Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04446 Brassica carinata HOM05D000051 ORTHO05D000015 9.7e-74 280.0 139 100.0
A03p12960 Brassica napus HOM05D000051 ORTHO05D000015 3.0e-22 109.0 103 62.1
BraA03t10604Z Brassica rapa HOM05D000051 ORTHO05D000015 3.0e-22 109.0 103 62.1
Carub.0008s1665 Capsella rubella HOM05D000051 ORTHO05D000015 1.3e-17 93.6 102 52.9
Carub.0008s1666 Capsella rubella HOM05D000051 ORTHO05D000015 1.3e-17 93.6 100 53.0
Thhalv10015747m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.7e-17 93.2 101 54.5
AT5G50270 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 6.4e-17 91.3 104 50.0
AT1G32375 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.2e-16 88.6 103 47.6
CARHR269740 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.3e-16 87.4 102 52.9
AL8G32120 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.5e-15 85.5 100 52.0
CARHR269900 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.5e-15 85.5 102 50.0
BolC3t14007H Brassica oleracea HOM05D000051 ORTHO05D000015 7.8e-15 84.3 94 51.1
A03p13460 Brassica napus HOM05D000051 ORTHO05D000015 1.7e-14 83.2 96 51.0
Thhalv10028119m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.3e-14 82.8 105 47.6
A04p11540 Brassica napus HOM05D000051 ORTHO05D000015 3.9e-14 82.0 102 49.0
BcaC01g06424 Brassica carinata HOM05D000051 ORTHO05D000015 5.1e-14 81.6 94 50.0
BolC3t14016H Brassica oleracea HOM05D000051 ORTHO05D000015 5.1e-14 81.6 96 51.0
C03p15850 Brassica napus HOM05D000051 ORTHO05D000015 6.6e-14 81.3 96 51.0
Thhalv10013717m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.6e-14 81.3 109 46.8
C03p15830 Brassica napus HOM05D000051 ORTHO05D000038 1.1e-13 80.5 102 50.0
Carub.0001s3076 Capsella rubella HOM05D000051 ORTHO05D000015 1.5e-13 80.1 105 43.8
CARHR269730 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.5e-13 80.1 92 51.1
BcaB01g04399 Brassica carinata HOM05D000051 ORTHO05D000015 1.9e-13 79.7 100 50.0
Carub.0001s3275 Capsella rubella HOM05D000051 ORTHO05D000015 1.9e-13 79.7 105 46.7
AT5G56390 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.3e-13 78.6 104 45.2
Thhalv10028200m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.3e-13 78.6 103 45.6
C03p15840 Brassica napus HOM05D000051 ORTHO05D000015 7.3e-13 77.8 104 47.1
BolC3t14015H Brassica oleracea HOM05D000051 ORTHO05D000015 7.3e-13 77.8 104 47.1
Thhalv10013763m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.3e-13 77.8 90 48.9
CARHR269920 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.3e-12 77.0 104 45.2
Carub.0008s1682 Capsella rubella HOM05D000051 ORTHO05D000015 1.6e-12 76.6 101 46.5
A03p13550 Brassica napus HOM05D000051 ORTHO05D000015 4.8e-12 75.1 100 45.0
BraA03t10659Z Brassica rapa HOM05D000051 ORTHO05D000038 4.8e-12 75.1 103 47.6
BraA03t10660Z Brassica rapa HOM05D000051 ORTHO05D000015 4.8e-12 75.1 100 45.0
A03p13540 Brassica napus HOM05D000051 ORTHO05D000038 6.2e-12 74.7 102 47.1
BraA02t05983Z Brassica rapa HOM05D000051 ORTHO05D000015 1.1e-11 73.9 116 43.1
C02p15320 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-11 73.2 66 60.6
BolC2t07648H Brassica oleracea HOM05D000051 ORTHO05D000015 1.8e-11 73.2 66 60.6
Thhalv10015489m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.1e-11 72.4 100 48.0
Thhalv10015962m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.0e-11 72.0 96 45.8
BraA10t43468Z Brassica rapa HOM05D000051 ORTHO05D000015 6.9e-11 71.2 96 44.8
Thhalv10015273m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.9e-11 71.2 91 51.6
