ClCG05G013210 Citrullus lanatus HOM05D002595 ORTHO05D003064 3.2e-09 65.5 51 64.7
Ciclev10015160m.g Citrus clementina HOM05D002595 ORTHO05D003064 3.2e-09 65.5 87 50.6
COL.COLO4_29273 Corchorus olitorius HOM05D002595 ORTHO05D003064 3.2e-09 65.5 82 52.4
Manes.17G107500 Manihot esculenta HOM05D002595 ORTHO05D003064 3.2e-09 65.5 51 68.6
Psat1g083800 Pisum sativum HOM05D002595 ORTHO05D003064 3.2e-09 65.5 83 48.2
arahy.Tifrunner.gnm1.ann1.27IYZ4 Arachis hypogaea HOM05D002595 ORTHO05D003064 4.1e-09 65.1 54 66.7
arahy.Tifrunner.gnm1.ann1.K0B4U2 Arachis hypogaea HOM05D002595 ORTHO05D003064 4.1e-09 65.1 54 66.7
Sed0027789 Sechium edule HOM05D002595 ORTHO05D003064 4.1e-09 65.1 101 43.6
ATR0686G165 Amborella trichopoda HOM05D002595 ORTHO05D003064 5.4e-09 64.7 72 54.2
Lalb_Chr06g0174431 Lupinus albus HOM05D002595 ORTHO05D003064 5.4e-09 64.7 49 65.3
Psat3g177160 Pisum sativum HOM05D002595 ORTHO05D003064 5.4e-09 64.7 77 50.6
Hma1.2p1_0079F.1_g041550 Hydrangea macrophylla HOM05D002595 ORTHO05D003064 7.1e-09 64.3 47 66.0
Hma1.2p1_0279F.1_g112240 Hydrangea macrophylla HOM05D002595 ORTHO05D003064 7.1e-09 64.3 88 47.7
CsaV3_3G027340 Cucumis sativus L. HOM05D002595 ORTHO05D003064 9.2e-09 63.9 99 46.5
Duzib187G1481 Durio zibethinus HOM05D002595 ORTHO05D003064 9.2e-09 63.9 91 49.5
TWI36G1450 Tripterygium wilfordii HOM05D002595 ORTHO05D003064 9.2e-09 63.9 102 49.0
TAR371G0102 Trochodendron aralioides HOM05D002595 ORTHO05D003064 9.2e-09 63.9 49 67.3
AUR62040975 Chenopodium quinoa HOM05D002595 ORTHO05D003064 1.2e-08 63.5 89 51.7
Sc16g0003710 Simmondsia chinensis HOM05D002595 ORTHO05D003064 1.6e-08 63.2 75 56.0
TAR622G0483 Trochodendron aralioides HOM05D002595 ORTHO05D003064 1.6e-08 63.2 50 62.0
MELO3C014849.2 Cucumis melo HOM05D002595 ORTHO05D003064 2.1e-08 62.8 99 46.5
Atru.chr6.2484 Acer truncatum HOM05D002595 ORTHO05D003064 2.7e-08 62.4 98 46.9
Actinidia05945 Actinidia chinensis HOM05D002595 ORTHO05D003064 2.7e-08 62.4 98 43.9
Dinv14781 Davidia involucrata HOM05D002595 ORTHO05D003064 2.7e-08 62.4 50 62.0
HanXRQChr09g0255611 Helianthus annuus HOM05D002595 ORTHO05D003064 3.5e-08 62.0 57 52.6
EL10Ac4g08620 Beta vulgaris HOM05D002595 ORTHO05D003064 4.6e-08 61.6 64 54.7
Cfa006461 Carpinus fangiana HOM05D002595 ORTHO05D019982 4.6e-08 61.6 51 60.8
Lalb_Chr02g0157961 Lupinus albus HOM05D002595 ORTHO05D003064 4.6e-08 61.6 88 47.7
Ah.04g163490 Amaranthus hybridus HOM05D002595 ORTHO05D003064 6.0e-08 61.2 84 50.0
CSS0021573 Camellia sinensis var. sinensis HOM05D002595 ORTHO05D003064 6.0e-08 61.2 54 57.4
DCAR_011287 Daucus carota HOM05D002595 ORTHO05D003064 6.0e-08 61.2 55 60.0
Aqoxy5G03561 Aquilegia oxysepala HOM05D002595 ORTHO05D003064 7.8e-08 60.8 82 51.2
HanXRQChr15g0487101 Helianthus annuus HOM05D002595 ORTHO05D003064 7.8e-08 60.8 62 53.2
