Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05899 Brassica carinata HOM05D005700 ORTHO05D007035 6.2e-49 197.2 104 100.0
C03p02060 Brassica napus HOM05D005700 ORTHO05D007035 1.6e-44 182.6 94 100.0
BolC3t12759H Brassica oleracea HOM05D005700 ORTHO05D007035 5.1e-43 177.6 93 97.8
C09p72310 Brassica napus HOM05D005700 ORTHO05D007035 5.6e-42 174.1 93 94.6
BolC9t59975H Brassica oleracea HOM05D005700 ORTHO05D007035 5.6e-42 174.1 93 94.6
Thhalv10014494m.g Eutrema salsugineum HOM05D005700 ORTHO05D007035 5.6e-42 174.1 93 94.6
AL6G14080 Arabidopsis lyrata HOM05D005700 ORTHO05D007035 9.6e-42 173.3 93 93.5
A10p31640 Brassica napus HOM05D005700 ORTHO05D007035 2.8e-41 171.8 93 93.5
BraA10t45210Z Brassica rapa HOM05D005700 ORTHO05D007035 2.8e-41 171.8 93 93.5
BcaC06g32152 Brassica carinata HOM05D005700 ORTHO05D007035 4.8e-41 171.0 93 93.5
Sp6g38300 Schrenkiella parvula HOM05D005700 ORTHO05D007035 1.1e-40 169.9 93 91.4
THA.LOC104823196 Tarenaya hassleriana HOM05D005700 ORTHO05D007035 3.9e-35 151.4 93 82.8
Ciclev10032582m.g Citrus clementina HOM05D005700 ORTHO05D007035 2.1e-33 145.6 93 76.3
CiPaw.01G265100 Carya illinoinensis HOM05D005700 ORTHO05D007035 8.1e-33 143.7 93 77.4
Gohir.D04G021400 Gossypium hirsutum HOM05D005700 ORTHO05D007035 8.1e-33 143.7 93 76.3
Nitab4.5_0000096g0200 Nicotiana tabacum HOM05D005700 ORTHO05D007035 1.8e-32 142.5 93 75.3
Migut.F01676 Erythranthe guttata HOM05D005700 ORTHO05D007035 2.4e-32 142.1 93 74.2
Gohir.A05G393500 Gossypium hirsutum HOM05D005700 ORTHO05D007035 2.4e-32 142.1 93 75.3
Sopen05g033880 Solanum pennellii HOM05D005700 ORTHO05D007035 4.0e-32 141.4 93 75.3
Hma1.2p1_0454F.1_g156230 Hydrangea macrophylla HOM05D005700 ORTHO05D007035 5.3e-32 141.0 93 73.1
CAN.G1891.6 Capsicum annuum HOM05D005700 ORTHO05D007035 6.9e-32 140.6 93 74.2
SGA_v2.0_scaffold41G15744 Striga asiatica HOM05D005700 ORTHO05D007035 9.0e-32 140.2 93 74.2
CSS0024490 Camellia sinensis var. sinensis HOM05D005700 ORTHO05D007035 1.2e-31 139.8 93 75.3
PGSC0003DMG400023376 Solanum tuberosum HOM05D005700 ORTHO05D007035 1.5e-31 139.4 93 74.2
Peaxi162Scf01201g00017 Petunia axillaris HOM05D005700 ORTHO05D007035 2.6e-31 138.7 93 73.1
TWI38G0818 Tripterygium wilfordii HOM05D005700 ORTHO05D007035 2.6e-31 138.7 93 72.0
Atru.chr12.910 Acer truncatum HOM05D005700 ORTHO05D007035 3.4e-31 138.3 93 74.2
ECA238G2005 Erigeron canadensis HOM05D005700 ORTHO05D007035 3.4e-31 138.3 93 71.0
Manes.11G085375 Manihot esculenta HOM05D005700 ORTHO05D007035 3.4e-31 138.3 93 74.2
Cfa001774 Carpinus fangiana HOM05D005700 ORTHO05D007035 4.5e-31 137.9 93 72.0
