Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05008 Brassica carinata HOM05D004418 ORTHO05D005222 4.9e-140 501.1 252 100.0
C03p08770 Brassica napus HOM05D004418 ORTHO05D005222 1.0e-137 493.4 249 99.6
A03p07540 Brassica napus HOM05D004418 ORTHO05D005222 1.2e-135 486.5 250 98.8
BolC3t13373H Brassica oleracea HOM05D004418 ORTHO05D005222 1.2e-135 486.5 256 96.9
BraA03t10082Z Brassica rapa HOM05D004418 ORTHO05D005222 2.0e-133 479.2 257 95.7
BolC9t58946H Brassica oleracea HOM05D004418 ORTHO05D005222 3.2e-123 445.3 250 90.0
A10p23020 Brassica napus HOM05D004418 ORTHO05D005222 5.4e-123 444.5 250 90.0
BraA10t44371Z Brassica rapa HOM05D004418 ORTHO05D005222 5.4e-123 444.5 250 90.0
C09p60990 Brassica napus HOM05D004418 ORTHO05D005222 1.6e-122 443.0 250 89.6
BcaC04g18914 Brassica carinata HOM05D004418 ORTHO05D005222 6.0e-122 441.0 250 89.6
Thhalv10014096m.g Eutrema salsugineum HOM05D004418 ORTHO05D005222 3.6e-119 431.8 250 89.2
Sp6g28100 Schrenkiella parvula HOM05D004418 ORTHO05D005222 1.4e-115 419.9 251 87.3
AL6G26910 Arabidopsis lyrata HOM05D004418 ORTHO05D005222 3.0e-113 412.1 253 85.4
AT5G16030 Arabidopsis thaliana HOM05D004418 ORTHO05D005222 3.9e-113 411.8 252 83.7
CARHR197280 Cardamine hirsuta HOM05D004418 ORTHO05D005222 6.6e-113 411.0 253 84.6
BcaNung02220 Brassica carinata HOM05D004418 ORTHO05D005222 1.5e-112 409.8 250 85.2
BcaB08g36881 Brassica carinata HOM05D004418 ORTHO05D005222 8.1e-111 404.1 252 84.1
BcaC03g18465 Brassica carinata HOM05D004418 ORTHO05D005222 1.4e-110 403.3 250 82.8
C02p08130 Brassica napus HOM05D004418 ORTHO05D005222 1.4e-110 403.3 250 82.8
A02p03360 Brassica napus HOM05D004418 ORTHO05D005222 1.7e-108 396.4 252 82.5
Carub.0006s1422 Capsella rubella HOM05D004418 ORTHO05D005222 8.4e-108 394.0 252 82.9
BraA02t05307Z Brassica rapa HOM05D004418 ORTHO05D005222 4.2e-107 391.7 253 82.2
BolC2t06735H Brassica oleracea HOM05D004418 ORTHO05D005222 5.4e-107 391.3 266 78.2
Aa31LG11G13580 Aethionema arabicum HOM05D004418 ORTHO05D005222 1.4e-86 323.6 252 71.4
THA.LOC104803001 Tarenaya hassleriana HOM05D004418 ORTHO05D005222 2.6e-85 319.3 250 72.4
Aa31LG5G13000 Aethionema arabicum HOM05D004418 ORTHO05D005222 8.5e-76 287.7 253 63.6
CARHR076500 Cardamine hirsuta HOM05D004418 ORTHO05D005222 1.4e-67 260.4 255 60.4
AT3G02500 Arabidopsis thaliana HOM05D004418 ORTHO05D005222 3.3e-64 249.2 251 59.0
AL3G11860 Arabidopsis lyrata HOM05D004418 ORTHO05D005222 4.4e-64 248.8 252 60.7
Manes.01G108300 Manihot esculenta HOM05D004418 ORTHO05D005222 1.5e-61 240.4 251 59.0
Cpa.g.sc179.25 Carica papaya HOM05D004418 ORTHO05D005222 1.9e-59 233.4 249 58.2
Thecc.04G137500 Theobroma cacao HOM05D004418 ORTHO05D005222 2.5e-59 233.0 250 57.2
Gohir.A07G071400 Gossypium hirsutum HOM05D004418 ORTHO05D005222 7.2e-59 231.5 249 57.4