VMungo1383G1165 Vigna mungo HOM05D002595 ORTHO05D003064 7.8e-08 60.8 75 49.3
CDE04G0207 Ceratophyllum demersum HOM05D002595 ORTHO05D003064 1.0e-07 60.5 90 48.9
MD09G1017600 Malus domestica HOM05D002595 ORTHO05D003064 1.0e-07 60.5 95 44.2
Rhsim10G0011400 Rhododendron simsii HOM05D002595 ORTHO05D003064 1.0e-07 60.5 106 41.5
Hund06715 Selenicereus undatus HOM05D002595 ORTHO05D003064 1.0e-07 60.5 51 68.6
Dinv33386 Davidia involucrata HOM05D002595 ORTHO05D003064 1.3e-07 60.1 113 41.6
Gohir.A10G160650 Gossypium hirsutum HOM05D002595 ORTHO05D003064 1.3e-07 60.1 82 51.2
Prupe.3G299300 Prunus persica HOM05D002595 ORTHO05D003064 1.3e-07 60.1 95 45.3
Sed0005830 Sechium edule HOM05D002595 ORTHO05D003064 1.3e-07 60.1 92 44.6
CDE07G2020 Ceratophyllum demersum HOM05D002595 ORTHO05D003064 1.7e-07 59.7 103 46.6
FvH4_6g52540 Fragaria vesca HOM05D002595 ORTHO05D003064 1.7e-07 59.7 91 49.5
FAN02G1781 Fragaria x ananassa HOM05D002595 ORTHO05D003064 1.7e-07 59.7 92 48.9
FAN05G1312 Fragaria x ananassa HOM05D002595 ORTHO05D003064 1.7e-07 59.7 91 49.5
FAN14G2773 Fragaria x ananassa HOM05D002595 ORTHO05D003064 1.7e-07 59.7 91 49.5
SalBow2G2415 Salvia bowleyana HOM05D002595 ORTHO05D003064 1.7e-07 59.7 60 56.7
CSS0034257 Camellia sinensis var. sinensis HOM05D002595 ORTHO05D003064 2.3e-07 59.3 89 46.1
Nn3g16569 Nelumbo nucifera HOM05D002595 ORTHO05D003064 2.3e-07 59.3 83 43.4
CAN.G473.56 Capsicum annuum HOM05D002595 ORTHO05D003064 3.0e-07 58.9 91 48.4
DCAR_007022 Daucus carota HOM05D002595 ORTHO05D003064 3.0e-07 58.9 46 65.2
Gohir.D10G085300 Gossypium hirsutum HOM05D002595 ORTHO05D003064 3.9e-07 58.5 105 44.8
Gorai.011G093200 Gossypium raimondii HOM05D002595 ORTHO05D003064 3.9e-07 58.5 105 44.8
MD17G1018400 Malus domestica HOM05D002595 ORTHO05D003064 3.9e-07 58.5 95 44.2
RcHm_v2.0_Chr2g0174131 Rosa chinensis HOM05D002595 ORTHO05D003064 3.9e-07 58.5 76 48.7
Sabra08G0137800 Salix brachista HOM05D002595 ORTHO05D003064 3.9e-07 58.5 52 50.0
SHI03782 Sapria himalayana HOM05D000415 ORTHO05D003064 3.9e-07 58.5 60 55.0
vmacro05921 Vaccinium macrocarpon HOM05D002595 ORTHO05D003064 3.9e-07 58.5 83 45.8
CSS0012604 Camellia sinensis var. sinensis HOM05D002595 ORTHO05D003064 5.1e-07 58.2 89 44.9
Cc07_g00380 Coffea canephora HOM05D002595 ORTHO05D003064 5.1e-07 58.2 101 43.6
Hma1.2p1_1484F.1_g286370 Hydrangea macrophylla HOM05D002595 ORTHO05D003064 5.1e-07 58.2 92 45.7
Lsat_1_v5_gn_4_183821 Lactuca sativa HOM05D002595 ORTHO05D003064 5.1e-07 58.2 99 42.4
Lju41A46G88 Lonicera japonica HOM05D002595 ORTHO05D003064 5.1e-07 58.2 62 53.2
Aqoxy3G01426 Aquilegia oxysepala HOM05D002595 ORTHO05D003064 6.6e-07 57.8 45 60.0
FAN09G3487 Fragaria x ananassa HOM05D002595 ORTHO05D003064 6.6e-07 57.8 92 47.8
