Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05830 Brassica carinata HOM05D010121 ORTHO05D018475 2.0e-56 222.2 115 100.0
C03p01580 Brassica napus HOM05D010121 ORTHO05D018475 2.5e-51 205.3 107 100.0
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 3.3e-51 204.9 106 100.0
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 3.3e-51 204.9 106 100.0
BcaNung03085 Brassica carinata HOM05D010121 ORTHO05D018475 1.3e-44 183.0 95 100.0
BcaB01g05815 Brassica carinata HOM05D010121 ORTHO05D018475 3.8e-31 138.3 107 72.9
BcaC06g33025 Brassica carinata HOM05D010121 ORTHO05D018475 3.8e-31 138.3 107 72.9
C03p15900 Brassica napus HOM05D010121 ORTHO05D013201 3.9e-12 75.1 112 47.3
BolC3t14021H Brassica oleracea HOM05D010121 ORTHO05D013201 3.9e-12 75.1 112 47.3
AL6G13010 Arabidopsis lyrata HOM05D000279 ORTHO05D013201 5.1e-12 74.7 112 43.8
BcaB01g04496 Brassica carinata HOM05D010121 ORTHO05D013201 7.4e-11 70.9 105 46.7
Sp4g24600 Schrenkiella parvula HOM05D000279 ORTHO05D000498 7.4e-11 70.9 98 42.9
BraA02t04767Z Brassica rapa HOM05D010121 ORTHO05D013201 1.3e-10 70.1 136 40.4
CARHR137500 Cardamine hirsuta HOM05D000279 ORTHO05D000498 1.3e-10 70.1 98 41.8
BcaC03g13002 Brassica carinata HOM05D010121 ORTHO05D013201 2.2e-10 69.3 136 39.7
C02p01150 Brassica napus HOM05D010121 ORTHO05D013201 2.2e-10 69.3 136 39.7
BolC2t06105H Brassica oleracea HOM05D010121 ORTHO05D013201 2.2e-10 69.3 136 39.7
Carub.0004s2486 Capsella rubella HOM05D000279 ORTHO05D000498 3.7e-10 68.6 107 41.1
BcaB06g29246 Brassica carinata HOM05D000279 ORTHO05D000498 8.2e-10 67.4 102 40.2
BcaB01g05816 Brassica carinata HOM05D000279 ORTHO05D000498 1.1e-09 67.0 107 41.1
A08p10750 Brassica napus HOM05D010121 ORTHO05D013201 1.1e-09 67.0 113 43.4
BraA08t33072Z Brassica rapa HOM05D010121 ORTHO05D013201 1.1e-09 67.0 113 43.4
Carub.0006s0236 Capsella rubella HOM05D000279 ORTHO05D018475 1.1e-09 67.0 105 41.9
Thhalv10014790m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 4.1e-09 65.1 95 43.2
AL4G40910 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 5.3e-09 64.7 107 38.3
AL4G40950 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 5.3e-09 64.7 103 41.7
BcaB01g05831 Brassica carinata HOM05D000279 ORTHO05D000498 6.9e-09 64.3 114 36.8
C03p01570 Brassica napus HOM05D000279 ORTHO05D000498 6.9e-09 64.3 114 36.8
AL4G41010 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 9.1e-09 63.9 80 47.5
AT2G42465 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 9.1e-09 63.9 103 40.8
C03p13040 Brassica napus HOM05D010121 ORTHO05D013201 9.1e-09 63.9 97 44.3
C04p69710 Brassica napus HOM05D000279 ORTHO05D000498 9.1e-09 63.9 102 38.2
CARHR209780 Cardamine hirsuta HOM05D000279 ORTHO05D018475 9.1e-09 63.9 105 40.0
BcaB06g29247 Brassica carinata HOM05D000279 ORTHO05D000498 1.2e-08 63.5 102 39.2
BcaNung05221 Brassica carinata HOM05D000279 ORTHO05D000498 1.2e-08 63.5 102 39.2
A04p32220 Brassica napus HOM05D000279 ORTHO05D000498 1.2e-08 63.5 102 39.2
BraA04t18676Z Brassica rapa HOM05D000279 ORTHO05D000498 1.2e-08 63.5 102 39.2
A04p32230 Brassica napus HOM05D000279 ORTHO05D000498 1.5e-08 63.2 102 39.2
BraA04t18677Z Brassica rapa HOM05D000279 ORTHO05D000498 1.5e-08 63.2 102 39.2
BcaB06g29249 Brassica carinata HOM05D000279 ORTHO05D000498 2.0e-08 62.8 98 37.8
C03p14160 Brassica napus HOM05D010121 ORTHO05D013201 3.4e-08 62.0 79 49.4
