Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04955 Brassica carinata HOM05D004201 ORTHO05D009648 2.8e-96 355.5 210 100.0
A03p08190 Brassica napus HOM05D004201 ORTHO05D009648 1.7e-77 293.1 181 81.2
C03p09490 Brassica napus HOM05D004201 ORTHO05D009648 8.6e-74 280.8 166 82.5
BcaB01g05219 Brassica carinata HOM05D004201 ORTHO05D009648 1.1e-73 280.4 166 82.5
BcaB01g05225 Brassica carinata HOM05D004201 ORTHO05D009648 3.3e-73 278.9 167 80.8
BcaB01g05222 Brassica carinata HOM05D004201 ORTHO05D009648 4.3e-73 278.5 166 81.9
BcaB01g05226 Brassica carinata HOM05D004201 ORTHO05D009648 7.3e-73 277.7 165 81.2
A03p08180 Brassica napus HOM05D004201 ORTHO05D009648 2.3e-71 272.7 166 80.1
BcaB01g05224 Brassica carinata HOM05D004201 ORTHO05D009648 4.0e-71 271.9 165 80.6
A03p08140 Brassica napus HOM05D004201 ORTHO05D009648 9.9e-70 267.3 164 80.5
BolC3t13435H Brassica oleracea HOM05D004201 ORTHO05D009648 3.7e-69 265.4 182 72.0
BcaB01g05230 Brassica carinata HOM05D004201 ORTHO05D009648 4.9e-69 265.0 162 79.6
BolC3t13445H Brassica oleracea HOM05D004201 ORTHO05D009648 1.1e-68 263.8 157 81.5
C03p09410 Brassica napus HOM05D004201 ORTHO05D009648 1.9e-68 263.1 162 78.4
BcaB01g05228 Brassica carinata HOM05D004201 ORTHO05D009648 6.6e-66 254.6 184 70.7
A03p08170 Brassica napus HOM05D004201 ORTHO05D009648 9.6e-65 250.8 184 69.6
BraA03t10139Z Brassica rapa HOM05D004201 ORTHO05D009648 2.8e-64 249.2 187 69.5
BcaB01g05221 Brassica carinata HOM05D004201 ORTHO05D009648 3.6e-64 248.8 151 80.8
A03p08200 Brassica napus HOM05D004201 ORTHO05D009648 3.4e-62 242.3 157 75.8
BcaB01g04951 Brassica carinata HOM05D004201 ORTHO05D009648 8.4e-61 237.7 160 71.9
BraA03t10141Z Brassica rapa HOM05D004201 ORTHO05D009648 3.2e-60 235.7 163 72.4
BcaB01g04958 Brassica carinata HOM05D004201 ORTHO05D009648 1.0e-58 230.7 163 71.8
BcaB01g05220 Brassica carinata HOM05D004201 ORTHO05D009648 1.5e-57 226.9 163 70.6
BcaB01g05223 Brassica carinata HOM05D004201 ORTHO05D009648 1.5e-57 226.9 163 70.6
BcaB01g04953 Brassica carinata HOM05D004201 ORTHO05D009648 6.2e-56 221.5 165 68.5
BcaB01g05229 Brassica carinata HOM05D004201 ORTHO05D009648 1.1e-52 210.7 172 62.8
A03p08160 Brassica napus HOM05D004201 ORTHO05D009648 7.1e-52 208.0 159 65.4
C03p09420 Brassica napus HOM05D004201 ORTHO05D009648 4.6e-51 205.3 159 64.8
BcaB01g04956 Brassica carinata HOM05D004201 ORTHO05D009648 1.3e-50 203.8 168 62.5
BcaB01g04954 Brassica carinata HOM05D004201 ORTHO05D009648 5.1e-50 201.8 157 63.1
BcaB01g05218 Brassica carinata HOM05D004201 ORTHO05D009648 8.7e-50 201.1 166 60.8
Carub.0006s1528 Capsella rubella HOM05D004201 ORTHO05D009648 3.8e-45 185.7 159 57.9
C03p09500 Brassica napus HOM05D004201 ORTHO05D009648 4.9e-45 185.3 173 56.6
Carub.0006s1532 Capsella rubella HOM05D004201 ORTHO05D009648 5.1e-42 175.3 160 56.9
AT5G17120 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 5.3e-39 165.2 161 52.8
AT5G17150 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 6.5e-37 158.3 161 50.9
AT5G17090 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 2.5e-36 156.4 153 54.2
CARHR196090 Cardamine hirsuta HOM05D004201 ORTHO05D009648 3.2e-36 156.0 151 54.3