Cpa.g.sc53.169 Carica papaya HOM05D005700 ORTHO05D007035 7.6e-31 137.1 93 73.1
Lj2A24T67 Lonicera japonica HOM05D005700 ORTHO05D007035 1.0e-30 136.7 94 74.5
A03p01690 Brassica napus HOM05D005700 ORTHO05D007035 1.3e-30 136.3 72 97.2
Haze_16777 Corylus avellana HOM05D005700 ORTHO05D007035 1.3e-30 136.3 93 72.0
HanXRQChr14g0456161 Helianthus annuus HOM05D005700 ORTHO05D007035 1.3e-30 136.3 94 71.3
Lalb_Chr01g0010291 Lupinus albus HOM05D005700 ORTHO05D007035 1.3e-30 136.3 93 72.0
Actinidia38892 Actinidia chinensis HOM05D005700 ORTHO05D007035 2.2e-30 135.6 93 72.0
Solyc05g055430.4 Solanum lycopersicum HOM05D005700 ORTHO05D007035 2.2e-30 135.6 93 72.0
PSO063G2079 Papaver somniferum HOM05D005700 ORTHO05D007035 2.9e-30 135.2 93 69.9
PSO339G4237 Papaver somniferum HOM05D005700 ORTHO05D007035 2.9e-30 135.2 93 69.9
Potri.010G230900 Populus trichocarpa HOM05D005700 ORTHO05D007035 2.9e-30 135.2 93 72.0
QL08p053081 Quercus lobata HOM05D005700 ORTHO05D007035 4.9e-30 134.4 92 71.7
Rhsim09G0145300 Rhododendron simsii HOM05D005700 ORTHO05D007035 4.9e-30 134.4 93 71.0
GSVIVG01016163001 Vitis vinifera HOM05D005700 ORTHO05D007035 4.9e-30 134.4 93 69.9
arahy.Tifrunner.gnm1.ann1.U7ZK73 Arachis hypogaea HOM05D005700 ORTHO05D007035 6.5e-30 134.0 92 71.7
BraA03t09544Z Brassica rapa HOM05D005700 ORTHO05D007035 6.5e-30 134.0 72 97.2
SalBow6G6710 Salvia bowleyana HOM05D005700 ORTHO05D007035 6.5e-30 134.0 93 69.9
Lj1g0010858 Lotus japonicus HOM05D005700 ORTHO05D007035 1.4e-29 132.9 93 69.9
Lj1g0018185 Lotus japonicus HOM05D005700 ORTHO05D007035 1.4e-29 132.9 93 69.9
Sc20g0001510 Simmondsia chinensis HOM05D005700 ORTHO05D007035 1.4e-29 132.9 93 68.8
MELO3C019851.2 Cucumis melo HOM05D005700 ORTHO05D007035 1.9e-29 132.5 93 71.0
HanXRQChr11g0335951 Helianthus annuus HOM05D005700 ORTHO05D007035 1.9e-29 132.5 93 67.7
Sabra10G0179000 Salix brachista HOM05D005700 ORTHO05D007035 1.9e-29 132.5 93 71.0
Actinidia34788 Actinidia chinensis HOM05D005700 ORTHO05D007035 3.2e-29 131.7 93 69.9
PGR142G0169 Punica granatum HOM05D005700 ORTHO05D007035 3.2e-29 131.7 93 71.0
AUR62022764 Chenopodium quinoa HOM05D005700 ORTHO05D007035 4.2e-29 131.3 92 70.7
MBI19_g03561_MAGBIO Magnolia biondii HOM05D005700 ORTHO05D007035 7.1e-29 130.6 92 68.5
Hund06763 Selenicereus undatus HOM05D005700 ORTHO05D007035 7.1e-29 130.6 101 67.3
Nn6g35199 Nelumbo nucifera HOM05D005700 ORTHO05D007035 9.3e-29 130.2 93 66.7
Prupe.2G094500 Prunus persica HOM05D005700 ORTHO05D007035 9.3e-29 130.2 93 67.7
CiPaw.02G170000 Carya illinoinensis HOM05D005700 ORTHO05D007035 1.2e-28 129.8 90 71.1
