Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04957 Brassica carinata HOM05D009118 ORTHO05D011494 3.3e-173 611.7 327 100.0
BcaB01g04959 Brassica carinata HOM05D009118 ORTHO05D011494 6.0e-82 308.5 248 61.3
C03p09400 Brassica napus HOM05D009118 ORTHO05D011494 5.1e-81 305.4 326 56.7
BolC3t13441H Brassica oleracea HOM05D009118 ORTHO05D011494 9.0e-78 294.7 297 59.6
BolC3t13438H Brassica oleracea HOM05D009118 ORTHO05D011494 1.5e-77 293.9 297 56.6
BcaB01g05231 Brassica carinata HOM05D009118 ORTHO05D011494 1.9e-75 287.0 247 57.9
BolC3t13443H Brassica oleracea HOM05D009118 ORTHO05D011494 3.2e-67 259.6 201 65.2
AT5G17080 Arabidopsis thaliana HOM05D009118 ORTHO05D011494 7.2e-51 205.3 268 48.1
BolC3t13434H Brassica oleracea HOM05D009118 ORTHO05D011494 8.5e-44 181.8 145 58.6
BraA03t10138Z Brassica rapa HOM05D009118 ORTHO05D011494 1.8e-41 174.1 204 59.3
AL6G28100 Arabidopsis lyrata HOM05D009118 ORTHO05D011494 3.6e-34 149.8 229 38.0
Carub.0006s1526 Capsella rubella HOM05D009118 ORTHO05D011494 1.5e-32 144.4 264 37.5
AL1G13260 Arabidopsis lyrata HOM05D009118 ORTHO05D011494 5.5e-19 99.4 250 32.8
BolC9t58842H Brassica oleracea HOM05D029610 ORTHO05D026814 6.1e-18 95.9 191 36.6
AL3G17230 Arabidopsis lyrata HOM05D009118 ORTHO05D011494 5.2e-17 92.8 241 30.3
AT5G17140 Arabidopsis thaliana HOM05D009118 ORTHO05D011494 1.2e-16 91.7 111 42.3
AL3G17210 Arabidopsis lyrata HOM05D009118 ORTHO05D011494 3.4e-16 90.1 235 32.3
AT1G03720 Arabidopsis thaliana HOM05D009118 ORTHO05D011494 4.4e-16 89.7 199 31.2
A10p02270 Brassica napus HOM05D009118 ORTHO05D011494 9.8e-16 88.6 225 32.0
C09p60070 Brassica napus HOM05D029610 ORTHO05D026814 1.7e-15 87.8 213 34.3
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 2.2e-15 87.4 190 32.1
BolC5t34750H Brassica oleracea HOM05D009118 ORTHO05D011494 2.2e-15 87.4 222 31.1
C08p14910 Brassica napus HOM05D009118 ORTHO05D011494 2.4e-14 84.0 96 44.8
Thhalv10009679m.g Eutrema salsugineum HOM05D009118 ORTHO05D011494 4.1e-14 83.2 189 31.7
BraA10t42493Z Brassica rapa HOM05D009118 ORTHO05D011494 3.5e-13 80.1 195 32.3
AL6G28180 Arabidopsis lyrata HOM05D009118 ORTHO05D011494 1.0e-12 78.6 81 45.7
C05p60950 Brassica napus HOM05D009118 ORTHO05D011494 1.0e-12 78.6 117 38.5
BolC5t34839H Brassica oleracea HOM05D017090 ORTHO05D018449 7.2e-11 72.4 191 27.2
BcaC05g29804 Brassica carinata HOM05D009118 ORTHO05D011494 2.8e-10 70.5 111 37.8
BraA09t35928Z Brassica rapa HOM05D022762 ORTHO05D023703 8.9e-09 65.5 229 27.9
THA.LOC104801556 Tarenaya hassleriana HOM05D002279 ORTHO05D002644 2.0e-08 64.3 195 31.8
QL10p030265 Quercus lobata HOM05D000069 ORTHO05D011390 4.4e-08 63.2 128 33.6
AT5G17130 Arabidopsis thaliana HOM05D029610 ORTHO05D026814 2.4e-06 57.4 103 35.0
Duzib168G1950 Durio zibethinus HOM05D000069 ORTHO05D011390 2.4e-06 57.4 90 34.4
QL10p029934 Quercus lobata HOM05D000069 ORTHO05D011390 2.4e-06 57.4 128 32.8
BcaC05g30122 Brassica carinata HOM05D017090 ORTHO05D018449 4.1e-06 56.6 88 31.8
THA.LOC104809074 Tarenaya hassleriana HOM05D000069 ORTHO05D025459 5.4e-06 56.2 208 23.1
BcaB08g36117 Brassica carinata HOM05D022762 ORTHO05D023703 7.0e-06 55.8 233 25.3
Nn1g04473 Nelumbo nucifera HOM05D000069 ORTHO05D008115 7.0e-06 55.8 69 37.7
HanXRQChr03g0088271 Helianthus annuus HOM05D000069 ORTHO05D011862 9.2e-06 55.5 76 40.8


User provided reference genes

Program Settings