Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05477 Brassica carinata HOM05D004021 ORTHO05D003767 0.0e+00 1864.4 964 100.0
BolC3t13094H Brassica oleracea HOM05D004021 ORTHO05D003767 0.0e+00 1725.7 1008 91.8
BraA03t09842Z Brassica rapa HOM05D004021 ORTHO05D003767 0.0e+00 1687.5 1008 89.9
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 0.0e+00 1187.2 942 72.9
Sp6g32070 Schrenkiella parvula HOM05D004021 ORTHO05D003767 0.0e+00 1150.6 1134 63.5
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 0.0e+00 1100.5 939 68.9
AL6G22200 Arabidopsis lyrata HOM05D004021 ORTHO05D003767 9.4e-301 1036.9 1136 59.4
Carub.0006s1000 Capsella rubella HOM05D004021 ORTHO05D003767 7.7e-295 1017.3 1130 58.8
BcaNung01931 Brassica carinata HOM05D004021 ORTHO05D003767 4.5e-287 991.5 1065 58.9
AT5G11530 Arabidopsis thaliana HOM05D004021 ORTHO05D003767 1.3e-286 989.9 1134 57.7
CARHR201690 Cardamine hirsuta HOM05D004021 ORTHO05D003767 3.0e-278 962.2 1123 56.8
BcaC03g13370 Brassica carinata HOM05D004021 ORTHO05D003767 3.0e-270 935.6 1040 58.1
C02p05090 Brassica napus HOM05D004021 ORTHO05D003767 3.0e-270 935.6 1040 58.1
BolC2t06463H Brassica oleracea HOM05D004021 ORTHO05D003767 1.5e-269 933.3 1039 58.0
BraA02t05084Z Brassica rapa HOM05D004021 ORTHO05D003767 1.3e-265 920.2 1043 57.5
A02p01040 Brassica napus HOM05D004021 ORTHO05D003767 1.1e-264 917.1 1043 57.4
Aa31LG3G15670 Aethionema arabicum HOM05D004021 ORTHO05D003767 1.6e-228 797.0 1165 49.7
Thhalv10015703m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 1.0e-185 654.8 1086 45.3
THA.LOC104814779 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 1.4e-171 607.8 1190 42.0
Thhalv10003568m.g Eutrema salsugineum HOM05D004021 ORTHO05D003767 3.6e-167 593.2 1123 41.5
THA.LOC104799199 Tarenaya hassleriana HOM05D004021 ORTHO05D003767 1.3e-161 574.7 1195 40.6
Aa31LG11G4580 Aethionema arabicum HOM05D004021 ORTHO05D003767 8.9e-142 508.8 1087 39.7
A06p36400 Brassica napus HOM05D004021 ORTHO05D003767 6.4e-132 476.1 1109 38.3
BraA06t26563Z Brassica rapa HOM05D004021 ORTHO05D003767 1.9e-131 474.6 1108 38.1
BcaNung03924 Brassica carinata HOM05D004021 ORTHO05D003767 9.3e-131 472.2 1104 38.6
BolC7t44742H Brassica oleracea HOM05D004021 ORTHO05D003767 1.6e-130 471.5 1104 38.6
C07p42110 Brassica napus HOM05D004021 ORTHO05D003767 2.7e-130 470.7 1104 38.5
BraA10t44680Z Brassica rapa HOM05D018796 ORTHO05D023922 1.5e-59 235.7 1270 26.4
Ciclev10007267m.g Citrus clementina HOM05D004021 ORTHO05D003767 1.2e-45 189.5 1233 25.6
C09p65300 Brassica napus HOM05D018796 ORTHO05D023922 1.0e-44 186.4 1185 25.9
BolC9t59357H Brassica oleracea HOM05D018796 ORTHO05D023922 1.3e-44 186.0 1208 25.7
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 2.1e-42 178.7 1265 26.3
COL.COLO4_18677 Corchorus olitorius HOM05D004021 ORTHO05D003767 8.0e-42 176.8 1265 25.8
Thecc.09G042000 Theobroma cacao HOM05D004021 ORTHO05D003767 3.1e-41 174.9 1283 26.6
BcaC04g19217 Brassica carinata HOM05D018796 ORTHO05D023922 6.8e-41 173.7 1148 25.5
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 1.5e-40 172.6 1263 26.3
A10p26230 Brassica napus HOM05D018796 ORTHO05D023922 9.8e-40 169.9 1213 24.8
Gohir.A07G023100 Gossypium hirsutum HOM05D004021 ORTHO05D003767 2.9e-39 168.3 1257 25.5