C09p47830 Brassica napus HOM05D000051 ORTHO05D000015 9.0e-11 70.9 100 42.0
BolC9t57621H Brassica oleracea HOM05D000051 ORTHO05D000015 9.0e-11 70.9 100 42.0
Carub.0008s1681 Capsella rubella HOM05D000051 ORTHO05D000015 1.2e-10 70.5 99 48.5
Carub.0001s3443 Capsella rubella HOM05D000051 ORTHO05D000015 1.5e-10 70.1 103 47.6
Sp6g18220 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.5e-10 70.1 67 61.2
Carub.0008s1683 Capsella rubella HOM05D000051 ORTHO05D000015 2.0e-10 69.7 94 47.9
Carub.0008s1667 Capsella rubella HOM05D000051 ORTHO05D000015 2.6e-10 69.3 100 43.0
Carub.0008s1684 Capsella rubella HOM05D000051 ORTHO05D000015 2.6e-10 69.3 126 38.1
BcaB01g02570 Brassica carinata HOM05D000051 ORTHO05D000015 3.4e-10 68.9 95 45.3
CARHR031760 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.4e-10 68.9 105 38.1
BcaC04g20097 Brassica carinata HOM05D000051 ORTHO05D000015 9.9e-10 67.4 63 54.0
BolC9t57625H Brassica oleracea HOM05D000051 ORTHO05D000015 9.9e-10 67.4 63 54.0
CARHR129080 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.9e-10 67.4 52 63.5
C09p47870 Brassica napus HOM05D000051 ORTHO05D000015 2.2e-09 66.2 88 45.5
CARHR031780 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.9e-09 65.1 100 41.0
A03p13450 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-08 63.9 85 42.4
BraA03t10652Z Brassica rapa HOM05D000051 ORTHO05D000015 1.1e-08 63.9 85 42.4
C03p15750 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-08 63.5 62 51.6
Carub.0008s1680 Capsella rubella HOM05D000051 ORTHO05D000015 1.4e-08 63.5 95 47.4
CARHR269760 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.4e-08 63.5 124 41.1
Thhalv10015652m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.4e-08 63.5 91 42.9
Sp6g18210 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.4e-08 63.5 98 46.9
CARHR033430 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.4e-08 62.8 59 55.9
A02p09100 Brassica napus HOM05D000051 ORTHO05D000015 3.2e-08 62.4 65 50.8
BraA02t05978Z Brassica rapa HOM05D000051 ORTHO05D000015 3.2e-08 62.4 65 50.8
BcaB01g02571 Brassica carinata HOM05D000051 ORTHO05D000015 4.2e-08 62.0 96 43.8
Sp1g29700 Schrenkiella parvula HOM05D000051 ORTHO05D000015 2.7e-07 59.3 119 37.8
Sp7g03250 Schrenkiella parvula HOM05D030251 ORTHO05D012528 6.0e-07 58.2 53 60.4
CARHR139730 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.9e-07 57.8 63 49.2
Carub.0008s1685 Capsella rubella HOM05D000051 ORTHO05D000015 1.0e-06 57.4 60 51.7
A02p09160 Brassica napus HOM05D000051 ORTHO05D000015 1.3e-06 57.0 65 46.2
C02p15290 Brassica napus HOM05D000051 ORTHO05D000015 1.3e-06 57.0 66 50.0
BolC2t07646H Brassica oleracea HOM05D000051 ORTHO05D000015 1.3e-06 57.0 66 50.0
BraA02t05982Z Brassica rapa HOM05D000051 ORTHO05D000015 1.3e-06 57.0 65 46.2
BraA02t05981Z Brassica rapa HOM05D000051 ORTHO05D000015 1.7e-06 56.6 66 51.5
C02p15230 Brassica napus HOM05D000051 ORTHO05D000015 2.3e-06 56.2 65 46.2
BolC2t07647H Brassica oleracea HOM05D000051 ORTHO05D000015 2.3e-06 56.2 64 48.4
CARHR270550 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.9e-06 55.5 63 42.9
Carub.0008s1675 Capsella rubella HOM05D000051 ORTHO05D000015 5.1e-06 55.1 66 48.5
Carub.0008s1677 Capsella rubella HOM05D000051 ORTHO05D000015 5.1e-06 55.1 66 50.0
A02p09150 Brassica napus HOM05D000051 ORTHO05D000015 6.6e-06 54.7 66 50.0
BolC9t55155H Brassica oleracea HOM05D000051 ORTHO05D000015 6.6e-06 54.7 110 39.1
AL9U10090 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 8.7e-06 54.3 122 38.5


User provided reference genes

Program Settings