Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05201 Brassica carinata HOM05D009160 ORTHO05D009596 3.2e-65 251.5 121 100.0
BolC3t13462H Brassica oleracea HOM05D009160 ORTHO05D009596 3.2e-65 251.5 121 100.0
C03p09720 Brassica napus HOM05D009160 ORTHO05D009596 1.6e-64 249.2 121 99.2
A03p08340 Brassica napus HOM05D009160 ORTHO05D009596 1.1e-62 243.0 121 95.9
BolC3t13454H Brassica oleracea HOM05D009160 ORTHO05D009596 2.9e-58 228.4 121 90.1
C03p09690 Brassica napus HOM05D009160 ORTHO05D009596 3.2e-57 224.9 121 87.6
BolC3t13456H Brassica oleracea HOM05D009160 ORTHO05D009596 2.1e-56 222.2 121 84.3
C03p09660 Brassica napus HOM05D009160 ORTHO05D009596 4.7e-56 221.1 121 85.1
BcaB01g05195 Brassica carinata HOM05D009160 ORTHO05D009596 6.1e-56 220.7 121 84.3
BraA03t10152Z Brassica rapa HOM05D009160 ORTHO05D009596 8.0e-56 220.3 121 85.1
C03p09680 Brassica napus HOM05D009160 ORTHO05D009596 4.0e-55 218.0 121 83.5
BolC3t13458H Brassica oleracea HOM05D009160 ORTHO05D009596 6.7e-55 217.2 121 86.0
BraA03t10149Z Brassica rapa HOM05D009160 ORTHO05D009596 1.2e-54 216.5 125 83.2
BcaB01g05193 Brassica carinata HOM05D009160 ORTHO05D009596 2.0e-54 215.7 120 83.3
C03p09670 Brassica napus HOM05D009160 ORTHO05D009596 2.0e-54 215.7 120 83.3
BolC3t13455H Brassica oleracea HOM05D009160 ORTHO05D009596 2.0e-54 215.7 120 83.3
A03p08300 Brassica napus HOM05D009160 ORTHO05D009596 2.6e-54 215.3 120 83.3
BcaB01g04931 Brassica carinata HOM05D009160 ORTHO05D009596 4.4e-54 214.5 121 81.8
BraA03t10150Z Brassica rapa HOM05D009160 ORTHO05D009596 7.5e-54 213.8 121 81.8
BcaB01g04930 Brassica carinata HOM05D009160 ORTHO05D009596 9.7e-54 213.4 121 81.0
BcaB01g04928 Brassica carinata HOM05D009160 ORTHO05D009596 2.8e-53 211.8 121 81.0
BcaB01g04929 Brassica carinata HOM05D009160 ORTHO05D009596 2.8e-53 211.8 121 80.2
BcaB01g04927 Brassica carinata HOM05D009160 ORTHO05D009596 3.7e-53 211.5 121 80.2
A03p08310 Brassica napus HOM05D009160 ORTHO05D009596 1.4e-52 209.5 121 79.3
BcaB01g05200 Brassica carinata HOM05D009160 ORTHO05D009596 4.1e-52 208.0 120 80.8
BolC3t13461H Brassica oleracea HOM05D009160 ORTHO05D009596 4.1e-52 208.0 120 80.8
C03p09710 Brassica napus HOM05D009160 ORTHO05D009596 9.1e-52 206.8 120 80.8
BcaB01g04933 Brassica carinata HOM05D009160 ORTHO05D009596 1.6e-51 206.1 119 81.5
A03p08320 Brassica napus HOM05D009160 ORTHO05D009596 9.4e-49 196.8 106 84.9
Thhalv10015886m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 5.7e-30 134.4 127 57.5
SpUn0004_0070 Schrenkiella parvula HOM05D009160 ORTHO05D009596 1.6e-27 126.3 125 52.8
SpUn0066_0020 Schrenkiella parvula HOM05D009160 ORTHO05D009596 1.6e-27 126.3 125 52.8
Sp6g26890 Schrenkiella parvula HOM05D009160 ORTHO05D009596 4.3e-25 118.2 126 53.2
BcaB01g04926 Brassica carinata HOM05D009160 ORTHO05D009596 7.5e-22 107.5 79 69.6
Thhalv10015780m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 6.0e-19 97.8 129 45.0
Thhalv10014860m.g Eutrema salsugineum HOM05D009029 ORTHO05D009596 8.3e-13 77.4 168 32.7
BcaB08g36782 Brassica carinata HOM05D009029 ORTHO05D009596 3.2e-12 75.5 137 35.0
Carub.0006s1554 Capsella rubella HOM05D009029 ORTHO05D009596 4.1e-12 75.1 145 35.9
C09p59860 Brassica napus HOM05D009029 ORTHO05D009596 2.7e-11 72.4 151 34.4
BolC1t01146H Brassica oleracea HOM05D009029 ORTHO05D009596 2.7e-11 72.4 151 34.4
BcaC09g51570 Brassica carinata HOM05D009029 ORTHO05D009596 3.5e-11 72.0 141 35.5
A10p22070 Brassica napus HOM05D009029 ORTHO05D009596 3.5e-11 72.0 151 34.4
CARHR195870 Cardamine hirsuta HOM05D009029 ORTHO05D009596 4.6e-11 71.6 160 29.4
C09p59840 Brassica napus HOM05D009029 ORTHO05D009596 7.8e-11 70.9 150 34.0
AT5G17340 Arabidopsis thaliana HOM05D009029 ORTHO05D009596 1.3e-10 70.1 161 34.2
BcaB08g36781 Brassica carinata HOM05D009029 ORTHO05D009596 3.0e-10 68.9 165 32.7
Carub.0006s1555 Capsella rubella HOM05D009029 ORTHO05D009596 3.9e-10 68.6 158 31.0
Sp6g26880 Schrenkiella parvula HOM05D009029 ORTHO05D009596 3.9e-10 68.6 158 32.3
AL6G28410 Arabidopsis lyrata HOM05D009029 ORTHO05D009596 5.1e-10 68.2 161 32.9
BraA02t05377Z Brassica rapa HOM05D009029 ORTHO05D009596 6.6e-10 67.8 166 31.9
BraA10t44266Z Brassica rapa HOM05D009029 ORTHO05D009596 1.1e-09 67.0 138 34.8
CARHR195880 Cardamine hirsuta HOM05D009029 ORTHO05D009596 1.1e-09 67.0 83 42.2
BcaC03g18552 Brassica carinata HOM05D009029 ORTHO05D009596 1.5e-09 66.6 166 31.3
A02p04140 Brassica napus HOM05D009029 ORTHO05D009596 1.5e-09 66.6 166 31.3
C02p08990 Brassica napus HOM05D009029 ORTHO05D009596 1.5e-09 66.6 166 31.3
BolC2t06808H Brassica oleracea HOM05D009029 ORTHO05D009596 1.5e-09 66.6 166 31.3
BolC9t58822H Brassica oleracea HOM05D009029 ORTHO05D009596 1.9e-09 66.2 138 34.8
BcaB05g23261 Brassica carinata HOM05D009029 ORTHO05D009596 1.2e-08 63.5 165 30.3
THA.LOC104820858 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 5.2e-07 58.2 87 31.0
BcaC04g18803 Brassica carinata HOM05D009029 ORTHO05D009596 3.4e-06 55.5 150 32.0


User provided reference genes

Program Settings