Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05857 Brassica carinata HOM05D015617 ORTHO05D027394 1.9e-179 632.5 343 100.0
C03p69450 Brassica napus HOM05D015617 ORTHO05D039604 2.3e-44 183.7 249 53.4
A07p15050 Brassica napus HOM05D015617 ORTHO05D027394 4.9e-34 149.4 97 73.2
BcaC01g02019 Brassica carinata HOM05D015617 ORTHO05D027394 2.3e-31 140.6 75 93.3
BcaB06g27993 Brassica carinata HOM05D015617 ORTHO05D091904 5.6e-30 136.0 135 58.5
BcaC07g37084 Brassica carinata HOM05D015617 ORTHO05D027394 1.2e-29 134.8 75 90.7
BcaC08g44012 Brassica carinata HOM05D015617 ORTHO05D094866 1.6e-29 134.4 62 100.0
BcaC01g02018 Brassica carinata HOM05D015617 ORTHO05D039604 1.3e-21 108.2 65 86.2
BcaB05g24055 Brassica carinata HOM05D009982 ORTHO05D006374 9.0e-20 102.1 147 40.1
BcaC04g21528 Brassica carinata HOM05D008134 ORTHO05D006374 3.4e-19 100.1 88 47.7
BolC8t48827H Brassica oleracea HOM05D009982 ORTHO05D006374 4.4e-19 99.8 157 37.6
BolC4t23809H Brassica oleracea HOM05D009982 ORTHO05D006374 1.2e-16 91.7 147 36.1
C02p43110 Brassica napus HOM05D009982 ORTHO05D006374 1.7e-15 87.8 147 35.4
BcaC08g45112 Brassica carinata HOM05D008134 ORTHO05D006374 2.3e-15 87.4 80 45.0
SpUn0003_0150 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.9e-14 84.3 206 28.6
C03p11460 Brassica napus HOM05D008134 ORTHO05D006374 3.3e-14 83.6 74 44.6
C09p41220 Brassica napus HOM05D008134 ORTHO05D006374 3.3e-14 83.6 74 44.6
BolC1t04558H Brassica oleracea HOM05D008134 ORTHO05D006374 3.3e-14 83.6 74 44.6
BcaB02g06512 Brassica carinata HOM05D009982 ORTHO05D006374 4.3e-14 83.2 319 27.9
C06p19630 Brassica napus HOM05D008134 ORTHO05D006374 4.3e-14 83.2 74 44.6
C03p65520 Brassica napus HOM05D008134 ORTHO05D006374 9.6e-14 82.0 74 44.6
C06p15100 Brassica napus HOM05D008134 ORTHO05D006374 1.3e-13 81.6 74 43.2
C07p16350 Brassica napus HOM05D008134 ORTHO05D006374 6.2e-13 79.3 74 43.2
BolC2t10247H Brassica oleracea HOM05D008134 ORTHO05D006374 6.2e-13 79.3 92 41.3
BcaC04g21764 Brassica carinata HOM05D009982 ORTHO05D006374 8.1e-13 79.0 179 31.8
BcaC03g17091 Brassica carinata HOM05D007948 ORTHO05D006374 1.8e-12 77.8 112 34.8
C04p38260 Brassica napus HOM05D008134 ORTHO05D006374 2.0e-11 74.3 64 43.8
BcaB02g11411 Brassica carinata HOM05D007948 ORTHO05D006374 3.4e-11 73.6 118 32.2
BolC2t08062H Brassica oleracea HOM05D008134 ORTHO05D006374 4.5e-11 73.2 67 44.8
Sp1g30420 Schrenkiella parvula HOM05D008134 ORTHO05D006374 4.5e-11 73.2 280 23.9
Sp3g26770 Schrenkiella parvula HOM05D008134 ORTHO05D006374 7.6e-11 72.4 75 42.7
BolC9t57184H Brassica oleracea HOM05D007948 ORTHO05D006374 1.3e-10 71.6 79 36.7
C04p67390 Brassica napus HOM05D009982 ORTHO05D006374 2.2e-10 70.9 69 42.0
BolC3t17984H Brassica oleracea HOM05D008134 ORTHO05D006374 2.9e-10 70.5 56 48.2
Sp4g10030 Schrenkiella parvula HOM05D012607 ORTHO05D014259 9.3e-09 65.5 79 38.0
BcaC03g15932 Brassica carinata HOM05D007948 ORTHO05D006374 1.6e-08 64.7 87 33.3
BcaC04g21372 Brassica carinata HOM05D007948 ORTHO05D006374 1.3e-07 61.6 180 26.1
BolC6t38712H Brassica oleracea HOM05D007948 ORTHO05D006374 1.3e-07 61.6 77 33.8
BcaC03g14748 Brassica carinata HOM05D007948 ORTHO05D006374 1.8e-07 61.2 99 32.3
BolC8t48430H Brassica oleracea HOM05D011111 ORTHO05D001112 2.3e-07 60.8 104 30.8
BolC3t19235H Brassica oleracea HOM05D009982 ORTHO05D006374 3.0e-07 60.5 104 34.6
Sp2g08160 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.1e-06 58.5 53 43.4
BolC2t08332H Brassica oleracea HOM05D007948 ORTHO05D006374 2.5e-06 57.4 102 30.4


User provided reference genes

Program Settings