Carub.0006s1527 Capsella rubella HOM05D004201 ORTHO05D009648 7.1e-36 154.8 152 53.3
Carub.0006s1529 Capsella rubella HOM05D004201 ORTHO05D009648 6.0e-35 151.8 152 53.3
BcaB01g05217 Brassica carinata HOM05D004201 ORTHO05D009648 3.0e-34 149.4 159 53.5
BcaB03g13238 Brassica carinata HOM05D004201 ORTHO05D009648 8.7e-34 147.9 163 50.9
C09p60060 Brassica napus HOM05D004201 ORTHO05D009648 1.1e-31 141.0 152 48.7
BolC9t58841H Brassica oleracea HOM05D004201 ORTHO05D009648 1.1e-31 141.0 152 48.7
BcaC06g31919 Brassica carinata HOM05D004201 ORTHO05D009648 1.4e-31 140.6 161 49.1
Aa31LG11G12620 Aethionema arabicum HOM05D004201 ORTHO05D009648 1.8e-31 140.2 147 51.0
BcaC07g38685 Brassica carinata HOM05D004201 ORTHO05D009648 3.1e-31 139.4 161 48.4
BolC8t49120H Brassica oleracea HOM05D004201 ORTHO05D009648 3.1e-31 139.4 161 48.4
A08p33280 Brassica napus HOM05D004201 ORTHO05D009648 4.1e-31 139.0 161 48.4
C08p14870 Brassica napus HOM05D004201 ORTHO05D009648 2.0e-30 136.7 161 47.8
BolC3t13436H Brassica oleracea HOM05D004201 ORTHO05D009648 2.0e-30 136.7 117 60.7
BraA08t35247Z Brassica rapa HOM05D004201 ORTHO05D009648 1.0e-29 134.4 161 48.4
AT5G17110 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 3.8e-29 132.5 156 41.7
Sp6g27080 Schrenkiella parvula HOM05D004201 ORTHO05D009648 1.1e-28 131.0 153 47.7
AL6G28160 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 7.1e-28 128.3 135 53.3
Carub.0006s1530 Capsella rubella HOM05D004201 ORTHO05D009648 1.6e-27 127.1 156 42.9
Carub.0006s1531 Capsella rubella HOM05D004201 ORTHO05D009648 4.6e-27 125.6 156 41.7
AT5G17100 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 6.1e-27 125.2 157 39.5
C03p09480 Brassica napus HOM05D004201 ORTHO05D009648 6.1e-27 125.2 114 60.5
AL6G28110 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 2.3e-26 123.2 157 39.5
AL6G28150 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 3.9e-26 122.5 153 41.8
Thhalv10015849m.g Eutrema salsugineum HOM05D004201 ORTHO05D009648 1.6e-24 117.1 160 40.0
Aa31LG11G12540 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.4e-23 113.2 143 40.6
Aa31LG11G12550 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.4e-23 113.2 146 42.5
Aa31LG11G12490 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.0e-22 110.2 147 42.2
Aa31LG11G12560 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.0e-22 110.2 149 38.9
Aa31LG11G12790 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.6e-22 109.8 146 42.5
Aa31LG11G12500 Aethionema arabicum HOM05D004201 ORTHO05D009648 3.4e-22 109.4 142 40.8
Aa31LG11G12840 Aethionema arabicum HOM05D004201 ORTHO05D009648 3.4e-22 109.4 142 39.4
Aa31LG11G12510 Aethionema arabicum HOM05D004201 ORTHO05D009648 4.5e-22 109.0 142 40.8
Aa31LG11G12800 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.2e-21 106.7 143 39.9
Aa31LG11G12820 Aethionema arabicum HOM05D004201 ORTHO05D009648 1.6e-19 100.5 136 37.5
C03p09430 Brassica napus HOM05D004201 ORTHO05D009648 2.7e-19 99.8 71 64.8
BraA10t44284Z Brassica rapa HOM05D004201 ORTHO05D009648 7.9e-19 98.2 124 43.5