COL.COLO4_16191 Corchorus olitorius HOM05D004418 ORTHO05D005222 1.2e-58 230.7 249 57.0
Cfa007945 Carpinus fangiana HOM05D004418 ORTHO05D005222 2.7e-58 229.6 251 57.8
Gohir.D07G075900 Gossypium hirsutum HOM05D004418 ORTHO05D005222 2.7e-58 229.6 249 56.6
Haze_14129 Corylus avellana HOM05D004418 ORTHO05D005222 6.1e-58 228.4 238 60.5
Gorai.001G080100 Gossypium raimondii HOM05D004418 ORTHO05D005222 1.0e-57 227.6 249 56.2
ClCG11G005360 Citrullus lanatus HOM05D004418 ORTHO05D005222 2.3e-57 226.5 244 57.4
CiPaw.03G059700 Carya illinoinensis HOM05D004418 ORTHO05D005222 5.2e-57 225.3 252 56.0
CiPaw.04G040400 Carya illinoinensis HOM05D004418 ORTHO05D005222 1.1e-56 224.2 235 58.7
Dinv34848 Davidia involucrata HOM05D004418 ORTHO05D005222 1.1e-56 224.2 252 58.3
ClCG05G012070 Citrullus lanatus HOM05D004418 ORTHO05D005222 1.5e-56 223.8 251 55.0
Cc07_g09010 Coffea canephora HOM05D004418 ORTHO05D005222 2.6e-56 223.0 238 59.7
Carub.0003s0161 Capsella rubella HOM05D004418 ORTHO05D005222 4.4e-56 222.2 253 56.5
GSVIVG01036443001 Vitis vinifera HOM05D004418 ORTHO05D005222 4.4e-56 222.2 253 56.9
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 1.7e-55 220.3 243 57.2
Nitab4.5_0008781g0030 Nicotiana tabacum HOM05D004418 ORTHO05D005222 2.2e-55 219.9 239 56.9
QL02p052558 Quercus lobata HOM05D004418 ORTHO05D005222 2.2e-55 219.9 251 55.4
TAR462G0001 Trochodendron aralioides HOM05D004418 ORTHO05D005222 2.2e-55 219.9 248 56.9
arahy.Tifrunner.gnm1.ann1.FZV4HQ Arachis hypogaea HOM05D004418 ORTHO05D005222 2.8e-55 219.5 250 56.0
arahy.Tifrunner.gnm1.ann1.I4UW8B Arachis hypogaea HOM05D004418 ORTHO05D005222 2.8e-55 219.5 250 56.0
CsaV3_3G020330 Cucumis sativus L. HOM05D004418 ORTHO05D005222 3.7e-55 219.2 249 53.4
Lj1g0022779 Lotus japonicus HOM05D004418 ORTHO05D005222 4.8e-55 218.8 249 55.0
Ciclev10012140m.g Citrus clementina HOM05D004418 ORTHO05D005222 8.2e-55 218.0 261 57.1
Nn4g23746 Nelumbo nucifera HOM05D004418 ORTHO05D005222 8.2e-55 218.0 251 55.0
Duzib133G1448 Durio zibethinus HOM05D004418 ORTHO05D005222 1.8e-54 216.9 269 50.9
Nitab4.5_0004118g0100 Nicotiana tabacum HOM05D004418 ORTHO05D005222 1.8e-54 216.9 240 55.4
Prupe.3G239700 Prunus persica HOM05D004418 ORTHO05D005222 1.8e-54 216.9 251 55.8
MELO3C023762.2 Cucumis melo HOM05D004418 ORTHO05D005222 2.4e-54 216.5 249 52.6
Oeu030758.1 Olea europaea HOM05D004418 ORTHO05D005222 3.1e-54 216.1 244 54.9
Psat3g190400 Pisum sativum HOM05D004418 ORTHO05D005222 5.3e-54 215.3 237 56.5
MD17G1074300 Malus domestica HOM05D004418 ORTHO05D005222 9.1e-54 214.5 253 55.3
Medtr7g018370 Medicago truncatula HOM05D004418 ORTHO05D005222 1.2e-53 214.2 236 57.2
BcaC01g04442 Brassica carinata HOM05D004418 ORTHO05D005222 2.0e-53 213.4 251 54.6
