Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05491 Brassica carinata HOM05D008824 ORTHO05D003125 4.9e-79 297.7 151 100.0
BolC3t13066H Brassica oleracea HOM05D008824 ORTHO05D003125 4.9e-79 297.7 151 100.0
BcaB01g06316 Brassica carinata HOM05D008824 ORTHO05D003125 4.7e-74 281.2 151 94.7
Thhalv10016092m.g Eutrema salsugineum HOM05D008824 ORTHO05D003125 1.4e-70 269.6 153 87.6
A03p04850 Brassica napus HOM05D008824 ORTHO05D003125 2.1e-69 265.8 151 91.4
BraA03t09824Z Brassica rapa HOM05D008824 ORTHO05D003125 2.1e-69 265.8 151 91.4
C03p05580 Brassica napus HOM05D008824 ORTHO05D003125 3.0e-68 261.9 151 92.1
AL6G21690 Arabidopsis lyrata HOM05D008824 ORTHO05D003125 1.5e-67 259.6 154 83.8
Sp6g32430 Schrenkiella parvula HOM05D008824 ORTHO05D003125 2.4e-65 252.3 151 87.4
AT5G11070 Arabidopsis thaliana HOM05D008824 ORTHO05D003125 2.2e-63 245.7 156 82.1
BcaNung07098 Brassica carinata HOM05D008824 ORTHO05D003125 2.7e-61 238.8 154 83.8
Carub.0006s0958 Capsella rubella HOM05D008824 ORTHO05D003125 7.9e-61 237.3 165 79.4
BcaNung01909 Brassica carinata HOM05D008824 ORTHO05D003125 2.3e-60 235.7 151 82.1
BcaNung01911 Brassica carinata HOM05D008824 ORTHO05D003125 2.3e-60 235.7 151 82.1
Aa31LG3G16070 Aethionema arabicum HOM05D008824 ORTHO05D003125 4.3e-59 231.5 153 77.1
A10p26630 Brassica napus HOM05D008824 ORTHO05D003125 4.0e-57 224.9 153 82.4
C09p65790 Brassica napus HOM05D008824 ORTHO05D003125 4.0e-57 224.9 153 82.4
CARHR202220 Cardamine hirsuta HOM05D008824 ORTHO05D003125 9.0e-57 223.8 159 78.0
BcaC04g19263 Brassica carinata HOM05D008824 ORTHO05D003125 1.2e-56 223.4 153 82.4
BolC9t59401H Brassica oleracea HOM05D008824 ORTHO05D003125 1.2e-56 223.4 153 82.4
BraA02t05065Z Brassica rapa HOM05D008824 ORTHO05D003125 1.2e-56 223.4 152 79.6
BraA10t44721Z Brassica rapa HOM05D008824 ORTHO05D003125 5.8e-56 221.1 153 82.4
A02p00820 Brassica napus HOM05D008824 ORTHO05D003125 8.7e-44 180.6 122 78.7
BcaC03g13348 Brassica carinata HOM05D008824 ORTHO05D003125 7.4e-43 177.6 133 71.4
C02p04840 Brassica napus HOM05D008824 ORTHO05D003125 7.4e-43 177.6 133 71.4
BolC2t06442H Brassica oleracea HOM05D008824 ORTHO05D003125 3.7e-42 175.3 133 69.9
THA.LOC104815009 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 2.4e-41 172.6 149 61.7
THA.LOC104814116 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 5.5e-38 161.4 150 62.0
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 1.3e-15 87.0 138 42.8
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 6.5e-15 84.7 138 42.0
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 2.5e-14 82.8 142 42.3
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 1.6e-13 80.1 151 36.4
Manes.16G125900 Manihot esculenta HOM05D008824 ORTHO05D003125 4.7e-13 78.6 146 36.3
Manes.03G012100 Manihot esculenta HOM05D003969 ORTHO05D003125 1.5e-11 73.6 158 32.9
Sabra18G0025300 Salix brachista HOM05D008824 ORTHO05D003125 7.5e-11 71.2 149 34.9
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 6.3e-10 68.2 140 35.7
Atru.chr7.2498 Acer truncatum HOM05D003969 ORTHO05D003125 1.4e-09 67.0 148 37.8
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.4e-09 67.0 132 34.1
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.4e-09 66.2 132 36.4
Potri.003G070750 Populus trichocarpa HOM05D008824 ORTHO05D003125 7.0e-09 64.7 148 31.8
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 9.1e-09 64.3 134 38.1
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 9.1e-09 64.3 142 33.8
Cpa.g.sc187.25 Carica papaya HOM05D008824 ORTHO05D003125 2.0e-08 63.2 130 36.9
ClCG08G013530 Citrullus lanatus HOM05D008824 ORTHO05D003125 4.5e-08 62.0 129 34.9
Potri.006G259200 Populus trichocarpa HOM05D008824 ORTHO05D003125 4.5e-08 62.0 152 32.2
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 1.3e-07 60.5 123 36.6
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 1.3e-07 60.5 116 37.1
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.3e-07 60.5 130 33.8
Sabra06G0202600 Salix brachista HOM05D008824 ORTHO05D003125 2.9e-07 59.3 151 30.5
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 3.8e-07 58.9 139 32.4
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 5.0e-07 58.5 134 31.3
Lalb_Chr24g0402081 Lupinus albus HOM05D013068 ORTHO05D003125 8.5e-07 57.8 111 35.1
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 1.5e-06 57.0 115 33.0
MELO3C030306.2 Cucumis melo HOM05D008824 ORTHO05D003125 1.9e-06 56.6 92 44.6
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 2.5e-06 56.2 145 31.7
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 2.5e-06 56.2 140 30.7
Gorai.009G060100 Gossypium raimondii HOM05D003969 ORTHO05D003125 2.5e-06 56.2 130 33.8
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.5e-06 56.2 131 31.3
Eucgr.C01687 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.2e-06 55.8 90 41.1
Gohir.A05G056900 Gossypium hirsutum HOM05D003969 ORTHO05D003125 4.2e-06 55.5 150 30.0
FAN20G0523 Fragaria x ananassa HOM05D019695 ORTHO05D022679 5.5e-06 55.1 62 50.0
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 5.5e-06 55.1 144 31.2
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 7.2e-06 54.7 97 38.1
Gohir.D05G059000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 7.2e-06 54.7 130 33.1
MBI14_g03633_MAGBIO Magnolia biondii HOM05D003969 ORTHO05D003125 7.2e-06 54.7 143 33.6
Eucgr.C01632 Eucalyptus grandis HOM05D003969 ORTHO05D003125 9.4e-06 54.3 90 41.1
Eucgr.C01699 Eucalyptus grandis HOM05D003969 ORTHO05D003125 9.4e-06 54.3 90 41.1
FvH4_2g28320 Fragaria vesca HOM05D019695 ORTHO05D022679 9.4e-06 54.3 62 50.0
FAN24G2106 Fragaria x ananassa HOM05D019695 ORTHO05D022679 9.4e-06 54.3 62 50.0
FAN27G0582 Fragaria x ananassa HOM05D019695 ORTHO05D022679 9.4e-06 54.3 62 50.0


User provided reference genes

Program Settings