Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05090 Brassica carinata HOM05D000938 ORTHO05D003373 6.7e-63 243.8 121 100.0
BolC3t13285H Brassica oleracea HOM05D000938 ORTHO05D003373 2.0e-59 232.3 114 100.0
BcaB01g05092 Brassica carinata HOM05D000938 ORTHO05D003373 1.1e-33 146.7 115 67.8
C03p07850 Brassica napus HOM05D000938 ORTHO05D003373 1.1e-33 146.7 115 67.8
BolC3t13284H Brassica oleracea HOM05D000938 ORTHO05D003373 1.5e-33 146.4 115 67.8
A03p06860 Brassica napus HOM05D000938 ORTHO05D003373 5.6e-33 144.4 114 66.7
A03p06850 Brassica napus HOM05D000938 ORTHO05D003373 2.8e-32 142.1 116 68.1
Thhalv10013249m.g Eutrema salsugineum HOM05D000938 ORTHO05D003373 1.3e-29 133.3 116 60.3
Sp6g29130 Schrenkiella parvula HOM05D000938 ORTHO05D003373 9.2e-28 127.1 116 61.2
A10p23830 Brassica napus HOM05D000938 ORTHO05D003373 3.9e-26 121.7 116 59.5
BcaB08g36937 Brassica carinata HOM05D000938 ORTHO05D003373 1.1e-25 120.2 117 58.1
BcaC04g18999 Brassica carinata HOM05D000938 ORTHO05D003373 1.9e-25 119.4 117 59.8
BraA10t44448Z Brassica rapa HOM05D000938 ORTHO05D003373 3.3e-25 118.6 116 58.6
C09p62240 Brassica napus HOM05D000938 ORTHO05D003373 7.3e-25 117.5 113 60.2
AL6G25710 Arabidopsis lyrata HOM05D000938 ORTHO05D003373 8.9e-23 110.5 115 54.8
A03p06870 Brassica napus HOM05D000938 ORTHO05D003373 4.4e-22 108.2 114 55.3
Carub.0006s1308 Capsella rubella HOM05D000938 ORTHO05D003373 9.8e-22 107.1 118 52.5
Sp6g29120 Schrenkiella parvula HOM05D000938 ORTHO05D003373 2.2e-21 105.9 119 51.3
BcaB01g05089 Brassica carinata HOM05D000938 ORTHO05D003373 4.9e-21 104.8 115 54.8
C03p07870 Brassica napus HOM05D000938 ORTHO05D003373 5.4e-20 101.3 116 56.0
Thhalv10024953m.g Eutrema salsugineum HOM05D000938 ORTHO05D003373 7.0e-20 100.9 118 49.2
BolC9t59060H Brassica oleracea HOM05D000938 ORTHO05D003373 1.2e-19 100.1 121 49.6
BraA03t10010Z Brassica rapa HOM05D000938 ORTHO05D003373 6.0e-19 97.8 114 50.9
BraA10t44446Z Brassica rapa HOM05D000938 ORTHO05D003373 5.0e-18 94.7 116 47.4
BcaB08g36935 Brassica carinata HOM05D000938 ORTHO05D003373 3.6e-16 88.6 117 47.0
AT5G14930 Arabidopsis thaliana HOM05D000938 ORTHO05D003373 6.2e-16 87.8 126 42.9
CARHR198400 Cardamine hirsuta HOM05D000938 ORTHO05D003373 2.0e-14 82.8 109 47.7
Thhalv10013264m.g Eutrema salsugineum HOM05D000938 ORTHO05D003373 1.3e-13 80.1 106 44.3
THA.LOC104821072 Tarenaya hassleriana HOM05D000938 ORTHO05D003373 2.2e-13 79.3 116 45.7
Aa31LG11G14570 Aethionema arabicum HOM05D000938 ORTHO05D003373 1.0e-10 70.5 119 38.7
A10p23810 Brassica napus HOM05D000938 ORTHO05D003373 3.6e-08 62.0 95 41.1
Actinidia36063 Actinidia chinensis HOM05D005389 ORTHO05D008484 1.8e-07 59.7 121 35.5
Eucgr.I01864 Eucalyptus grandis HOM05D000938 ORTHO05D003373 6.8e-07 57.8 117 29.9
Eucgr.I01838 Eucalyptus grandis HOM05D000938 ORTHO05D003373 1.5e-06 56.6 117 29.1
QL93p0205_0194 Quercus lobata HOM05D000938 ORTHO05D003373 9.9e-06 53.9 125 31.2


User provided reference genes

Program Settings