RcHm_v2.0_Chr2g0163131 Rosa chinensis HOM05D004418 ORTHO05D005222 2.0e-53 213.4 235 57.0
CANSAT64G2567 Cannabis sativa HOM05D004418 ORTHO05D005222 2.6e-53 213.0 237 56.5
CsaV3_5G039140 Cucumis sativus L. HOM05D004418 ORTHO05D005222 2.6e-53 213.0 229 57.6
Sabra04G0078200 Salix brachista HOM05D004418 ORTHO05D005222 2.6e-53 213.0 255 55.3
Sopen02g014090 Solanum pennellii HOM05D004418 ORTHO05D005222 3.5e-53 212.6 234 54.7
VMungo1383G2014 Vigna mungo HOM05D004418 ORTHO05D005222 3.5e-53 212.6 224 57.6
Glyma.18G281000 Glycine max HOM05D004418 ORTHO05D005222 5.9e-53 211.8 249 54.2
Hma1.2p1_0550F.1_g177250 Hydrangea macrophylla HOM05D004418 ORTHO05D005222 5.9e-53 211.8 251 53.4
Solyc02g063030.4 Solanum lycopersicum HOM05D004418 ORTHO05D005222 2.2e-52 209.9 235 54.9
CAN.G358.137 Capsicum annuum HOM05D004418 ORTHO05D005222 8.5e-52 208.0 237 54.4
Glyma.08G256900 Glycine max HOM05D004418 ORTHO05D005222 8.5e-52 208.0 228 57.0
TPR.G4552 Trifolium pratense HOM05D004418 ORTHO05D005222 8.5e-52 208.0 247 54.7
Dinv33929 Davidia involucrata HOM05D004418 ORTHO05D005222 1.1e-51 207.6 249 57.0
MD09G1084800 Malus domestica HOM05D004418 ORTHO05D005222 1.1e-51 207.6 253 54.5
Potri.017G112600 Populus trichocarpa HOM05D004418 ORTHO05D005222 1.5e-51 207.2 254 53.5
Actinidia15868 Actinidia chinensis HOM05D004418 ORTHO05D005222 1.9e-51 206.8 239 55.6
FAN02G0751 Fragaria x ananassa HOM05D004418 ORTHO05D005222 1.9e-51 206.8 236 55.9
Eucgr.F02480 Eucalyptus grandis HOM05D004418 ORTHO05D005222 3.2e-51 206.1 248 52.0
FAN14G2637 Fragaria x ananassa HOM05D004418 ORTHO05D005222 3.2e-51 206.1 235 55.7
Sed0007454 Sechium edule HOM05D004418 ORTHO05D005222 3.2e-51 206.1 239 53.6
FvH4_6g45350 Fragaria vesca HOM05D004418 ORTHO05D005222 4.2e-51 205.7 235 55.7
C03p40110 Brassica napus HOM05D004418 ORTHO05D005222 1.2e-50 204.1 250 52.4
BolC3t16277H Brassica oleracea HOM05D004418 ORTHO05D005222 1.2e-50 204.1 250 52.4
BraA03t12466Z Brassica rapa HOM05D004418 ORTHO05D005222 1.2e-50 204.1 250 51.2
FAN05G3990 Fragaria x ananassa HOM05D004418 ORTHO05D005222 1.2e-50 204.1 235 55.3
Oeu052993.1 Olea europaea HOM05D004418 ORTHO05D005222 1.2e-50 204.1 227 55.1
Sopen02g030440 Solanum pennellii HOM05D004418 ORTHO05D005222 1.6e-50 203.8 240 55.0
Solyc02g085750.4 Solanum lycopersicum HOM05D004418 ORTHO05D005222 2.1e-50 203.4 255 52.9
A03p32980 Brassica napus HOM05D004418 ORTHO05D005222 3.6e-50 202.6 250 51.6
CSS0011812 Camellia sinensis var. sinensis HOM05D004418 ORTHO05D005222 3.6e-50 202.6 263 53.2
Phvul.004G062900 Phaseolus vulgaris HOM05D004418 ORTHO05D005222 4.7e-50 202.2 248 52.0
Sed0007873 Sechium edule HOM05D004418 ORTHO05D005222 6.1e-50 201.8 241 49.0
Lalb_Chr06g0174671 Lupinus albus HOM05D004418 ORTHO05D005222 8.0e-50 201.4 257 49.8
