Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05220 Brassica carinata HOM05D004201 ORTHO05D009648 7.6e-109 397.1 193 100.0
BcaB01g05223 Brassica carinata HOM05D004201 ORTHO05D009648 7.6e-109 397.1 193 100.0
BraA03t10141Z Brassica rapa HOM05D004201 ORTHO05D009648 5.8e-101 370.9 186 95.7
A03p08200 Brassica napus HOM05D004201 ORTHO05D009648 1.3e-89 333.2 187 89.3
BcaB01g04958 Brassica carinata HOM05D004201 ORTHO05D009648 8.7e-89 330.5 187 86.6
BcaB01g04953 Brassica carinata HOM05D004201 ORTHO05D009648 6.9e-86 320.9 185 83.2
BcaB01g04951 Brassica carinata HOM05D004201 ORTHO05D009648 1.0e-84 317.0 190 81.6
BcaB01g05228 Brassica carinata HOM05D004201 ORTHO05D009648 3.3e-80 302.0 187 78.1
BcaB01g05224 Brassica carinata HOM05D004201 ORTHO05D009648 9.0e-78 293.9 192 79.2
A03p08170 Brassica napus HOM05D004201 ORTHO05D009648 1.4e-75 286.6 179 76.0
BraA03t10139Z Brassica rapa HOM05D004201 ORTHO05D009648 9.4e-75 283.9 198 72.2
A03p08190 Brassica napus HOM05D004201 ORTHO05D009648 6.1e-74 281.2 193 73.1
C03p09490 Brassica napus HOM05D004201 ORTHO05D009648 3.0e-73 278.9 180 76.7
BcaB01g05222 Brassica carinata HOM05D004201 ORTHO05D009648 6.7e-73 277.7 189 74.1
BcaB01g05226 Brassica carinata HOM05D004201 ORTHO05D009648 6.7e-73 277.7 189 74.1
BolC3t13435H Brassica oleracea HOM05D004201 ORTHO05D009648 6.7e-73 277.7 199 71.9
BcaB01g05219 Brassica carinata HOM05D004201 ORTHO05D009648 2.5e-72 275.8 180 75.6
A03p08180 Brassica napus HOM05D004201 ORTHO05D009648 3.1e-70 268.9 180 73.9
BcaB01g05225 Brassica carinata HOM05D004201 ORTHO05D009648 9.1e-70 267.3 190 72.6
BolC3t13445H Brassica oleracea HOM05D004201 ORTHO05D009648 2.9e-68 262.3 173 75.1
C03p09410 Brassica napus HOM05D004201 ORTHO05D009648 3.8e-68 261.9 165 77.6
BcaB01g05230 Brassica carinata HOM05D004201 ORTHO05D009648 1.1e-67 260.4 165 77.6
A03p08140 Brassica napus HOM05D004201 ORTHO05D009648 1.4e-67 260.0 165 77.6
BcaB01g05229 Brassica carinata HOM05D004201 ORTHO05D009648 3.9e-65 251.9 192 67.7
BcaB01g05218 Brassica carinata HOM05D004201 ORTHO05D009648 1.5e-64 250.0 193 68.4
BcaB01g04954 Brassica carinata HOM05D004201 ORTHO05D009648 1.7e-63 246.5 192 66.1
BcaB01g04956 Brassica carinata HOM05D004201 ORTHO05D009648 1.5e-61 240.0 188 65.4
C03p09500 Brassica napus HOM05D004201 ORTHO05D009648 1.5e-61 240.0 151 76.8
C03p09480 Brassica napus HOM05D004201 ORTHO05D009648 3.8e-60 235.3 124 90.3
A03p08160 Brassica napus HOM05D004201 ORTHO05D009648 4.7e-58 228.4 185 65.9
BcaB01g04955 Brassica carinata HOM05D004201 ORTHO05D009648 6.1e-58 228.0 163 70.6
BcaB01g05221 Brassica carinata HOM05D004201 ORTHO05D009648 1.8e-57 226.5 152 75.7
C03p09420 Brassica napus HOM05D004201 ORTHO05D009648 1.8e-57 226.5 185 64.9
BolC3t13436H Brassica oleracea HOM05D004201 ORTHO05D009648 1.6e-45 186.8 128 71.1
BcaB01g05217 Brassica carinata HOM05D004201 ORTHO05D009648 8.0e-42 174.5 193 53.4
Carub.0006s1528 Capsella rubella HOM05D004201 ORTHO05D009648 5.2e-41 171.8 191 49.7
Carub.0006s1532 Capsella rubella HOM05D004201 ORTHO05D009648 2.0e-40 169.9 188 51.6
AT5G17150 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 5.4e-38 161.8 162 49.4
AT5G17120 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 7.0e-38 161.4 162 49.4
AT5G17090 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 1.3e-36 157.1 158 53.8
