Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g06114 Brassica carinata HOM05D000127 ORTHO05D091257 7.2e-50 200.3 102 100.0
C03p00290 Brassica napus HOM05D000127 ORTHO05D011592 9.4e-34 146.7 102 79.4
BolC3t12599H Brassica oleracea HOM05D000127 ORTHO05D011592 9.4e-34 146.7 102 79.4
A03p00140 Brassica napus HOM05D000127 ORTHO05D011592 2.1e-33 145.6 102 78.4
BraA03t09404Z Brassica rapa HOM05D000127 ORTHO05D011592 2.1e-33 145.6 102 78.4
Sp6g40950 Schrenkiella parvula HOM05D000127 ORTHO05D011592 1.0e-27 126.7 102 68.6
Thhalv10012769m.g Eutrema salsugineum HOM05D000127 ORTHO05D011592 2.9e-27 125.2 102 66.7
AT5G01690 Arabidopsis thaliana HOM05D000127 ORTHO05D011592 2.5e-26 122.1 102 63.7
AL6G10360 Arabidopsis lyrata HOM05D000127 ORTHO05D011592 3.0e-24 115.2 102 59.8
Carub.0006s0015 Capsella rubella HOM05D000127 ORTHO05D011592 4.0e-24 114.8 102 63.7
CARHR212050 Cardamine hirsuta HOM05D000127 ORTHO05D011592 6.8e-24 114.0 102 59.8
Aa31LG1G23310 Aethionema arabicum HOM05D000127 ORTHO05D011592 1.6e-20 102.8 78 64.1
THA.LOC104827059 Tarenaya hassleriana HOM05D000127 ORTHO05D011592 5.8e-15 84.3 61 65.6
Aa31LG1G23300 Aethionema arabicum HOM05D000127 ORTHO05D011592 1.1e-10 70.1 76 51.3
CARHR212040 Cardamine hirsuta HOM05D000127 ORTHO05D011592 4.7e-09 64.7 68 50.0
Sp6g40940 Schrenkiella parvula HOM05D000127 ORTHO05D011592 4.7e-09 64.7 68 48.5
Thhalv10015355m.g Eutrema salsugineum HOM05D000127 ORTHO05D011592 6.2e-09 64.3 68 50.0
Atru.chr8.2343 Acer truncatum HOM05D000127 ORTHO05D000243 1.1e-08 63.5 63 54.0
AL6G10370 Arabidopsis lyrata HOM05D000127 ORTHO05D011592 1.8e-08 62.8 68 48.5
AT5G01680 Arabidopsis thaliana HOM05D000127 ORTHO05D011592 1.8e-08 62.8 68 48.5
RcHm_v2.0_Chr5g0071771 Rosa chinensis HOM05D000127 ORTHO05D000243 5.2e-08 61.2 65 44.6
FAN21G1114 Fragaria x ananassa HOM05D000127 ORTHO05D000243 2.0e-07 59.3 65 44.6
vmacro20329 Vaccinium macrocarpon HOM05D000127 ORTHO05D000243 4.4e-07 58.2 58 50.0
FAN11G0129 Fragaria x ananassa HOM05D000127 ORTHO05D000243 5.8e-07 57.8 65 43.1
FAN16G0379 Fragaria x ananassa HOM05D000127 ORTHO05D000243 5.8e-07 57.8 65 43.1
FAN25G2671 Fragaria x ananassa HOM05D000127 ORTHO05D000243 5.8e-07 57.8 60 43.3
TWI79G1183 Tripterygium wilfordii HOM05D000127 ORTHO05D000243 2.9e-06 55.5 74 40.5
Haze_24421 Corylus avellana HOM05D000127 ORTHO05D000243 6.4e-06 54.3 80 35.0
Prupe.6G047700 Prunus persica HOM05D000127 ORTHO05D000243 8.3e-06 53.9 78 37.2


User provided reference genes

Program Settings