RcHm_v2.0_Chr1g0336111 Rosa chinensis HOM05D005700 ORTHO05D007035 1.2e-28 129.8 93 67.7
Medtr1g050530 Medicago truncatula HOM05D005700 ORTHO05D007035 1.6e-28 129.4 93 66.7
Phvul.007G244000 Phaseolus vulgaris HOM05D005700 ORTHO05D007035 1.6e-28 129.4 93 67.7
Gorai.012G025500 Gossypium raimondii HOM05D005700 ORTHO05D007035 2.1e-28 129.0 117 59.8
Psat6g095240 Pisum sativum HOM05D005700 ORTHO05D007035 2.1e-28 129.0 93 67.7
vmacro10263 Vaccinium macrocarpon HOM05D005700 ORTHO05D007035 2.1e-28 129.0 93 68.8
EL10Ac4g08634 Beta vulgaris HOM05D005700 ORTHO05D007035 2.7e-28 128.6 93 68.8
AUR62029215 Chenopodium quinoa HOM05D005700 ORTHO05D007035 2.7e-28 128.6 92 69.6
Sed0026830 Sechium edule HOM05D005700 ORTHO05D007035 3.5e-28 128.3 93 69.9
Potri.008G030300 Populus trichocarpa HOM05D005700 ORTHO05D007035 4.6e-28 127.9 93 66.7
AT5G04440 Arabidopsis thaliana HOM05D005700 ORTHO05D007035 6.0e-28 127.5 72 88.9
CANSAT56G1373 Cannabis sativa HOM05D005700 ORTHO05D007035 1.0e-27 126.7 94 71.3
Ca_26010_v3 Cicer arietinum L. HOM05D005700 ORTHO05D007035 1.0e-27 126.7 93 65.6
Sed0005120 Sechium edule HOM05D005700 ORTHO05D007035 1.0e-27 126.7 93 67.7
CDE09G1384 Ceratophyllum demersum HOM05D005700 ORTHO05D007035 1.8e-27 125.9 93 65.6
Zm00001eb003780 Zea mays HOM05D005700 ORTHO05D007035 2.3e-27 125.6 93 65.6
MSTRG.400 Avicennia marina HOM05D005700 ORTHO05D007035 3.0e-27 125.2 93 66.7
Aqoxy1G01068 Aquilegia oxysepala HOM05D005700 ORTHO05D007035 3.9e-27 124.8 93 66.7
MD07G1074500 Malus domestica HOM05D005700 ORTHO05D007035 3.9e-27 124.8 93 66.7
SEGI_13772 Sequoiadendron giganteum HOM05D005700 ORTHO05D007035 5.1e-27 124.4 93 66.7
HPP92_004967 Vanilla planifolia HOM05D005700 ORTHO05D007035 1.5e-26 122.9 93 64.5
Cc02_g10560 Coffea canephora HOM05D005700 ORTHO05D007035 1.9e-26 122.5 93 63.4
SMO196G0037 Selaginella moellendorffii HOM05D005700 ORTHO05D007035 1.9e-26 122.5 93 64.5
Carub.0006s0338 Capsella rubella HOM05D005700 ORTHO05D007035 3.3e-26 121.7 69 88.4
unitig_749.g13568 Utricularia gibba HOM05D005700 ORTHO05D007035 3.3e-26 121.7 113 61.9
BcaB01g05900 Brassica carinata HOM05D005700 ORTHO05D007035 4.3e-26 121.3 65 96.9
Aa31LG11G5310 Aethionema arabicum HOM05D005700 ORTHO05D007035 9.6e-26 120.2 75 81.3
ATR0043G051 Amborella trichopoda HOM05D005700 ORTHO05D007035 2.8e-25 118.6 93 59.1
Lsat_1_v5_gn_2_103220 Lactuca sativa HOM05D005700 ORTHO05D007035 3.7e-25 118.2 94 62.8
AagrBONN_evm.TU.Sc2ySwM_228.955 Anthoceros agrestis HOM05D005700 ORTHO05D007035 1.1e-24 116.7 93 60.2
