Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05209 Brassica carinata HOM05D007511 ORTHO05D003753 2.5e-62 241.9 119 100.0
C03p09830 Brassica napus HOM05D007511 ORTHO05D003753 2.5e-62 241.9 119 100.0
A03p08430 Brassica napus HOM05D007511 ORTHO05D003753 4.7e-61 237.7 119 97.5
BraA03t10166Z Brassica rapa HOM05D007511 ORTHO05D003753 4.7e-61 237.7 119 97.5
BolC3t13471H Brassica oleracea HOM05D007511 ORTHO05D003753 5.2e-60 234.2 119 96.6
BraA02t05399Z Brassica rapa HOM05D007511 ORTHO05D003753 6.4e-42 174.1 111 79.3
A02p04350 Brassica napus HOM05D007511 ORTHO05D003753 2.4e-41 172.2 111 78.4
C02p09200 Brassica napus HOM05D007511 ORTHO05D003753 7.1e-41 170.6 111 77.5
Thhalv10015688m.g Eutrema salsugineum HOM05D007511 ORTHO05D003753 1.2e-40 169.9 112 80.4
BcaC04g18776 Brassica carinata HOM05D007511 ORTHO05D003753 6.7e-39 164.1 114 73.7
C09p59570 Brassica napus HOM05D007511 ORTHO05D003753 6.7e-39 164.1 114 73.7
BolC9t58796H Brassica oleracea HOM05D007511 ORTHO05D003753 6.7e-39 164.1 114 73.7
A10p21820 Brassica napus HOM05D007511 ORTHO05D003753 4.3e-38 161.4 114 72.8
BraA10t44242Z Brassica rapa HOM05D007511 ORTHO05D003753 4.3e-38 161.4 114 72.8
BcaC03g13529 Brassica carinata HOM05D007511 ORTHO05D003753 7.4e-38 160.6 111 74.8
BolC2t06828H Brassica oleracea HOM05D007511 ORTHO05D003753 7.4e-38 160.6 111 74.8
Sp6g26630 Schrenkiella parvula HOM05D007511 ORTHO05D003753 1.6e-37 159.5 112 76.8
CARHR195590 Cardamine hirsuta HOM05D007511 ORTHO05D003753 3.1e-36 155.2 108 76.9
BcaB08g36759 Brassica carinata HOM05D007511 ORTHO05D003753 6.9e-36 154.1 114 71.1
AL6G28680 Arabidopsis lyrata HOM05D007511 ORTHO05D003753 1.2e-35 153.3 121 71.1
Carub.0006s1583 Capsella rubella HOM05D007511 ORTHO05D003753 3.4e-35 151.8 119 71.4
AT5G17590 Arabidopsis thaliana HOM05D007511 ORTHO05D003753 7.1e-33 144.1 119 65.5
Aa31LG11G12060 Aethionema arabicum HOM05D007511 ORTHO05D003753 3.1e-28 128.6 110 62.7
THA.LOC104802898 Tarenaya hassleriana HOM05D007511 ORTHO05D003753 1.0e-23 113.6 91 60.4
Cpa.g.sc73.86 Carica papaya HOM05D007511 ORTHO05D003753 9.7e-14 80.5 127 38.6
Duzib177G0499 Durio zibethinus HOM05D007511 ORTHO05D003753 4.5e-11 71.6 75 45.3
Lj3g0008746 Lotus japonicus HOM05D007511 ORTHO05D003753 7.7e-11 70.9 63 50.8
PSO782G3115 Papaver somniferum HOM05D007511 ORTHO05D003753 1.0e-10 70.5 68 44.1
Atru.chr2.1724 Acer truncatum HOM05D007511 ORTHO05D003753 2.2e-10 69.3 67 46.3
Manes.08G158000 Manihot esculenta HOM05D007511 ORTHO05D003753 1.1e-09 67.0 98 37.8
Duzib128G1432 Durio zibethinus HOM05D007511 ORTHO05D003753 1.4e-09 66.6 75 37.3
PSO063G5504 Papaver somniferum HOM05D007511 ORTHO05D003753 1.9e-09 66.2 68 41.2
Phvul.010G032800 Phaseolus vulgaris HOM05D007511 ORTHO05D003753 7.2e-09 64.3 65 46.2
PGSC0003DMG400043768 Solanum tuberosum HOM05D007511 ORTHO05D003753 7.2e-09 64.3 69 46.4
CiPaw.02G046500 Carya illinoinensis HOM05D007511 ORTHO05D003753 9.4e-09 63.9 106 33.0