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 6.4e-39 167.2 1263 25.7
BcaB08g37050 Brassica carinata HOM05D018796 ORTHO05D003767 4.6e-37 161.0 1048 26.0
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.0e-36 159.8 1252 24.7
BcaNung04838 Brassica carinata HOM05D004021 ORTHO05D003767 3.3e-35 154.8 279 45.5
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 4.3e-35 154.5 1260 25.2
Gorai.001G027700 Gossypium raimondii HOM05D004021 ORTHO05D003767 4.3e-35 154.5 1252 24.4
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 3.6e-34 151.4 1249 25.3
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 5.2e-33 147.5 1272 24.2
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 2.6e-32 145.2 1295 23.9
Duzib168G2343 Durio zibethinus HOM05D004021 ORTHO05D003767 5.8e-32 144.1 1224 25.2
Manes.16G071666 Manihot esculenta HOM05D004021 ORTHO05D003767 8.3e-31 140.2 1290 23.8
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 1.9e-30 139.0 1292 23.3
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 9.2e-30 136.7 1274 24.5
TPR.G1392 Trifolium pratense HOM05D004021 ORTHO05D003767 4.6e-29 134.4 1178 25.2
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 8.6e-28 130.2 1274 24.3
GSVIVG01035651001 Vitis vinifera HOM05D004021 ORTHO05D003767 2.5e-27 128.6 860 25.7
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 3.3e-27 128.3 1275 23.8
FAN27G1714 Fragaria x ananassa HOM05D004021 ORTHO05D003767 5.6e-27 127.5 1274 24.2
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 8.1e-26 123.6 1281 24.7
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 6.8e-25 120.6 1299 23.6
Lj1g0012897 Lotus japonicus HOM05D004021 ORTHO05D003767 1.2e-24 119.8 1223 23.8
BcaB08g37051 Brassica carinata HOM05D018796 ORTHO05D003767 2.6e-24 118.6 391 32.2
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 1.9e-22 112.5 1279 23.7
Prupe.1G450900 Prunus persica HOM05D004021 ORTHO05D003767 9.2e-22 110.2 1265 24.0
Gohir.D07G026600 Gossypium hirsutum HOM05D004021 ORTHO05D003767 1.2e-21 109.8 680 27.8
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 2.1e-21 109.0 1326 24.1
MELO3C003457.2 Cucumis melo HOM05D004021 ORTHO05D003767 2.1e-21 109.0 1121 22.6
Ca_15608_v3 Cicer arietinum L. HOM05D004021 ORTHO05D003767 1.0e-20 106.7 1172 24.8
Glyma.06G083500 Glycine max HOM05D004021 ORTHO05D003767 1.3e-20 106.3 1180 23.5
CsaV3_3G048630 Cucumis sativus L. HOM05D004021 ORTHO05D003767 2.3e-20 105.5 1158 22.5
Cpa.g.sc7.254 Carica papaya HOM05D004021 ORTHO05D003767 3.0e-20 105.1 100 51.0
arahy.Tifrunner.gnm1.ann1.QM1LQ0 Arachis hypogaea HOM05D004021 ORTHO05D003767 6.6e-20 104.0 1215 23.5
Psat5g022840 Pisum sativum HOM05D004021 ORTHO05D003767 8.7e-20 103.6 1196 23.3
Glyma.04G081800 Glycine max HOM05D004021 ORTHO05D003767 9.6e-19 100.1 1177 24.0
Psat5g022920 Pisum sativum HOM05D004021 ORTHO05D003767 8.1e-18 97.1 1213 23.9
Medtr3g110082 Medicago truncatula HOM05D004021 ORTHO05D003767 4.0e-17 94.7 1169 24.2
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 1.2e-16 93.2 91 48.4
Medtr3g110132 Medicago truncatula HOM05D004021 ORTHO05D003767 1.5e-16 92.8 1185 24.2
VMungo1309G0329 Vigna mungo HOM05D004021 ORTHO05D003767 1.5e-16 92.8 1212 22.8
SGA_v2.0_scaffold169G38653 Striga asiatica HOM05D004021 ORTHO05D003767 2.0e-16 92.4 990 22.9