MBI11_g29032_MAGBIO Magnolia biondii HOM05D005700 ORTHO05D007035 4.1e-24 114.8 99 60.6
Mapoly0083s0065 Marchantia polymorpha HOM05D005700 ORTHO05D007035 1.0e-22 110.2 93 54.8
CBR_g10878 Chara braunii HOM05D005700 ORTHO05D007035 1.7e-22 109.4 90 57.8
Pp3c1_19240 Physcomitrium patens HOM05D005700 ORTHO05D007035 3.8e-22 108.2 93 53.8
FAN03G2335 Fragaria x ananassa HOM05D005700 ORTHO05D007035 2.1e-20 102.4 166 39.8
Hma1.2p1_0454F.1_g156240 Hydrangea macrophylla HOM05D005700 ORTHO05D007035 3.9e-19 98.2 72 65.3
Thecc.10G089800 Theobroma cacao HOM05D005700 ORTHO05D007035 3.9e-19 98.2 71 67.6
TAR369G0971 Trochodendron aralioides HOM05D005700 ORTHO05D007035 3.9e-19 98.2 69 69.6
Duzib106G0901 Durio zibethinus HOM05D005700 ORTHO05D007035 8.7e-19 97.1 69 68.1
FAN10G0584 Fragaria x ananassa HOM05D005700 ORTHO05D007035 1.1e-18 96.7 180 36.7
Oeu046658.1 Olea europaea HOM05D005700 ORTHO05D007035 1.9e-18 95.9 72 63.9
Dinv31263 Davidia involucrata HOM05D005700 ORTHO05D007035 4.3e-18 94.7 74 64.9
FvH4_7g06650 Fragaria vesca HOM05D005700 ORTHO05D007035 5.7e-18 94.4 74 60.8
Nn3g19086 Nelumbo nucifera HOM05D005700 ORTHO05D007035 1.6e-17 92.8 77 59.7
COL.COLO4_32883 Corchorus olitorius HOM05D005700 ORTHO05D007035 3.7e-17 91.7 70 68.6
CSS0044057 Camellia sinensis var. sinensis HOM05D005700 ORTHO05D007035 4.8e-17 91.3 85 56.5
arahy.Tifrunner.gnm1.ann1.PLH1MA Arachis hypogaea HOM05D005700 ORTHO05D007035 1.4e-16 89.7 77 62.3
VMungo0720G2730 Vigna mungo HOM05D005700 ORTHO05D007035 6.9e-16 87.4 70 61.4
CSS0017585 Camellia sinensis var. sinensis HOM05D005700 ORTHO05D007035 1.2e-15 86.7 72 62.5
Glyma.10G102440 Glycine max HOM05D005700 ORTHO05D007035 1.5e-15 86.3 70 60.0
Glyma.U031112 Glycine max HOM05D005700 ORTHO05D007035 1.5e-15 86.3 70 60.0
ClCG08G007920 Citrullus lanatus HOM05D005700 ORTHO05D007035 2.6e-15 85.5 68 64.7
CSS0044078 Camellia sinensis var. sinensis HOM05D005700 ORTHO05D007035 5.9e-15 84.3 68 64.7
MBI11_g23276_MAGBIO Magnolia biondii HOM05D005700 ORTHO05D007035 2.9e-14 82.0 68 60.3
PRCOL_00003535 Prasinoderma coloniale HOM05D005700 ORTHO05D007035 8.5e-14 80.5 89 49.4
Cre06.g264550 Chlamydomonas reinhardtii HOM05D005700 ORTHO05D007035 1.1e-10 70.1 74 43.2
PRCOL_00001490 Prasinoderma coloniale HOM05D005700 ORTHO05D007035 9.7e-10 67.0 79 41.8
BcaNung07228 Brassica carinata HOM05D005700 ORTHO05D007035 4.1e-08 61.6 38 81.6
MCO14G381 Micromonas commoda HOM05D005700 ORTHO05D007035 9.1e-08 60.5 84 42.9
ECA233G6102 Erigeron canadensis HOM05D005700 ORTHO05D007035 1.0e-06 57.0 40 60.0


User provided reference genes

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