CARHR196090 Cardamine hirsuta HOM05D004201 ORTHO05D009648 1.7e-36 156.8 152 52.6
BcaB03g13238 Brassica carinata HOM05D004201 ORTHO05D009648 2.9e-36 156.0 171 46.8
BcaB01g04950 Brassica carinata HOM05D004201 ORTHO05D009648 1.5e-35 153.7 129 63.6
Aa31LG11G12620 Aethionema arabicum HOM05D004201 ORTHO05D009648 1.6e-34 150.2 186 44.6
BcaC06g31919 Brassica carinata HOM05D004201 ORTHO05D009648 6.1e-34 148.3 152 49.3
BcaC07g38685 Brassica carinata HOM05D004201 ORTHO05D009648 1.8e-33 146.7 171 45.6
BolC8t49120H Brassica oleracea HOM05D004201 ORTHO05D009648 1.8e-33 146.7 171 45.6
Carub.0006s1527 Capsella rubella HOM05D004201 ORTHO05D009648 2.3e-33 146.4 191 43.5
A08p33280 Brassica napus HOM05D004201 ORTHO05D009648 4.0e-33 145.6 171 45.0
C08p14870 Brassica napus HOM05D004201 ORTHO05D009648 1.2e-32 144.1 171 45.0
C09p60060 Brassica napus HOM05D004201 ORTHO05D009648 1.5e-32 143.7 187 44.4
BolC9t58841H Brassica oleracea HOM05D004201 ORTHO05D009648 1.5e-32 143.7 187 44.4
BraA08t35247Z Brassica rapa HOM05D004201 ORTHO05D009648 4.4e-32 142.1 171 45.0
Carub.0006s1529 Capsella rubella HOM05D004201 ORTHO05D009648 5.7e-32 141.7 188 44.1
Sp6g27080 Schrenkiella parvula HOM05D004201 ORTHO05D009648 2.2e-31 139.8 188 44.7
AT5G17110 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 3.7e-31 139.0 159 44.0
Aa31LG11G12560 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.4e-30 136.3 174 41.4
Aa31LG11G12790 Aethionema arabicum HOM05D004201 ORTHO05D009648 3.2e-30 136.0 187 42.2
Aa31LG11G12490 Aethionema arabicum HOM05D004201 ORTHO05D009648 4.1e-30 135.6 188 42.6
Aa31LG11G12540 Aethionema arabicum HOM05D004201 ORTHO05D009648 7.8e-29 131.3 176 39.8
Carub.0006s1531 Capsella rubella HOM05D004201 ORTHO05D009648 1.3e-28 130.6 165 42.4
Aa31LG11G12550 Aethionema arabicum HOM05D004201 ORTHO05D009648 8.6e-28 127.9 154 44.8
Aa31LG11G12510 Aethionema arabicum HOM05D004201 ORTHO05D009648 4.3e-27 125.6 151 42.4
AL6G28150 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 5.6e-27 125.2 187 39.0
Carub.0006s1530 Capsella rubella HOM05D004201 ORTHO05D009648 5.6e-27 125.2 165 41.2
AL6G28160 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 2.8e-26 122.9 152 44.7
AT5G17100 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 2.8e-26 122.9 160 40.0
AL6G28110 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 1.0e-25 120.9 195 36.4
Aa31LG11G12500 Aethionema arabicum HOM05D004201 ORTHO05D009648 3.1e-25 119.4 189 36.5
Aa31LG11G12840 Aethionema arabicum HOM05D004201 ORTHO05D009648 8.9e-25 117.9 170 37.6
Thhalv10015849m.g Eutrema salsugineum HOM05D004201 ORTHO05D009648 8.9e-25 117.9 206 38.3
Aa31LG11G12830 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.0e-24 116.7 149 42.3
Aa31LG11G12800 Aethionema arabicum HOM05D004201 ORTHO05D009648 9.8e-24 114.4 156 38.5
Aa31LG11G12820 Aethionema arabicum HOM05D004201 ORTHO05D009648 8.3e-23 111.3 169 37.9
C03p09430 Brassica napus HOM05D004201 ORTHO05D009648 4.1e-22 109.0 79 64.6
Aa31LG11G12530 Aethionema arabicum HOM05D004201 ORTHO05D009648 7.0e-22 108.2 187 37.4
BraA10t44284Z Brassica rapa HOM05D004201 ORTHO05D009648 1.1e-19 100.9 159 39.6
A10p22250 Brassica napus HOM05D004201 ORTHO05D009648 1.5e-19 100.5 159 39.6
BcaB08g36118 Brassica carinata HOM05D004201 ORTHO05D009648 1.9e-19 100.1 189 38.6