SHI18661 Sapria himalayana HOM05D004021 ORTHO05D003767 5.8e-16 90.9 972 24.1
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 9.9e-16 90.1 1162 22.8
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 3.8e-15 88.2 98 48.0
DCAR_007709 Daucus carota HOM05D004021 ORTHO05D003767 4.9e-15 87.8 1057 23.2
Lalb_Chr08g0243171 Lupinus albus HOM05D004021 ORTHO05D003767 4.9e-15 87.8 1214 23.7
Lalb_Chr11g0064441 Lupinus albus HOM05D004021 ORTHO05D003767 4.9e-15 87.8 1204 22.9
TWI63G0612 Tripterygium wilfordii HOM05D004021 ORTHO05D003767 6.4e-15 87.4 1169 23.0
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 8.4e-15 87.0 1168 22.1
Eucgr.C02901 Eucalyptus grandis HOM05D004021 ORTHO05D003767 1.4e-14 86.3 298 28.9
PGR044G0442 Punica granatum HOM05D004021 ORTHO05D003767 4.2e-14 84.7 1259 23.2
CiPaw.08G024400 Carya illinoinensis HOM05D004021 ORTHO05D003767 1.2e-13 83.2 169 30.2
SalBow1G4226 Salvia bowleyana HOM05D004021 ORTHO05D003767 1.2e-13 83.2 187 33.2
CANSAT25G3821 Cannabis sativa HOM05D004021 ORTHO05D003767 4.6e-13 81.3 1344 21.9
Sed0007846 Sechium edule HOM05D004021 ORTHO05D003767 4.6e-13 81.3 1199 21.9
Migut.E01516 Erythranthe guttata HOM05D004021 ORTHO05D003767 7.8e-13 80.5 85 45.9
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 7.8e-13 80.5 148 35.8
Sopen11g028940 Solanum pennellii HOM05D004021 ORTHO05D003767 7.8e-13 80.5 90 44.4
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.0e-12 80.1 128 38.3
Nitab4.5_0000664g0250 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.3e-12 79.7 140 36.4
Solyc11g071250.3 Solanum lycopersicum HOM05D004021 ORTHO05D003767 2.3e-12 79.0 90 43.3
Migut.A00223 Erythranthe guttata HOM05D004021 ORTHO05D003767 3.9e-12 78.2 91 38.5
Nn2g11674 Nelumbo nucifera HOM05D004021 ORTHO05D003767 5.1e-12 77.8 93 46.2
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 1.5e-11 76.3 1327 22.3
AUR62009309 Chenopodium quinoa HOM05D012164 ORTHO05D003767 1.9e-11 75.9 123 35.8
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 1.9e-11 75.9 1071 21.8
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 2.5e-11 75.5 151 34.4
Cpa.g.sc7.256 Carica papaya HOM05D004021 ORTHO05D003767 3.3e-11 75.1 375 27.5
AUR62041723 Chenopodium quinoa HOM05D012164 ORTHO05D003767 3.3e-11 75.1 129 34.1
ClCG11G015210 Citrullus lanatus HOM05D004021 ORTHO05D003767 3.3e-11 75.1 634 23.2
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 4.3e-11 74.7 1235 23.4
arahy.Tifrunner.gnm1.ann1.E545QA Arachis hypogaea HOM05D004021 ORTHO05D003767 5.6e-11 74.3 1088 21.7
Atru.chr7.2140 Acer truncatum HOM05D004021 ORTHO05D003767 7.3e-11 73.9 793 24.0
TAR626G0813 Trochodendron aralioides HOM05D004021 ORTHO05D003767 7.3e-11 73.9 282 28.0
unitig_578.g16592 Utricularia gibba HOM05D004021 ORTHO05D003767 9.6e-11 73.6 108 38.9
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.6e-10 72.8 1155 23.2
BcaNung04839 Brassica carinata HOM05D004021 ORTHO05D003767 1.6e-10 72.8 100 51.0
Lj4g0004076 Lotus japonicus HOM05D032889 ORTHO05D003767 2.1e-10 72.4 135 29.6
Phvul.009G107600 Phaseolus vulgaris HOM05D004021 ORTHO05D003767 2.1e-10 72.4 1210 22.6
SGA_v2.0_scaffold163G38081 Striga asiatica HOM05D004021 ORTHO05D003767 2.1e-10 72.4 1003 22.7
Hund19530 Selenicereus undatus HOM05D012164 ORTHO05D003767 2.8e-10 72.0 931 22.9
