Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04604 Brassica carinata HOM05D000015 ORTHO05D091847 6.1e-35 150.2 73 100.0
C03p13930 Brassica napus HOM05D000015 ORTHO05D000270 2.6e-33 144.8 70 98.6
BolC3t13841H Brassica oleracea HOM05D000015 ORTHO05D000270 4.4e-33 144.1 69 100.0
BraA03t10498Z Brassica rapa HOM05D000015 ORTHO05D000270 4.4e-33 144.1 69 100.0
A03p11860 Brassica napus HOM05D000015 ORTHO05D000270 7.5e-33 143.3 70 97.1
BcaB01g04605 Brassica carinata HOM05D000015 ORTHO05D000270 1.3e-32 142.5 70 97.1
Sp6g20860 Schrenkiella parvula HOM05D000015 ORTHO05D000270 3.6e-27 124.4 69 85.5
AL48U10040 Arabidopsis lyrata HOM05D000015 ORTHO05D000270 5.2e-26 120.6 71 80.3
AL8G35560 Arabidopsis lyrata HOM05D000015 ORTHO05D000270 5.2e-26 120.6 72 79.2
CARHR285410 Cardamine hirsuta HOM05D000015 ORTHO05D000270 2.6e-25 118.2 69 81.2
AT5G59130 Arabidopsis thaliana HOM05D000015 ORTHO05D000270 4.9e-24 114.0 70 77.1
Carub.0008s1982 Capsella rubella HOM05D000015 ORTHO05D000270 1.2e-22 109.4 69 75.4
Thhalv10015748m.g Eutrema salsugineum HOM05D000015 ORTHO05D000270 8.0e-19 96.7 62 74.2
Sp6g20520 Schrenkiella parvula HOM05D000015 ORTHO05D000270 6.1e-11 70.5 71 52.1
BcaNung06495 Brassica carinata HOM05D000015 ORTHO05D093875 4.0e-10 67.8 70 50.0
A10p15480 Brassica napus HOM05D000015 ORTHO05D000270 4.0e-10 67.8 72 47.2
BraA10t43687Z Brassica rapa HOM05D000015 ORTHO05D000270 4.0e-10 67.8 72 47.2
Aa31LG10G12920 Aethionema arabicum HOM05D000015 ORTHO05D000270 8.9e-10 66.6 70 50.0
BolC9t57957H Brassica oleracea HOM05D000015 ORTHO05D000270 8.9e-10 66.6 72 47.2
AL8G35580 Arabidopsis lyrata HOM05D000015 ORTHO05D000270 2.0e-09 65.5 75 48.0
Aa31LG8G12990 Aethionema arabicum HOM05D000015 ORTHO05D000270 2.6e-09 65.1 71 49.3
Aa31sc55G80 Aethionema arabicum HOM05D000015 ORTHO05D000270 4.4e-09 64.3 73 50.7
Aa31sc23G510 Aethionema arabicum HOM05D000015 ORTHO05D000270 7.5e-09 63.5 72 48.6
AL8G35600 Arabidopsis lyrata HOM05D000015 ORTHO05D000270 1.7e-08 62.4 73 49.3
Thhalv10010149m.g Eutrema salsugineum HOM05D000015 ORTHO05D000270 1.7e-08 62.4 73 46.6
Carub.0005s1307 Capsella rubella HOM05D000015 ORTHO05D000270 2.2e-08 62.0 73 47.9
CARHR155420 Cardamine hirsuta HOM05D000015 ORTHO05D000270 3.7e-08 61.2 71 49.3
AT3G46850 Arabidopsis thaliana HOM05D000015 ORTHO05D000270 8.3e-08 60.1 71 47.9
CARHR285530 Cardamine hirsuta HOM05D000015 ORTHO05D000270 8.3e-08 60.1 73 45.2
Aa31LG1G12040 Aethionema arabicum HOM05D000015 ORTHO05D000270 1.1e-07 59.7 70 47.1
AT5G59100 Arabidopsis thaliana HOM05D000015 ORTHO05D000270 1.1e-07 59.7 73 46.6
Carub.0008s1984 Capsella rubella HOM05D000015 ORTHO05D000270 1.1e-07 59.7 73 46.6
Thhalv10015939m.g Eutrema salsugineum HOM05D000015 ORTHO05D000270 1.1e-07 59.7 61 44.3
