Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 1.6e-248 862.4 479 100.0
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 3.2e-217 758.4 480 89.2
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 2.5e-209 732.3 480 87.3
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 9.4e-209 730.3 480 87.3
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 5.0e-202 708.0 501 81.8
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 2.3e-183 646.0 506 75.3
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 1.9e-161 573.2 490 71.8
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 5.8e-158 561.6 553 64.2
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 5.1e-154 548.5 536 64.6
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.4e-140 503.8 449 69.3
Aa31LG3G12750 Aethionema arabicum HOM05D006771 ORTHO05D008296 6.3e-88 328.9 394 57.4
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 1.7e-32 144.8 512 29.9
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 5.1e-29 133.3 589 29.4
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 2.8e-27 127.5 503 30.2
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.2e-26 123.2 589 27.3
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 5.2e-26 123.2 541 28.8
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.2e-25 122.1 590 27.3
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.2e-25 122.1 593 27.3
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 1.5e-25 121.7 294 34.7
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 3.4e-25 120.6 611 27.5
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.3e-24 118.6 539 27.6
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.7e-24 118.2 573 27.6
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 2.2e-24 117.9 548 27.9
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 7.1e-23 112.8 621 27.1
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 7.1e-23 112.8 249 36.5
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 9.3e-23 112.5 574 26.7
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 7.8e-22 109.4 415 30.1
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 7.8e-22 109.4 605 24.8
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 1.0e-21 109.0 355 32.1
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 1.0e-21 109.0 161 45.3
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 1.7e-21 108.2 495 27.7
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.7e-21 108.2 124 49.2
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 2.3e-21 107.8 201 37.3
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 3.0e-21 107.5 274 35.0
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 3.0e-21 107.5 494 27.5
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.9e-21 107.1 298 31.9
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 5.1e-21 106.7 550 27.1
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 5.1e-21 106.7 216 34.7
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 6.6e-21 106.3 142 43.0
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 6.6e-21 106.3 502 28.3
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 8.7e-21 105.9 296 31.1
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.5e-20 105.1 626 25.7
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 1.9e-20 104.8 298 32.2
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 1.9e-20 104.8 487 27.9
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 1.9e-20 104.8 538 27.9
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.3e-19 102.1 509 28.5
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.6e-19 101.7 611 25.7
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 2.1e-19 101.3 369 31.2
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 2.1e-19 101.3 595 27.6
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 2.8e-19 100.9 552 26.3
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 3.6e-19 100.5 393 29.0
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.6e-19 100.5 221 33.9
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 8.1e-19 99.4 286 30.8
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 5.3e-18 96.7 239 31.8
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 5.3e-18 96.7 550 26.2
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 6.9e-18 96.3 462 26.0
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 6.9e-18 96.3 367 30.5
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.2e-17 95.5 411 28.0
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 1.5e-17 95.1 241 32.0
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.5e-17 95.1 346 30.3
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 2.0e-17 94.7 241 34.4
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 5.8e-17 93.2 508 26.0
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 5.8e-17 93.2 121 49.6
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 7.6e-17 92.8 126 42.9
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 8.4e-16 89.4 213 31.5
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.4e-15 88.6 568 28.7
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.9e-15 88.2 576 28.0
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 2.4e-15 87.8 182 35.2
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 2.4e-15 87.8 555 27.7
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 2.4e-15 87.8 557 26.4
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 4.2e-15 87.0 207 31.4
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 4.2e-15 87.0 643 25.2
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 5.4e-15 86.7 461 26.2
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 7.1e-15 86.3 242 33.1
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.5e-14 84.0 258 31.8
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 6.0e-14 83.2 636 24.4
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 6.0e-14 83.2 566 27.4
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 1.0e-13 82.4 569 25.5
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.0e-13 82.4 518 25.3
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 5.1e-13 80.1 473 26.0
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 5.1e-13 80.1 514 24.9
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 8.7e-13 79.3 303 29.0
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.1e-12 79.0 319 28.2
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 1.5e-12 78.6 76 48.7
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 5.6e-12 76.6 302 29.5
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.4e-12 76.3 598 25.9
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 1.6e-11 75.1 345 26.4
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 2.1e-11 74.7 433 24.7
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 4.8e-11 73.6 125 34.4
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 3.1e-10 70.9 301 27.2
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.3e-10 70.1 552 26.3
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 9.0e-10 69.3 139 33.8
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 9.0e-10 69.3 124 32.3
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 9.9e-09 65.9 509 25.1
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 2.9e-08 64.3 469 22.8
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 8.4e-08 62.8 331 23.3
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 1.9e-07 61.6 127 29.1
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.9e-07 61.6 216 28.7
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.9e-07 61.6 216 28.7
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 7.1e-07 59.7 342 28.7
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 1.6e-06 58.5 52 51.9


User provided reference genes

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