BolC4t28471H Brassica oleracea HOM05D000279 ORTHO05D000498 3.4e-08 62.0 102 38.2
BcaNung05222 Brassica carinata HOM05D000279 ORTHO05D000498 7.7e-08 60.8 101 36.6
BolC4t28470H Brassica oleracea HOM05D000279 ORTHO05D000498 7.7e-08 60.8 101 36.6
A04p32240 Brassica napus HOM05D000279 ORTHO05D000498 1.0e-07 60.5 112 36.6
C04p69720 Brassica napus HOM05D000279 ORTHO05D000498 2.2e-07 59.3 102 37.3
A05p02990 Brassica napus HOM05D000279 ORTHO05D000498 2.9e-07 58.9 99 38.4
CARHR168720 Cardamine hirsuta HOM05D000279 ORTHO05D000498 3.8e-07 58.5 108 35.2
AL4G41020 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 6.5e-07 57.8 87 41.4
BolC3t13766H Brassica oleracea HOM05D010121 ORTHO05D013201 8.5e-07 57.4 92 42.4
Sp4g24610 Schrenkiella parvula HOM05D000279 ORTHO05D000498 1.1e-06 57.0 67 46.3
AL6G13000 Arabidopsis lyrata HOM05D010121 ORTHO05D013201 1.4e-06 56.6 92 43.5
AL4G40960 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 1.9e-06 56.2 102 39.2
Thhalv10023996m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 2.5e-06 55.8 104 34.6
C03p28200 Brassica napus HOM05D000279 ORTHO05D000498 3.2e-06 55.5 107 32.7
BolC3t13860H Brassica oleracea HOM05D010121 ORTHO05D013201 3.2e-06 55.5 104 40.4
BolC3t15191H Brassica oleracea HOM05D000279 ORTHO05D000498 3.2e-06 55.5 107 32.7
BraA09t40546Z Brassica rapa HOM05D000279 ORTHO05D000498 3.2e-06 55.5 110 37.3
A03p23650 Brassica napus HOM05D000279 ORTHO05D000498 4.2e-06 55.1 107 32.7
BraA03t11581Z Brassica rapa HOM05D000279 ORTHO05D000498 4.2e-06 55.1 107 32.7
AL2G15770 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 5.5e-06 54.7 97 36.1
BcaB01g03449 Brassica carinata HOM05D000279 ORTHO05D000498 5.5e-06 54.7 87 39.1
BcaB06g29248 Brassica carinata HOM05D000279 ORTHO05D000498 5.5e-06 54.7 73 41.1
BcaNung05220 Brassica carinata HOM05D000279 ORTHO05D000498 5.5e-06 54.7 73 41.1
A10p23460 Brassica napus HOM05D000279 ORTHO05D000498 5.5e-06 54.7 108 34.3
Carub.0004s2492 Capsella rubella HOM05D000279 ORTHO05D000498 5.5e-06 54.7 75 44.0
CARHR168620 Cardamine hirsuta HOM05D000279 ORTHO05D000498 5.5e-06 54.7 82 39.0
Thhalv10024153m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 5.5e-06 54.7 88 36.4
AL4G40940 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 7.2e-06 54.3 108 34.3
AL4G41000 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 7.2e-06 54.3 86 39.5
AL5G40080 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 7.2e-06 54.3 96 39.6
AT3G58260 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 7.2e-06 54.3 95 36.8
BcaC01g05284 Brassica carinata HOM05D000279 ORTHO05D000498 7.2e-06 54.3 87 39.1
A09p51010 Brassica napus HOM05D000279 ORTHO05D000498 7.2e-06 54.3 110 37.3
C04p69730 Brassica napus HOM05D000279 ORTHO05D000498 7.2e-06 54.3 73 39.7
CARHR137510 Cardamine hirsuta HOM05D000279 ORTHO05D000498 7.2e-06 54.3 108 34.3
CARHR168700 Cardamine hirsuta HOM05D000279 ORTHO05D000498 7.2e-06 54.3 108 36.1
Sp5g04500 Schrenkiella parvula HOM05D000279 ORTHO05D000498 7.2e-06 54.3 98 38.8
BolC9t59008H Brassica oleracea HOM05D000279 ORTHO05D000498 9.4e-06 53.9 108 33.3
BraA10t44413Z Brassica rapa HOM05D000279 ORTHO05D000498 9.4e-06 53.9 108 34.3
Thhalv10024005m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 9.4e-06 53.9 99 33.3


User provided reference genes

Program Settings