Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05071 Brassica carinata HOM05D009607 ORTHO05D009849 1.5e-53 212.6 111 100.0
BolC3t13298H Brassica oleracea HOM05D009607 ORTHO05D009849 2.3e-41 172.2 116 82.8
C03p08000 Brassica napus HOM05D006350 ORTHO05D007850 1.8e-38 162.5 107 84.1
BraA03t10024Z Brassica rapa HOM05D009607 ORTHO05D009849 3.1e-38 161.8 107 83.2
A03p07020 Brassica napus HOM05D006350 ORTHO05D007850 5.8e-37 157.5 114 76.3
CARHR198120 Cardamine hirsuta HOM05D009607 ORTHO05D009849 7.6e-37 157.1 110 74.5
Sp6g28880 Schrenkiella parvula HOM05D009607 ORTHO05D009849 7.6e-37 157.1 114 74.6
BcaNung03324 Brassica carinata HOM05D009607 ORTHO05D009849 4.9e-36 154.5 118 74.6
BraA02t05266Z Brassica rapa HOM05D009607 ORTHO05D009849 1.4e-35 152.9 119 76.5
BcaC03g13422 Brassica carinata HOM05D009607 ORTHO05D009849 4.2e-35 151.4 119 75.6
A02p02940 Brassica napus HOM05D009607 ORTHO05D009849 4.2e-35 151.4 119 75.6
C02p07580 Brassica napus HOM05D009607 ORTHO05D009849 4.2e-35 151.4 119 75.6
BolC2t06691H Brassica oleracea HOM05D009607 ORTHO05D009849 4.2e-35 151.4 119 75.6
AL6G26040 Arabidopsis lyrata HOM05D009607 ORTHO05D009849 1.0e-33 146.7 107 75.7
Thhalv10016066m.g Eutrema salsugineum HOM05D009607 ORTHO05D009849 1.1e-32 143.3 114 71.9
BcaB08g36918 Brassica carinata HOM05D009607 ORTHO05D009849 1.5e-32 142.9 112 74.1
BcaC04g18976 Brassica carinata HOM05D009607 ORTHO05D009849 1.5e-32 142.9 112 74.1
AT5G15190 Arabidopsis thaliana HOM05D009607 ORTHO05D009849 3.3e-32 141.7 110 70.9
C09p61950 Brassica napus HOM05D009607 ORTHO05D009849 4.8e-31 137.9 111 70.3
BcaC04g18975 Brassica carinata HOM05D009607 ORTHO05D009849 1.4e-30 136.3 111 69.4
BolC9t59034H Brassica oleracea HOM05D009607 ORTHO05D009849 1.4e-30 136.3 111 69.4
A10p23660 Brassica napus HOM05D009607 ORTHO05D009849 1.8e-30 136.0 111 68.5
BraA10t44430Z Brassica rapa HOM05D009607 ORTHO05D009849 1.8e-30 136.0 111 68.5
THA.LOC104821033 Tarenaya hassleriana HOM05D009607 ORTHO05D009849 4.5e-29 131.3 118 63.6
Carub.0006s1337 Capsella rubella HOM05D009607 ORTHO05D009849 1.7e-28 129.4 116 70.7
THA.LOC104822523 Tarenaya hassleriana HOM05D009607 ORTHO05D009849 2.4e-27 125.6 116 62.1
Aa31LG11G14370 Aethionema arabicum HOM05D009607 ORTHO05D009849 5.1e-25 117.9 112 61.6
BcaB01g05073 Brassica carinata HOM05D009607 ORTHO05D009849 3.7e-23 111.7 58 98.3
BcaB01g05070 Brassica carinata HOM05D001645 ORTHO05D001749 6.3e-15 84.3 48 93.8
Cpa.g.sc14.11 Carica papaya HOM05D008650 ORTHO05D009849 4.2e-11 71.6 114 45.6
Manes.17G025188 Manihot esculenta HOM05D008650 ORTHO05D009849 2.3e-09 65.9 104 43.3
Prupe.3G269200 Prunus persica HOM05D008650 ORTHO05D009849 5.1e-09 64.7 92 42.4
CANSAT64G2373 Cannabis sativa HOM05D008650 ORTHO05D009849 2.5e-08 62.4 88 43.2
Eucgr.I01937 Eucalyptus grandis HOM05D008650 ORTHO05D009849 4.3e-08 61.6 113 39.8
Manes.15G175100 Manihot esculenta HOM05D008650 ORTHO05D009849 1.3e-07 60.1 112 41.1
Atru.chr8.210 Acer truncatum HOM05D009607 ORTHO05D009849 6.3e-07 57.8 95 34.7
Ciclev10013107m.g Citrus clementina HOM05D008650 ORTHO05D009849 8.2e-07 57.4 95 42.1
PGR142G1264 Punica granatum HOM05D009607 ORTHO05D009849 1.4e-06 56.6 119 38.7
FvH4_6g48930 Fragaria vesca HOM05D008650 ORTHO05D009849 2.4e-06 55.8 104 41.3
FAN14G3064 Fragaria x ananassa HOM05D008650 ORTHO05D009849 3.1e-06 55.5 102 43.1
Actinidia06084 Actinidia chinensis HOM05D008650 ORTHO05D009849 6.9e-06 54.3 95 45.3
COL.COLO4_04788 Corchorus olitorius HOM05D015048 ORTHO05D009849 6.9e-06 54.3 110 39.1
Rhsim10G0040300 Rhododendron simsii HOM05D008650 ORTHO05D009849 6.9e-06 54.3 85 45.9
FAN02G1277 Fragaria x ananassa HOM05D008650 ORTHO05D009849 9.1e-06 53.9 103 36.9


User provided reference genes

Program Settings