A10p22250 Brassica napus HOM05D004201 ORTHO05D009648 3.9e-18 95.9 124 42.7
BcaB01g04950 Brassica carinata HOM05D004201 ORTHO05D009648 6.7e-18 95.1 100 49.0
Aa31LG11G12530 Aethionema arabicum HOM05D004201 ORTHO05D009648 8.8e-18 94.7 152 36.2
Aa31LG11G12830 Aethionema arabicum HOM05D004201 ORTHO05D009648 2.0e-17 93.6 145 36.6
BcaB08g36118 Brassica carinata HOM05D004201 ORTHO05D009648 2.0e-17 93.6 152 38.2
AL3G16040 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 5.7e-17 92.0 162 38.9
AL3G16370 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 9.7e-17 91.3 158 36.7
BcaC01g06645 Brassica carinata HOM05D004201 ORTHO05D009648 9.7e-17 91.3 166 38.6
Carub.0006s3347 Capsella rubella HOM05D004201 ORTHO05D009648 1.7e-16 90.5 171 38.0
Carub.0006s3348 Capsella rubella HOM05D004201 ORTHO05D009648 1.7e-16 90.5 160 37.5
AL3G16360 Arabidopsis lyrata HOM05D004201 ORTHO05D031360 2.2e-16 90.1 162 37.7
Carub.0006s3346 Capsella rubella HOM05D004201 ORTHO05D009648 4.8e-16 89.0 178 35.4
AL6G37010 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 8.2e-16 88.2 148 39.2
AL6G49220 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 8.2e-16 88.2 160 37.5
AL8G28550 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 8.2e-16 88.2 148 39.2
A05p30050 Brassica napus HOM05D004201 ORTHO05D042104 8.2e-16 88.2 98 50.0
BraA05t19763Z Brassica rapa HOM05D004201 ORTHO05D042104 8.2e-16 88.2 98 50.0
AL3G16010 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 1.4e-15 87.4 158 40.5
AL6G49230 Arabidopsis lyrata HOM05D004201 ORTHO05D009648 1.4e-15 87.4 144 40.3
A03p20510 Brassica napus HOM05D004201 ORTHO05D009648 1.4e-15 87.4 159 39.0
C09p02940 Brassica napus HOM05D004201 ORTHO05D009648 3.1e-15 86.3 166 37.3
Carub.0006s3349 Capsella rubella HOM05D004201 ORTHO05D009648 2.0e-14 83.6 156 37.2
CARHR080560 Cardamine hirsuta HOM05D004201 ORTHO05D011677 1.0e-13 81.3 162 38.3
AL304U10030 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 5.0e-13 79.0 159 35.8
BraA09t35931Z Brassica rapa HOM05D004201 ORTHO05D009648 6.5e-13 78.6 74 55.4
CARHR079820 Cardamine hirsuta HOM05D004201 ORTHO05D011677 6.5e-13 78.6 87 49.4
Thhalv10021511m.g Eutrema salsugineum HOM05D004201 ORTHO05D011677 1.4e-12 77.4 158 37.3
AL1G13240 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 1.9e-12 77.0 156 37.2
AT4G03570 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 1.9e-12 77.0 117 40.2
BcaB02g06909 Brassica carinata HOM05D004201 ORTHO05D012052 4.2e-12 75.9 166 32.5
A10p02260 Brassica napus HOM05D004201 ORTHO05D012052 7.2e-12 75.1 161 34.2
BraA10t42492Z Brassica rapa HOM05D004201 ORTHO05D012052 7.2e-12 75.1 161 34.2
CARHR080810 Cardamine hirsuta HOM05D004201 ORTHO05D014863 1.2e-11 74.3 165 35.8
BcaC05g30121 Brassica carinata HOM05D004201 ORTHO05D011677 1.6e-11 73.9 158 36.1
C05p61800 Brassica napus HOM05D004201 ORTHO05D011677 1.6e-11 73.9 158 36.1
AL3G17220 Arabidopsis lyrata HOM05D004201 ORTHO05D014863 2.7e-11 73.2 124 40.3
BcaC05g30167 Brassica carinata HOM05D004201 ORTHO05D011677 2.7e-11 73.2 158 36.1
AL3G17200 Arabidopsis lyrata HOM05D004201 ORTHO05D014863 3.6e-11 72.8 158 34.8