Manes.03G089503 Manihot esculenta HOM05D002595 ORTHO05D003064 6.6e-07 57.8 75 46.7
Manes.13G093250 Manihot esculenta HOM05D002595 ORTHO05D003064 6.6e-07 57.8 75 46.7
Nitab4.5_0001863g0160 Nicotiana tabacum HOM05D002595 ORTHO05D003064 6.6e-07 57.8 79 53.2
Nn4g22448 Nelumbo nucifera HOM05D002595 ORTHO05D003064 8.6e-07 57.4 60 50.0
PSO063G7243 Papaver somniferum HOM05D002595 ORTHO05D003064 8.6e-07 57.4 46 63.0
PSO782G3866 Papaver somniferum HOM05D002595 ORTHO05D003064 8.6e-07 57.4 46 63.0
Potri.008G180600 Populus trichocarpa HOM05D002595 ORTHO05D003064 8.6e-07 57.4 52 50.0
DCAR_015076 Daucus carota HOM05D002595 ORTHO05D003064 1.1e-06 57.0 101 42.6
Migut.K00681 Erythranthe guttata HOM05D002595 ORTHO05D003064 1.1e-06 57.0 54 59.3
Manes.13G013700 Manihot esculenta HOM05D002595 ORTHO05D003064 1.1e-06 57.0 75 46.7
Oeu049168.1 Olea europaea HOM05D002595 ORTHO05D003064 1.1e-06 57.0 68 57.4
Gohir.A05G342033 Gossypium hirsutum HOM05D002595 ORTHO05D003064 1.5e-06 56.6 64 54.7
Sabra08G0137700 Salix brachista HOM05D002595 ORTHO05D003064 1.5e-06 56.6 72 45.8
SGA_v2.0_scaffold154G37151 Striga asiatica HOM05D002595 ORTHO05D003064 1.5e-06 56.6 99 43.4
Potri.008G180500 Populus trichocarpa HOM05D002595 ORTHO05D003064 1.9e-06 56.2 59 47.5
SalBow1G1494 Salvia bowleyana HOM05D002595 ORTHO05D003064 1.9e-06 56.2 80 47.5
GSVIVG01003964001 Vitis vinifera HOM05D002595 ORTHO05D003064 1.9e-06 56.2 96 44.8
CSS0000027 Camellia sinensis var. sinensis HOM05D002595 ORTHO05D003064 4.3e-06 55.1 60 50.0
Gohir.D04G080100 Gossypium hirsutum HOM05D002595 ORTHO05D003064 4.3e-06 55.1 64 53.1
Medtr6g022710 Medicago truncatula HOM05D002595 ORTHO05D003064 4.3e-06 55.1 95 44.2
Actinidia36163 Actinidia chinensis HOM05D002595 ORTHO05D003064 5.6e-06 54.7 58 55.2
CDE09G0279 Ceratophyllum demersum HOM05D002595 ORTHO05D003064 5.6e-06 54.7 79 45.6
COL.COLO4_23567 Corchorus olitorius HOM05D002595 ORTHO05D003064 5.6e-06 54.7 49 53.1
HanXRQChr17g0540081 Helianthus annuus HOM05D002595 ORTHO05D003064 5.6e-06 54.7 59 52.5
Nitab4.5_0001318g0070 Nicotiana tabacum HOM05D002595 ORTHO05D003064 5.6e-06 54.7 51 62.7
Peaxi162Scf00700g00226 Petunia axillaris HOM05D002595 ORTHO05D003064 5.6e-06 54.7 82 48.8
CAN.G70.1 Capsicum annuum HOM05D002595 ORTHO05D003064 7.3e-06 54.3 54 55.6
Gorai.012G091000 Gossypium raimondii HOM05D002595 ORTHO05D003064 7.3e-06 54.3 64 53.1
Oeu048590.1 Olea europaea HOM05D002595 ORTHO05D003064 7.3e-06 54.3 92 43.5
MSTRG.534 Avicennia marina HOM05D002595 ORTHO05D003064 9.5e-06 53.9 47 63.8
CAN.G904.6 Capsicum annuum HOM05D002595 ORTHO05D003064 9.5e-06 53.9 54 55.6
Nitab4.5_0008949g0020 Nicotiana tabacum HOM05D002595 ORTHO05D003064 9.5e-06 53.9 80 48.8


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