Aa31LG4G15790 Aethionema arabicum HOM05D000015 ORTHO05D000270 1.9e-07 58.9 71 45.1
Thhalv10015507m.g Eutrema salsugineum HOM05D000015 ORTHO05D000270 1.9e-07 58.9 71 46.5
AL5G25860 Arabidopsis lyrata HOM05D000015 ORTHO05D000270 2.4e-07 58.5 73 47.9
AT3G46840 Arabidopsis thaliana HOM05D000015 ORTHO05D000270 2.4e-07 58.5 71 46.5
BolC3t13840H Brassica oleracea HOM05D000015 ORTHO05D000270 2.4e-07 58.5 70 50.0
BraA03t10497Z Brassica rapa HOM05D000015 ORTHO05D000270 2.4e-07 58.5 70 50.0
AUR62020052 Chenopodium quinoa HOM05D000015 ORTHO05D000270 2.4e-07 58.5 75 41.3
THA.LOC104799419 Tarenaya hassleriana HOM05D000015 ORTHO05D000270 2.4e-07 58.5 72 44.4
Aa31sc23G490 Aethionema arabicum HOM05D000015 ORTHO05D000270 3.2e-07 58.2 71 45.1
AL5G25850 Arabidopsis lyrata HOM05D000015 ORTHO05D000270 3.2e-07 58.2 71 46.5
Aa31sc23G520 Aethionema arabicum HOM05D000015 ORTHO05D000270 5.4e-07 57.4 70 48.6
BcaB05g22485 Brassica carinata HOM05D000015 ORTHO05D000270 5.4e-07 57.4 70 45.7
BcaC04g19810 Brassica carinata HOM05D000015 ORTHO05D000270 7.0e-07 57.0 71 52.1
C09p51430 Brassica napus HOM05D000015 ORTHO05D000270 7.0e-07 57.0 71 52.1
BolC9t58003H Brassica oleracea HOM05D000015 ORTHO05D000270 7.0e-07 57.0 71 52.1
BcaB01g04603 Brassica carinata HOM05D000015 ORTHO05D000270 9.2e-07 56.6 73 46.6
BcaB08g36281 Brassica carinata HOM05D000015 ORTHO05D000270 1.6e-06 55.8 69 50.7
A10p16370 Brassica napus HOM05D000015 ORTHO05D000270 1.6e-06 55.8 71 52.1
BraA10t43724Z Brassica rapa HOM05D000015 ORTHO05D000270 1.6e-06 55.8 71 52.1
AT5G58830 Arabidopsis thaliana HOM05D000015 ORTHO05D000270 2.0e-06 55.5 66 45.5
BcaC03g15853 Brassica carinata HOM05D000015 ORTHO05D000270 2.0e-06 55.5 66 45.5
Thhalv10012780m.g Eutrema salsugineum HOM05D000015 ORTHO05D000270 2.0e-06 55.5 70 48.6
AL285U10010 Arabidopsis lyrata HOM05D000015 ORTHO05D000270 2.7e-06 55.1 66 47.0
AL8G35130 Arabidopsis lyrata HOM05D000015 ORTHO05D000270 2.7e-06 55.1 66 47.0
Sp6g20870 Schrenkiella parvula HOM05D000015 ORTHO05D000270 3.5e-06 54.7 70 50.0
Carub.0008s1947 Capsella rubella HOM05D000015 ORTHO05D000270 4.6e-06 54.3 66 42.4
THA.LOC104799726 Tarenaya hassleriana HOM05D000015 ORTHO05D000270 4.6e-06 54.3 73 42.5
AT5G59090 Arabidopsis thaliana HOM05D000015 ORTHO05D000270 6.0e-06 53.9 69 49.3
C02p35990 Brassica napus HOM05D000015 ORTHO05D000270 6.0e-06 53.9 66 43.9
BolC2t09615H Brassica oleracea HOM05D000015 ORTHO05D000270 6.0e-06 53.9 66 43.9
Thhalv10012872m.g Eutrema salsugineum HOM05D000015 ORTHO05D000270 6.0e-06 53.9 61 41.0
Carub.0008s1985 Capsella rubella HOM05D000015 ORTHO05D000270 7.8e-06 53.5 70 48.6
Prupe.2G033100 Prunus persica HOM05D000015 ORTHO05D000270 7.8e-06 53.5 73 43.8


User provided reference genes

Program Settings