Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05451 Brassica carinata HOM05D008154 ORTHO05D012061 1.8e-92 342.4 158 100.0
A02p01230 Brassica napus HOM05D008154 ORTHO05D012061 1.7e-69 266.2 170 73.5
BraA02t05102Z Brassica rapa HOM05D008154 ORTHO05D012061 1.7e-69 266.2 170 73.5
BcaC03g13395 Brassica carinata HOM05D008154 ORTHO05D012061 2.2e-69 265.8 170 72.9
C02p05410 Brassica napus HOM05D008154 ORTHO05D012061 2.2e-69 265.8 170 72.9
BolC2t06489H Brassica oleracea HOM05D008154 ORTHO05D012061 6.3e-69 264.2 170 72.4
BcaNung02650 Brassica carinata HOM05D008154 ORTHO05D012061 1.7e-66 256.1 170 68.8
Thhalv10015823m.g Eutrema salsugineum HOM05D008154 ORTHO05D012061 6.5e-66 254.2 165 73.3
Sp6g31770 Schrenkiella parvula HOM05D008154 ORTHO05D012061 7.2e-65 250.8 168 70.2
AT5G11830 Arabidopsis thaliana HOM05D008154 ORTHO05D012061 1.4e-60 236.5 168 66.7
AL6G22580 Arabidopsis lyrata HOM05D008154 ORTHO05D012061 1.6e-59 233.0 169 66.3
CARHR201330 Cardamine hirsuta HOM05D008154 ORTHO05D012061 2.0e-59 232.6 168 64.3
Carub.0006s1036 Capsella rubella HOM05D008154 ORTHO05D012061 1.7e-58 229.6 166 66.9
THA.LOC104811241 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 4.0e-47 191.8 163 52.1
THA.LOC104811313 Tarenaya hassleriana HOM05D008154 ORTHO05D012557 4.0e-47 191.8 163 52.1
BcaNung03981 Brassica carinata HOM05D008154 ORTHO05D012061 1.4e-44 183.3 168 51.8
A06p36580 Brassica napus HOM05D008154 ORTHO05D012061 2.4e-44 182.6 164 51.8
BraA06t26584Z Brassica rapa HOM05D008154 ORTHO05D012061 2.4e-44 182.6 164 51.8
C07p41900 Brassica napus HOM05D008154 ORTHO05D012061 4.1e-44 181.8 164 51.8
BolC7t44720H Brassica oleracea HOM05D008154 ORTHO05D012061 5.4e-44 181.4 164 51.8
THA.LOC104799699 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 9.1e-44 180.6 176 50.6
Sp2g21650 Schrenkiella parvula HOM05D008154 ORTHO05D012061 1.2e-43 180.3 167 49.7
BcaB04g19752 Brassica carinata HOM05D008154 ORTHO05D012061 2.0e-43 179.5 164 51.2
CARHR187350 Cardamine hirsuta HOM05D008154 ORTHO05D012061 7.7e-43 177.6 160 50.6
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 5.5e-41 171.4 140 54.3
BcaC04g23599 Brassica carinata HOM05D008154 ORTHO05D012061 1.2e-40 170.2 161 49.1
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 1.6e-40 169.9 144 51.4
AL6G38080 Arabidopsis lyrata HOM05D008154 ORTHO05D012557 4.7e-40 168.3 140 52.1
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 6.1e-40 167.9 142 50.7
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 1.7e-37 159.8 156 48.1
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 1.7e-37 159.8 156 48.1
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 3.1e-36 155.6 138 50.7
BolC9t53583H Brassica oleracea HOM05D008154 ORTHO05D012557 3.1e-36 155.6 138 50.7
BcaNung03980 Brassica carinata HOM05D008154 ORTHO05D012061 2.6e-30 136.0 114 55.3
BraA03t09861Z Brassica rapa HOM05D003166 ORTHO05D003605 3.0e-26 122.5 58 91.4
BolC3t13113H Brassica oleracea HOM05D000239 ORTHO05D000484 3.9e-26 122.1 58 89.7
Aa31LG8G3050 Aethionema arabicum HOM05D008154 ORTHO05D012553 7.8e-19 97.8 167 34.7
BolC5t33799H Brassica oleracea HOM05D008154 ORTHO05D012553 2.3e-18 96.3 155 37.4
C05p50530 Brassica napus HOM05D008154 ORTHO05D012553 3.9e-18 95.5 155 37.4
A05p33540 Brassica napus HOM05D008154 ORTHO05D012553 8.6e-18 94.4 155 36.1
BraA05t22175Z Brassica rapa HOM05D008154 ORTHO05D012553 8.6e-18 94.4 155 36.1
BcaC05g28926 Brassica carinata HOM05D008154 ORTHO05D012553 1.1e-17 94.0 154 38.3
BraA05t22176Z Brassica rapa HOM05D008154 ORTHO05D012553 2.5e-17 92.8 155 35.5
BcaB04g20900 Brassica carinata HOM05D008154 ORTHO05D012553 8.1e-16 87.8 155 34.8
BcaC09g48565 Brassica carinata HOM05D008154 ORTHO05D012553 1.1e-15 87.4 155 34.2
BolC1t04810H Brassica oleracea HOM05D008154 ORTHO05D012553 1.1e-15 87.4 155 34.2
CARHR090960 Cardamine hirsuta HOM05D008154 ORTHO05D012553 1.1e-15 87.4 155 33.5
Sp3g14190 Schrenkiella parvula HOM05D008154 ORTHO05D012553 1.1e-15 87.4 155 33.5
Carub.0003s1560 Capsella rubella HOM05D008154 ORTHO05D012553 1.4e-15 87.0 161 33.5
Thhalv10022366m.g Eutrema salsugineum HOM05D008154 ORTHO05D012553 1.4e-15 87.0 155 34.2
A01p38240 Brassica napus HOM05D008154 ORTHO05D012553 2.3e-15 86.3 155 33.5
AT3G15860 Arabidopsis thaliana HOM05D008154 ORTHO05D012553 4.0e-15 85.5 155 33.5
C01p48500 Brassica napus HOM05D008154 ORTHO05D012553 5.2e-15 85.1 161 32.9
BraA01t03880Z Brassica rapa HOM05D008154 ORTHO05D012553 6.8e-15 84.7 155 32.9
THA.LOC104810614 Tarenaya hassleriana HOM05D008154 ORTHO05D012553 1.9e-12 76.6 123 36.6
THA.LOC104811312 Tarenaya hassleriana HOM05D012138 ORTHO05D014405 9.5e-09 64.3 114 32.5
BcaB04g19751 Brassica carinata HOM05D008154 ORTHO05D012557 5.2e-07 58.5 165 30.3
BcaC04g23600 Brassica carinata HOM05D008154 ORTHO05D012557 5.2e-07 58.5 152 31.6
Aa31LG11G5040 Aethionema arabicum HOM05D008154 ORTHO05D012557 8.9e-07 57.8 163 27.0
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 8.9e-07 57.8 126 31.7


User provided reference genes

Program Settings