Nitab4.5_0000628g0180 Nicotiana tabacum HOM05D004418 ORTHO05D005222 8.0e-50 201.4 249 52.2
Atru.chr8.826 Acer truncatum HOM05D004418 ORTHO05D005222 1.4e-49 200.7 216 59.3
Glyma.19G045400 Glycine max HOM05D004418 ORTHO05D005222 5.2e-49 198.7 252 49.2
Gohir.D11G168666 Gossypium hirsutum HOM05D004418 ORTHO05D005222 5.2e-49 198.7 250 51.6
Glyma.13G046900 Glycine max HOM05D004418 ORTHO05D005222 8.8e-49 198.0 252 50.0
Gorai.007G180200 Gossypium raimondii HOM05D004418 ORTHO05D005222 1.5e-48 197.2 249 50.6
Actinidia36309 Actinidia chinensis HOM05D004418 ORTHO05D005222 2.0e-48 196.8 231 54.5
Phvul.008G020100 Phaseolus vulgaris HOM05D004418 ORTHO05D005222 2.0e-48 196.8 216 56.5
Potri.004G102200 Populus trichocarpa HOM05D004418 ORTHO05D005222 2.0e-48 196.8 254 51.6
EL10Ac2g04606 Beta vulgaris HOM05D004418 ORTHO05D005222 2.6e-48 196.4 239 53.6
CSS0030087 Camellia sinensis var. sinensis HOM05D004418 ORTHO05D005222 7.5e-48 194.9 279 50.5
Gohir.A11G162400 Gossypium hirsutum HOM05D004418 ORTHO05D005222 7.5e-48 194.9 249 50.2
VMungo0464G1669 Vigna mungo HOM05D004418 ORTHO05D005222 7.5e-48 194.9 226 54.0
ECA246G2173 Erigeron canadensis HOM05D004418 ORTHO05D005222 9.7e-48 194.5 233 55.4
Nn3g17760 Nelumbo nucifera HOM05D004418 ORTHO05D005222 1.3e-47 194.1 255 51.0
Ah.10g037550 Amaranthus hybridus HOM05D004418 ORTHO05D005222 2.2e-47 193.4 252 52.0
HanXRQChr12g0376561 Helianthus annuus HOM05D004418 ORTHO05D005222 2.8e-47 193.0 239 50.6
Sabra17G0093300 Salix brachista HOM05D004418 ORTHO05D005222 3.7e-47 192.6 257 53.7
PGSC0003DMG400024185 Solanum tuberosum HOM05D004418 ORTHO05D005222 3.7e-47 192.6 262 48.5
MSTRG.23562 Avicennia marina HOM05D004418 ORTHO05D005222 4.8e-47 192.2 250 52.0
DCAR_017217 Daucus carota HOM05D004418 ORTHO05D005222 6.3e-47 191.8 229 54.6
CSS0000095 Camellia sinensis var. sinensis HOM05D004418 ORTHO05D005222 1.1e-46 191.0 264 51.1
TAR278G0004 Trochodendron aralioides HOM05D004418 ORTHO05D005222 1.8e-46 190.3 248 52.0
CAN.G23.16 Capsicum annuum HOM05D004418 ORTHO05D005222 4.1e-46 189.1 233 51.1
BcaC01g04556 Brassica carinata HOM05D004418 ORTHO05D005222 2.7e-45 186.4 250 48.0
TWI75G1693 Tripterygium wilfordii HOM05D004418 ORTHO05D005222 1.0e-44 184.5 245 46.9
Aqoxy3G00366 Aquilegia oxysepala HOM05D004418 ORTHO05D005222 1.7e-44 183.7 219 51.6
Lj2g0026691 Lotus japonicus HOM05D004418 ORTHO05D005222 1.5e-43 180.6 252 48.8
Psat1g012960 Pisum sativum HOM05D004418 ORTHO05D005222 1.9e-43 180.3 252 49.2
Nitab4.5_0007207g0030 Nicotiana tabacum HOM05D004418 ORTHO05D005222 3.2e-43 179.5 263 48.3
Lalb_Chr10g0092251 Lupinus albus HOM05D004418 ORTHO05D005222 4.2e-43 179.1 237 51.9
Medtr6g017240 Medicago truncatula HOM05D004418 ORTHO05D005222 4.2e-43 179.1 239 49.4