AL3G16040 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 5.6e-19 98.6 205 38.5
Carub.0006s3347 Capsella rubella HOM05D004201 ORTHO05D009648 7.3e-19 98.2 208 39.4
AL3G16360 Arabidopsis lyrata HOM05D004201 ORTHO05D031360 9.5e-19 97.8 161 39.8
A03p20510 Brassica napus HOM05D004201 ORTHO05D009648 9.5e-19 97.8 164 39.6
BcaC01g06645 Brassica carinata HOM05D004201 ORTHO05D009648 1.6e-18 97.1 161 39.1
Carub.0006s3346 Capsella rubella HOM05D004201 ORTHO05D009648 1.6e-18 97.1 206 35.0
AL3G16010 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 2.1e-18 96.7 160 41.9
AL3G16370 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 1.1e-17 94.4 201 34.8
AL6G49230 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 1.4e-17 94.0 146 41.1
Carub.0006s3348 Capsella rubella HOM05D004201 ORTHO05D009648 1.8e-17 93.6 199 38.2
AL6G49220 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 5.2e-17 92.0 166 37.3
Carub.0006s3349 Capsella rubella HOM05D004201 ORTHO05D009648 2.0e-16 90.1 166 39.2
Thhalv10021511m.g Eutrema salsugineum HOM05D004201 ORTHO05D011677 2.6e-16 89.7 164 37.8
C09p02940 Brassica napus HOM05D004201 ORTHO05D009648 9.8e-16 87.8 171 36.8
AL6G37010 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 1.3e-15 87.4 157 38.2
AL8G28550 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 1.3e-15 87.4 157 38.2
A05p30050 Brassica napus HOM05D004201 ORTHO05D042104 1.7e-15 87.0 103 47.6
BraA05t19763Z Brassica rapa HOM05D004201 ORTHO05D042104 1.7e-15 87.0 103 47.6
CARHR080560 Cardamine hirsuta HOM05D004201 ORTHO05D011677 2.9e-15 86.3 182 39.0
C05p02080 Brassica napus HOM05D004201 ORTHO05D012052 1.4e-14 84.0 176 34.7
BolC5t28985H Brassica oleracea HOM05D004201 ORTHO05D012052 1.4e-14 84.0 176 34.7
AL3G17200 Arabidopsis lyrata HOM05D004201 ORTHO05D014863 1.9e-14 83.6 161 39.8
A10p02260 Brassica napus HOM05D004201 ORTHO05D012052 4.1e-14 82.4 158 36.1
BraA10t42492Z Brassica rapa HOM05D004201 ORTHO05D012052 4.1e-14 82.4 158 36.1
BraA01t04445Z Brassica rapa HOM05D014826 ORTHO05D014863 5.4e-14 82.0 149 38.3
AT1G03710 Arabidopsis thaliana HOM05D004201 ORTHO05D012052 7.1e-14 81.6 183 32.8
BNapus_Darmor_BZH_scaffold_118p00220 Brassica napus HOM05D014826 ORTHO05D014863 7.1e-14 81.6 149 38.3
AL304U10030 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 9.2e-14 81.3 162 37.0
BcaB02g06909 Brassica carinata HOM05D004201 ORTHO05D012052 2.1e-13 80.1 159 35.8
AL3G17220 Arabidopsis lyrata HOM05D004201 ORTHO05D014863 3.5e-13 79.3 162 36.4
BcaB08g36116 Brassica carinata HOM05D004201 ORTHO05D009648 3.5e-13 79.3 164 38.4
C05p61800 Brassica napus HOM05D004201 ORTHO05D011677 4.6e-13 79.0 164 35.4
BcaC05g30121 Brassica carinata HOM05D004201 ORTHO05D011677 6.0e-13 78.6 164 35.4
BraA09t35929Z Brassica rapa HOM05D004201 ORTHO05D009648 6.0e-13 78.6 159 37.1
BraA10t42489Z Brassica rapa HOM05D004201 ORTHO05D012052 6.0e-13 78.6 158 36.1
THA.LOC104809406 Tarenaya hassleriana HOM05D004201 ORTHO05D012052 6.0e-13 78.6 198 34.3
A10p02210 Brassica napus HOM05D004201 ORTHO05D012052 1.3e-12 77.4 158 35.4
BcaC05g29805 Brassica carinata HOM05D014826 ORTHO05D014863 1.7e-12 77.0 135 37.8
C05p60930 Brassica napus HOM05D014826 ORTHO05D014863 1.7e-12 77.0 135 37.8
BolC5t34749H Brassica oleracea HOM05D014826 ORTHO05D014863 1.7e-12 77.0 135 37.8
AL1G13240 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 2.3e-12 76.6 157 35.7
