Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04928 Brassica carinata HOM05D009160 ORTHO05D009596 2.2e-66 255.4 121 100.0
BcaB01g04930 Brassica carinata HOM05D009160 ORTHO05D009596 6.5e-66 253.8 121 99.2
BcaB01g04927 Brassica carinata HOM05D009160 ORTHO05D009596 1.4e-65 252.7 121 97.5
BcaB01g04931 Brassica carinata HOM05D009160 ORTHO05D009596 1.4e-65 252.7 121 98.3
BcaB01g04929 Brassica carinata HOM05D009160 ORTHO05D009596 1.0e-63 246.5 121 95.0
BcaB01g05193 Brassica carinata HOM05D009160 ORTHO05D009596 4.0e-55 218.0 123 83.7
C03p09670 Brassica napus HOM05D009160 ORTHO05D009596 4.0e-55 218.0 123 83.7
C03p09690 Brassica napus HOM05D009160 ORTHO05D009596 4.0e-55 218.0 121 85.1
BolC3t13454H Brassica oleracea HOM05D009160 ORTHO05D009596 4.0e-55 218.0 121 84.3
BolC3t13455H Brassica oleracea HOM05D009160 ORTHO05D009596 4.0e-55 218.0 123 83.7
C03p09660 Brassica napus HOM05D009160 ORTHO05D009596 5.2e-55 217.6 121 82.6
BraA03t10152Z Brassica rapa HOM05D009160 ORTHO05D009596 5.2e-55 217.6 121 85.1
BraA03t10149Z Brassica rapa HOM05D009160 ORTHO05D009596 2.0e-54 215.7 125 82.4
A03p08300 Brassica napus HOM05D009160 ORTHO05D009596 5.7e-54 214.2 123 82.9
BcaB01g05201 Brassica carinata HOM05D009160 ORTHO05D009596 7.5e-54 213.8 121 81.0
BolC3t13462H Brassica oleracea HOM05D009160 ORTHO05D009596 7.5e-54 213.8 121 81.0
BcaB01g04933 Brassica carinata HOM05D009160 ORTHO05D009596 3.7e-53 211.5 119 81.5
C03p09720 Brassica napus HOM05D009160 ORTHO05D009596 3.7e-53 211.5 121 80.2
BcaB01g05195 Brassica carinata HOM05D009160 ORTHO05D009596 4.8e-53 211.1 121 80.2
A03p08340 Brassica napus HOM05D009160 ORTHO05D009596 4.8e-53 211.1 121 81.0
BolC3t13458H Brassica oleracea HOM05D009160 ORTHO05D009596 8.2e-53 210.3 121 82.6
BcaB01g05200 Brassica carinata HOM05D009160 ORTHO05D009596 2.4e-52 208.8 123 82.1
BolC3t13461H Brassica oleracea HOM05D009160 ORTHO05D009596 2.4e-52 208.8 123 82.1
C03p09680 Brassica napus HOM05D009160 ORTHO05D009596 3.1e-52 208.4 121 79.3
C03p09710 Brassica napus HOM05D009160 ORTHO05D009596 5.3e-52 207.6 123 82.1
BolC3t13456H Brassica oleracea HOM05D009160 ORTHO05D009596 7.0e-52 207.2 121 78.5
BraA03t10150Z Brassica rapa HOM05D009160 ORTHO05D009596 5.9e-51 204.1 121 77.7
A03p08310 Brassica napus HOM05D009160 ORTHO05D009596 3.2e-49 198.4 121 74.4
A03p08320 Brassica napus HOM05D009160 ORTHO05D009596 9.4e-49 196.8 106 85.8
Thhalv10015886m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 4.4e-30 134.8 127 57.5
BcaB01g04926 Brassica carinata HOM05D009160 ORTHO05D009596 8.6e-26 120.6 79 79.7
SpUn0004_0070 Schrenkiella parvula HOM05D009160 ORTHO05D009596 4.3e-25 118.2 125 48.8
SpUn0066_0020 Schrenkiella parvula HOM05D009160 ORTHO05D009596 4.3e-25 118.2 125 48.8
Sp6g26890 Schrenkiella parvula HOM05D009160 ORTHO05D009596 5.2e-23 111.3 126 47.6
Thhalv10015780m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 1.5e-17 93.2 129 45.0
Thhalv10014860m.g Eutrema salsugineum HOM05D009029 ORTHO05D009596 6.8e-15 84.3 168 35.7
CARHR195870 Cardamine hirsuta HOM05D009029 ORTHO05D009596 3.7e-13 78.6 160 34.4
BcaB08g36782 Brassica carinata HOM05D009029 ORTHO05D009596 1.4e-12 76.6 136 36.0
A10p22070 Brassica napus HOM05D009029 ORTHO05D009596 1.4e-12 76.6 151 36.4
BolC1t01146H Brassica oleracea HOM05D009029 ORTHO05D009596 4.1e-12 75.1 151 35.8
BcaC09g51570 Brassica carinata HOM05D009029 ORTHO05D009596 5.4e-12 74.7 150 36.0
C09p59860 Brassica napus HOM05D009029 ORTHO05D009596 5.4e-12 74.7 151 35.8
Carub.0006s1555 Capsella rubella HOM05D009029 ORTHO05D009596 7.1e-12 74.3 158 33.5
BcaB08g36781 Brassica carinata HOM05D009029 ORTHO05D009596 1.2e-11 73.6 166 32.5
C09p59840 Brassica napus HOM05D009029 ORTHO05D009596 1.2e-11 73.6 150 35.3
AL6G28410 Arabidopsis lyrata HOM05D009029 ORTHO05D009596 1.6e-11 73.2 161 34.8
CARHR195880 Cardamine hirsuta HOM05D009029 ORTHO05D009596 7.8e-11 70.9 84 46.4
AT5G17340 Arabidopsis thaliana HOM05D009029 ORTHO05D009596 1.0e-10 70.5 161 34.8
Sp6g26880 Schrenkiella parvula HOM05D009029 ORTHO05D009596 1.3e-10 70.1 157 33.1
BraA02t05377Z Brassica rapa HOM05D009029 ORTHO05D009596 3.0e-10 68.9 166 32.5
BraA10t44266Z Brassica rapa HOM05D009029 ORTHO05D009596 3.9e-10 68.6 137 35.8
BcaC03g18552 Brassica carinata HOM05D009029 ORTHO05D009596 5.1e-10 68.2 166 32.5
A02p04140 Brassica napus HOM05D009029 ORTHO05D009596 5.1e-10 68.2 166 32.5
C02p08990 Brassica napus HOM05D009029 ORTHO05D009596 5.1e-10 68.2 166 32.5
BolC2t06808H Brassica oleracea HOM05D009029 ORTHO05D009596 5.1e-10 68.2 166 32.5
BolC9t58822H Brassica oleracea HOM05D009029 ORTHO05D009596 6.6e-10 67.8 138 35.5
BcaB05g23261 Brassica carinata HOM05D009029 ORTHO05D009596 2.5e-09 65.9 166 31.3
THA.LOC104820858 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 1.4e-07 60.1 87 32.2
BcaC04g18803 Brassica carinata HOM05D009029 ORTHO05D009596 2.3e-07 59.3 151 33.8
THA.LOC104827231 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 2.6e-06 55.8 143 26.6


User provided reference genes

Program Settings