Peaxi162Scf01327g00136 Petunia axillaris HOM05D004418 ORTHO05D005222 4.2e-43 179.1 252 50.0
Aqoxy3G03921 Aquilegia oxysepala HOM05D004418 ORTHO05D005222 5.5e-43 178.7 271 46.9
MELO3C022089.2 Cucumis melo HOM05D004418 ORTHO05D005222 9.4e-43 177.9 152 65.8
MSTRG.3576 Avicennia marina HOM05D004418 ORTHO05D005222 2.7e-42 176.4 249 49.0
TPR.G32452 Trifolium pratense HOM05D004418 ORTHO05D005222 2.7e-42 176.4 244 48.8
Migut.L00303 Erythranthe guttata HOM05D004418 ORTHO05D005222 3.6e-42 176.0 222 51.8
PGR042G3608 Punica granatum HOM05D004418 ORTHO05D005222 1.0e-41 174.5 213 55.4
PSO017G3409 Papaver somniferum HOM05D004418 ORTHO05D005222 1.5e-40 170.6 245 48.6
Lj4A194T37 Lonicera japonica HOM05D004418 ORTHO05D005222 4.4e-40 169.1 232 53.0
Hund13733 Selenicereus undatus HOM05D004418 ORTHO05D005222 1.3e-39 167.5 251 47.8
Lsat_1_v5_gn_3_80201 Lactuca sativa HOM05D004418 ORTHO05D005222 1.7e-39 167.2 175 59.4
Peaxi162Scf00501g00012 Petunia axillaris HOM05D004418 ORTHO05D005222 6.3e-39 165.2 234 49.1
PSO478G2162 Papaver somniferum HOM05D004418 ORTHO05D005222 1.4e-38 164.1 233 48.5
SGA_v2.0_scaffold33G13429 Striga asiatica HOM05D004418 ORTHO05D005222 1.4e-38 164.1 243 45.3
Migut.H00200 Erythranthe guttata HOM05D004418 ORTHO05D005222 2.0e-37 160.2 234 46.6
TWI79G1555 Tripterygium wilfordii HOM05D004418 ORTHO05D005222 5.9e-37 158.7 274 42.3
PGR004G1179 Punica granatum HOM05D004418 ORTHO05D005222 9.5e-35 151.4 256 44.1
MBI09_g05206_MAGBIO Magnolia biondii HOM05D004418 ORTHO05D005222 4.0e-33 146.0 254 40.2
SalBow5G1629 Salvia bowleyana HOM05D004418 ORTHO05D005222 1.7e-31 140.6 208 48.1
arahy.Tifrunner.gnm1.ann1.SB4BUV Arachis hypogaea HOM05D004418 ORTHO05D005222 1.9e-27 127.1 219 43.4
vmacro05572 Vaccinium macrocarpon HOM05D004418 ORTHO05D005222 1.6e-26 124.0 180 45.6
Ah.16g101950 Amaranthus hybridus HOM05D004418 ORTHO05D005222 2.1e-26 123.6 149 52.3
SalBow3G2364 Salvia bowleyana HOM05D004418 ORTHO05D005222 2.2e-23 113.6 196 41.8
SalBow3G3548 Salvia bowleyana HOM05D004418 ORTHO05D005222 2.2e-23 113.6 202 42.1
Oeu052991.1 Olea europaea HOM05D004418 ORTHO05D005222 7.0e-22 108.6 106 58.5
RcHm_v2.0_Chr4g0404491 Rosa chinensis HOM05D004418 ORTHO05D005222 1.3e-20 104.4 110 56.4
ATR0686G091 Amborella trichopoda HOM05D004418 ORTHO05D005222 3.9e-20 102.8 162 43.8
SGA_v2.0_scaffold49G18089 Striga asiatica HOM05D004418 ORTHO05D005222 3.3e-19 99.8 78 61.5
arahy.Tifrunner.gnm1.ann1.554YPX Arachis hypogaea HOM05D004418 ORTHO05D005222 4.7e-18 95.9 171 40.4
Sc11g0008220 Simmondsia chinensis HOM05D004418 ORTHO05D005222 3.4e-16 89.7 117 49.6
unitig_32.g11894 Utricularia gibba HOM05D004418 ORTHO05D005222 5.4e-14 82.4 58 63.8
CAN.G144.13 Capsicum annuum HOM05D004418 ORTHO05D005222 3.1e-09 66.6 66 62.1


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