Sopen01g032800 Solanum pennellii HOM05D007511 ORTHO05D003753 9.4e-09 63.9 69 46.4
Glyma.16G082300 Glycine max HOM05D007511 ORTHO05D003753 1.6e-08 63.2 67 43.3
MD02G1239600 Malus domestica HOM05D007511 ORTHO05D003753 1.6e-08 63.2 73 41.1
Potri.019G043701 Populus trichocarpa HOM05D007511 ORTHO05D003753 1.6e-08 63.2 116 34.5
TPR.G24583 Trifolium pratense HOM05D007511 ORTHO05D003753 2.1e-08 62.8 64 40.6
Nn1g09148 Nelumbo nucifera HOM05D007511 ORTHO05D003753 3.6e-08 62.0 67 35.8
Cfa000931 Carpinus fangiana HOM05D007511 ORTHO05D003753 4.7e-08 61.6 105 37.1
Sabra19G0054300 Salix brachista HOM05D007511 ORTHO05D003753 6.1e-08 61.2 118 36.4
Ciclev10033674m.g Citrus clementina HOM05D007511 ORTHO05D003753 7.9e-08 60.8 121 37.2
Medtr8g011160 Medicago truncatula HOM05D007511 ORTHO05D003753 7.9e-08 60.8 64 40.6
Sed0019168 Sechium edule HOM05D007511 ORTHO05D003753 7.9e-08 60.8 118 30.5
TWI34G0987 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 1.0e-07 60.5 63 44.4
TAR629G3237 Trochodendron aralioides HOM05D007511 ORTHO05D003753 1.4e-07 60.1 68 39.7
MBI06_g35216_MAGBIO Magnolia biondii HOM05D007511 ORTHO05D003753 1.8e-07 59.7 68 41.2
Prupe.2G098000 Prunus persica HOM05D007511 ORTHO05D003753 2.3e-07 59.3 65 41.5
Hma1.2p1_0353F.1_g133330 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 3.0e-07 58.9 66 43.9
Lalb_Chr07g0194541 Lupinus albus HOM05D007511 ORTHO05D003753 3.0e-07 58.9 64 40.6
Nitab4.5_0004800g0110 Nicotiana tabacum HOM05D000001 ORTHO05D011953 3.0e-07 58.9 69 42.0
CANSAT35G2046 Cannabis sativa HOM05D007511 ORTHO05D003753 3.9e-07 58.5 63 39.7
RcHm_v2.0_Chr1g0337051 Rosa chinensis HOM05D007511 ORTHO05D003753 3.9e-07 58.5 67 44.8
Nn3g19224 Nelumbo nucifera HOM05D007511 ORTHO05D003753 6.7e-07 57.8 63 41.3
TWI60G1247 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 6.7e-07 57.8 106 34.0
Glyma.03G092200 Glycine max HOM05D007511 ORTHO05D003753 1.1e-06 57.0 111 35.1
Gohir.D11G235550 Gossypium hirsutum HOM05D007511 ORTHO05D003753 1.1e-06 57.0 67 37.3
CsaV3_2G011030 Cucumis sativus L. HOM05D007511 ORTHO05D003753 2.0e-06 56.2 72 41.7
Psat0s409g0080 Pisum sativum HOM05D007511 ORTHO05D003753 2.0e-06 56.2 64 35.9
MD07G1077000 Malus domestica HOM05D007511 ORTHO05D003753 2.6e-06 55.8 65 36.9
Oeu024951.1 Olea europaea HOM05D007511 ORTHO05D003753 2.6e-06 55.8 71 35.2
Oeu032775.1 Olea europaea HOM05D007511 ORTHO05D003753 2.6e-06 55.8 71 36.6
Aqoxy5G00551 Aquilegia oxysepala HOM05D007511 ORTHO05D003753 3.3e-06 55.5 61 45.9
Hma1.2p1_0915F.1_g236420 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 4.4e-06 55.1 71 36.6
CDE08G1405 Ceratophyllum demersum HOM05D007511 ORTHO05D003753 5.7e-06 54.7 120 31.7
Peaxi162Scf01343g00114 Petunia axillaris HOM05D007511 ORTHO05D003753 5.7e-06 54.7 105 30.5
Gorai.007G248300 Gossypium raimondii HOM05D007511 ORTHO05D003753 9.7e-06 53.9 65 36.9


User provided reference genes

Program Settings