Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05936 Brassica carinata HOM05D009681 ORTHO05D013235 1.2e-144 516.5 269 100.0
C01p52730 Brassica napus HOM05D009681 ORTHO05D013235 3.3e-102 375.6 340 67.4
C03p44900 Brassica napus HOM05D009681 ORTHO05D013235 6.4e-90 334.7 312 66.7
C03p14360 Brassica napus HOM05D009681 ORTHO05D013235 8.4e-90 334.3 325 64.6
BcaC01g03734 Brassica carinata HOM05D009681 ORTHO05D013235 3.9e-87 325.5 331 61.6
C07p46450 Brassica napus HOM05D009681 ORTHO05D013235 4.5e-75 285.4 289 63.3
BcaC04g22727 Brassica carinata HOM05D009681 ORTHO05D013235 5.9e-75 285.0 286 61.2
BcaC06g33339 Brassica carinata HOM05D009681 ORTHO05D013235 2.1e-72 276.6 289 62.3
BcaC02g10860 Brassica carinata HOM05D009681 ORTHO05D013235 1.1e-70 270.8 158 90.5
BcaC01g04122 Brassica carinata HOM05D009681 ORTHO05D013235 4.8e-61 238.8 234 63.7
BcaC07g39469 Brassica carinata HOM05D009681 ORTHO05D013235 7.9e-56 221.5 317 53.0
A09p45490 Brassica napus HOM05D009681 ORTHO05D013235 1.8e-55 220.3 138 86.2
BraA09t40010Z Brassica rapa HOM05D009681 ORTHO05D013235 5.2e-55 218.8 138 85.5
BcaB03g15520 Brassica carinata HOM05D009681 ORTHO05D013235 3.3e-54 216.1 155 74.8
BcaB01g05725 Brassica carinata HOM05D009681 ORTHO05D092449 3.8e-42 176.0 98 91.8
C09p15890 Brassica napus HOM05D009681 ORTHO05D013235 3.1e-36 156.4 85 91.8
BolC8t49161H Brassica oleracea HOM05D009681 ORTHO05D013235 7.5e-30 135.2 203 47.8
BolC1t05210H Brassica oleracea HOM05D009681 ORTHO05D013235 1.3e-29 134.4 199 48.7
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 3.2e-20 103.2 139 45.3
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 5.4e-20 102.4 141 46.8
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 9.2e-20 101.7 139 45.3
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 4.6e-19 99.4 141 46.1
A01p18710 Brassica napus HOM05D007694 ORTHO05D018628 2.3e-18 97.1 107 55.1
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 8.6e-18 95.1 106 53.8
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 1.9e-17 94.0 107 53.3
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 3.3e-17 93.2 149 43.6
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 3.3e-17 93.2 149 43.6
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 3.3e-17 93.2 149 43.6
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 9.5e-17 91.7 139 40.3
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 9.5e-17 91.7 105 53.3
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 1.2e-16 91.3 98 56.1
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 1.2e-16 91.3 94 56.4
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 1.6e-16 90.9 137 41.6
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 2.1e-16 90.5 105 52.4
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 2.1e-16 90.5 147 42.9
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 2.8e-16 90.1 108 48.1
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 2.8e-16 90.1 139 39.6
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 2.8e-16 90.1 139 39.6
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 6.2e-16 89.0 108 47.2
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 6.2e-16 89.0 91 56.0
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 6.2e-16 89.0 108 47.2
BraA09t39372Z Brassica rapa HOM05D007694 ORTHO05D018628 6.2e-16 89.0 133 41.4
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 8.0e-16 88.6 147 42.2
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 8.0e-16 88.6 148 43.2
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 8.0e-16 88.6 147 42.2
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 8.0e-16 88.6 91 54.9
BolC7t43276H Brassica oleracea HOM05D007694 ORTHO05D019969 8.0e-16 88.6 148 43.2
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 8.0e-16 88.6 105 50.5
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 4.0e-15 86.3 137 40.1
C07p27460 Brassica napus HOM05D007694 ORTHO05D019969 4.0e-15 86.3 148 42.6
C03p13860 Brassica napus HOM05D007694 ORTHO05D019969 5.2e-15 85.9 148 42.6
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 6.8e-15 85.5 148 42.6
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 6.8e-15 85.5 117 46.2
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 1.2e-14 84.7 136 43.4
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 2.0e-14 84.0 168 38.7
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 2.0e-14 84.0 103 48.5
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 2.0e-14 84.0 168 38.7
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 2.0e-14 84.0 125 43.2
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 1.3e-13 81.3 136 41.9
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 2.9e-13 80.1 132 40.2
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 2.9e-13 80.1 132 40.2
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 3.2e-12 76.6 86 50.0
C08p15330 Brassica napus HOM05D009681 ORTHO05D013235 6.0e-11 72.4 35 97.1
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 1.9e-09 67.4 146 37.0
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 5.6e-09 65.9 142 37.3
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 9.5e-09 65.1 145 38.6
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 2.6e-06 57.0 67 46.3
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 2.6e-06 57.0 67 46.3
A02p13980 Brassica napus HOM05D007694 ORTHO05D098099 5.8e-06 55.8 56 55.4


User provided reference genes

Program Settings