MBI01_g30860_MAGBIO Magnolia biondii HOM05D004021 ORTHO05D003767 8.1e-10 70.5 305 25.9
unitig_26.g9789 Utricularia gibba HOM05D004021 ORTHO05D003767 8.1e-10 70.5 138 32.6
TAR383G0364 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.1e-09 70.1 580 27.9
Lj8A589T33 Lonicera japonica HOM05D004021 ORTHO05D003767 1.4e-09 69.7 89 43.8
CDE05G1167 Ceratophyllum demersum HOM05D004021 ORTHO05D003767 2.4e-09 68.9 81 39.5
MSTRG.1655 Avicennia marina HOM05D004021 ORTHO05D003767 3.1e-09 68.6 1057 22.2
Nitab4.5_0002178g0010 Nicotiana tabacum HOM05D004021 ORTHO05D003767 3.1e-09 68.6 462 25.1
Lalb_Chr01g0011141 Lupinus albus HOM05D004021 ORTHO05D003767 4.0e-09 68.2 1196 23.2
DCAR_003118 Daucus carota HOM05D004021 ORTHO05D003767 6.9e-09 67.4 272 27.9
SEGI_07029 Sequoiadendron giganteum HOM05D004021 ORTHO05D003767 6.9e-09 67.4 161 28.6
Lalb_Chr11g0064431 Lupinus albus HOM05D004021 ORTHO05D003767 9.0e-09 67.0 1163 23.2
Nn3g18104 Nelumbo nucifera HOM05D004021 ORTHO05D003767 9.0e-09 67.0 359 27.0
EL10Ac2g04051 Beta vulgaris HOM05D012164 ORTHO05D003767 1.2e-08 66.6 182 28.0
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 1.2e-08 66.6 210 31.4
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 1.5e-08 66.2 1085 22.5
CAN.G309.87 Capsicum annuum HOM05D004021 ORTHO05D003767 2.0e-08 65.9 1157 22.0
Lalb_Chr22g0352261 Lupinus albus HOM05D004021 ORTHO05D003767 2.0e-08 65.9 288 25.0
CSS0003638 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 3.4e-08 65.1 183 30.1
MD15G1096000 Malus domestica HOM05D004021 ORTHO05D003767 4.5e-08 64.7 200 29.5
CDE05G1483 Ceratophyllum demersum HOM05D050580 ORTHO05D003767 5.8e-08 64.3 997 21.7
Ah.10g035100 Amaranthus hybridus HOM05D012164 ORTHO05D003767 7.6e-08 63.9 1066 23.2
HPP92_026866 Vanilla planifolia HOM05D004021 ORTHO05D003767 7.6e-08 63.9 60 41.7
ECA233G1986 Erigeron canadensis HOM05D004021 ORTHO05D003767 9.9e-08 63.5 78 42.3
Hund03406 Selenicereus undatus HOM05D012164 ORTHO05D003767 1.3e-07 63.2 82 40.2
Peaxi162Scf00657g00058 Petunia axillaris HOM05D004021 ORTHO05D003767 1.7e-07 62.8 144 29.9
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 1.7e-07 62.8 1169 22.2
TAR626G0792 Trochodendron aralioides HOM05D004021 ORTHO05D003767 1.7e-07 62.8 552 26.1
Actinidia14666 Actinidia chinensis HOM05D004021 ORTHO05D003767 2.2e-07 62.4 1279 21.7
ATR0315G010 Amborella trichopoda HOM05D004021 ORTHO05D003767 2.2e-07 62.4 128 32.0
Lsat_1_v5_gn_4_94561 Lactuca sativa HOM05D004021 ORTHO05D003767 2.2e-07 62.4 340 25.9
PGSC0003DMG401018585 Solanum tuberosum HOM05D004021 ORTHO05D003767 4.9e-07 61.2 1167 21.3
SEGI_37840 Sequoiadendron giganteum HOM05D028836 ORTHO05D003767 1.4e-06 59.7 109 33.0
MSTRG.14021 Avicennia marina HOM05D004021 ORTHO05D003767 1.9e-06 59.3 1051 21.8
Nitab4.5_0000500g0270 Nicotiana tabacum HOM05D004021 ORTHO05D003767 1.9e-06 59.3 216 30.1
Lalb_Chr24g0396931 Lupinus albus HOM05D004021 ORTHO05D003767 3.2e-06 58.5 1054 22.5
Atru.chr7.2139 Acer truncatum HOM05D004021 ORTHO05D003767 5.4e-06 57.8 196 33.2
Lalb_Chr22g0352251 Lupinus albus HOM05D004021 ORTHO05D003767 7.1e-06 57.4 415 24.6
SEGI_38675 Sequoiadendron giganteum HOM05D021706 ORTHO05D018121 9.3e-06 57.0 59 44.1


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