AT1G03710 Arabidopsis thaliana HOM05D004201 ORTHO05D012052 3.6e-11 72.8 154 34.4
Carub.0001s0281 Capsella rubella HOM05D004201 ORTHO05D012052 3.6e-11 72.8 162 32.7
CARHR079790 Cardamine hirsuta HOM05D004201 ORTHO05D011677 6.1e-11 72.0 83 47.0
BraA09t35929Z Brassica rapa HOM05D004201 ORTHO05D009648 1.0e-10 71.2 153 36.6
BcaC05g29805 Brassica carinata HOM05D014826 ORTHO05D014863 1.4e-10 70.9 92 45.7
A05p41720 Brassica napus HOM05D014826 ORTHO05D014863 1.4e-10 70.9 92 45.7
C05p60930 Brassica napus HOM05D014826 ORTHO05D014863 1.4e-10 70.9 92 45.7
BolC5t34749H Brassica oleracea HOM05D014826 ORTHO05D014863 1.4e-10 70.9 92 45.7
BraA01t04445Z Brassica rapa HOM05D014826 ORTHO05D014863 1.4e-10 70.9 149 36.9
Aa31LG1G23650 Aethionema arabicum HOM05D004201 ORTHO05D011677 1.8e-10 70.5 160 31.2
BraA10t42489Z Brassica rapa HOM05D004201 ORTHO05D012052 2.3e-10 70.1 161 34.8
A10p02210 Brassica napus HOM05D004201 ORTHO05D012052 3.0e-10 69.7 163 34.4
C05p02080 Brassica napus HOM05D004201 ORTHO05D012052 3.0e-10 69.7 165 32.1
BolC5t28985H Brassica oleracea HOM05D004201 ORTHO05D012052 3.0e-10 69.7 165 32.1
BcaC05g30039 Brassica carinata HOM05D014826 ORTHO05D014863 3.9e-10 69.3 93 46.2
Aa31LG11G12520 Aethionema arabicum HOM05D004201 ORTHO05D009648 5.1e-10 68.9 78 44.9
BcaB08g36116 Brassica carinata HOM05D004201 ORTHO05D009648 5.1e-10 68.9 160 35.6
Aa31LG1G23790 Aethionema arabicum HOM05D004201 ORTHO05D011677 6.7e-10 68.6 156 32.7
BolC5t34836H Brassica oleracea HOM05D004201 ORTHO05D011677 6.7e-10 68.6 142 33.8
AL1G13250 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 1.5e-09 67.4 156 34.6
THA.LOC104801148 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 1.5e-09 67.4 160 30.6
THA.LOC104801147 Tarenaya hassleriana HOM05D004201 ORTHO05D012594 2.0e-09 67.0 160 30.6
AL1G13230 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 2.6e-09 66.6 82 41.5
BraA05t22891Z Brassica rapa HOM05D014826 ORTHO05D014863 2.6e-09 66.6 63 54.0
BcaB01g02543 Brassica carinata HOM05D012310 ORTHO05D012594 4.4e-09 65.9 172 32.6
Carub.0003s0573 Capsella rubella HOM05D004201 ORTHO05D014863 4.4e-09 65.9 164 34.1
AL3G16060 Arabidopsis lyrata HOM05D004201 ORTHO05D011677 7.4e-09 65.1 84 38.1
AL1G13200 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 1.7e-08 63.9 82 43.9
AT4G03590 Arabidopsis thaliana HOM05D004201 ORTHO05D009648 2.8e-08 63.2 155 35.5
AL1G13220 Arabidopsis lyrata HOM05D004201 ORTHO05D012052 3.7e-08 62.8 158 31.6
Thhalv10008370m.g Eutrema salsugineum HOM05D004201 ORTHO05D012052 4.8e-08 62.4 145 32.4
BraA05t19067Z Brassica rapa HOM05D004201 ORTHO05D011677 6.3e-08 62.0 156 34.0
BNapus_Darmor_BZH_scaffold_118p00220 Brassica napus HOM05D014826 ORTHO05D014863 8.2e-08 61.6 82 45.1
BcaC05g24515 Brassica carinata HOM05D004201 ORTHO05D012052 1.8e-07 60.5 144 31.2
CARHR079840 Cardamine hirsuta HOM05D004201 ORTHO05D011677 4.1e-07 59.3 154 29.9
CARHR080820 Cardamine hirsuta HOM05D014826 ORTHO05D014863 4.1e-07 59.3 64 50.0
AT4G03565 Arabidopsis thaliana HOM05D012310 ORTHO05D012594 5.3e-07 58.9 163 27.6


User provided reference genes

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