A05p41720 Brassica napus HOM05D014826 ORTHO05D014863 2.3e-12 76.6 135 37.8
CARHR079820 Cardamine hirsuta HOM05D004201 ORTHO05D011677 2.3e-12 76.6 85 50.6
CARHR080810 Cardamine hirsuta HOM05D004201 ORTHO05D014863 2.3e-12 76.6 198 31.3
BraA09t35931Z Brassica rapa HOM05D004201 ORTHO05D009648 3.0e-12 76.3 74 55.4
THA.LOC104809407 Tarenaya hassleriana HOM05D004201 ORTHO05D012052 3.9e-12 75.9 199 34.7
BcaC05g24515 Brassica carinata HOM05D004201 ORTHO05D012052 5.1e-12 75.5 155 33.5
Aa31LG1G23650 Aethionema arabicum HOM05D004201 ORTHO05D011677 8.6e-12 74.7 157 33.1
BraA05t22891Z Brassica rapa HOM05D014826 ORTHO05D014863 8.6e-12 74.7 135 37.8
AL1G13250 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 1.1e-11 74.3 164 32.9
Carub.0003s0573 Capsella rubella HOM05D004201 ORTHO05D014863 1.1e-11 74.3 192 32.8
Aa31LG1G23790 Aethionema arabicum HOM05D004201 ORTHO05D011677 1.5e-11 73.9 155 30.3
AT4G03570 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 1.5e-11 73.9 124 35.5
BcaC05g30167 Brassica carinata HOM05D004201 ORTHO05D011677 1.5e-11 73.9 163 33.7
THA.LOC104801128 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 4.3e-11 72.4 164 33.5
AL3G16060 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 5.6e-11 72.0 137 31.4
Thhalv10008370m.g Eutrema salsugineum HOM05D004201 ORTHO05D012052 5.6e-11 72.0 191 31.9
AL1G13230 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 7.3e-11 71.6 156 32.7
BcaC05g30039 Brassica carinata HOM05D014826 ORTHO05D014863 7.3e-11 71.6 135 37.0
Carub.0001s0281 Capsella rubella HOM05D004201 ORTHO05D012052 7.3e-11 71.6 160 33.8
THA.LOC104801127 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 7.3e-11 71.6 165 33.3
CARHR079790 Cardamine hirsuta HOM05D004201 ORTHO05D011677 9.5e-11 71.2 81 49.4
THA.LOC104801126 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 2.8e-10 69.7 165 33.3
BolC5t34836H Brassica oleracea HOM05D004201 ORTHO05D011677 3.6e-10 69.3 193 33.2
THA.LOC104801147 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 3.6e-10 69.3 197 30.5
THA.LOC104801148 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 3.6e-10 69.3 197 30.5
AL1G13220 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 6.2e-10 68.6 195 30.3
AL6G28190 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 6.2e-10 68.6 83 43.4
AL1G13200 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 1.1e-09 67.8 193 31.1
Aa31LG1G23660 Aethionema arabicum HOM05D004201 ORTHO05D011677 1.2e-08 64.3 189 28.6
BraA05t19067Z Brassica rapa HOM05D004201 ORTHO05D011677 1.2e-08 64.3 165 32.7
BcaB01g02543 Brassica carinata HOM05D012310 ORTHO05D012594 1.5e-08 63.9 173 32.9
AT3G05450 Arabidopsis thaliana HOM05D004201 ORTHO05D011677 5.8e-08 62.0 137 36.5
Aa31LG1G23530 Aethionema arabicum HOM05D004201 ORTHO05D011677 9.9e-08 61.2 162 31.5
AL1G56010 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 2.2e-07 60.1 160 36.9
CARHR079840 Cardamine hirsuta HOM05D004201 ORTHO05D011677 4.9e-07 58.9 189 30.2
CARHR080820 Cardamine hirsuta HOM05D014826 ORTHO05D014863 4.9e-07 58.9 55 56.4
Aa31LG1G23540 Aethionema arabicum HOM05D004201 ORTHO05D011677 6.4e-07 58.5 166 31.3
AT4G03590 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 1.9e-06 57.0 186 29.6


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