Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04319 Brassica carinata HOM05D008316 ORTHO05D005130 5.8e-173 611.3 438 100.0
BcaB05g25144 Brassica carinata HOM05D008316 ORTHO05D005130 7.3e-75 285.4 362 80.7
BcaC09g49342 Brassica carinata HOM05D008316 ORTHO05D005130 1.5e-64 251.1 362 77.3
BcaB07g32291 Brassica carinata HOM05D008316 ORTHO05D014956 2.4e-54 217.2 468 43.8
BcaC07g37291 Brassica carinata HOM05D008316 ORTHO05D005130 4.5e-48 196.4 380 41.6
BcaC02g09635 Brassica carinata HOM05D008316 ORTHO05D005130 2.1e-37 161.0 295 41.7
BcaC08g44739 Brassica carinata HOM05D008316 ORTHO05D005130 3.7e-34 150.2 286 46.2
BcaC06g34855 Brassica carinata HOM05D008316 ORTHO05D005130 1.2e-32 145.2 286 44.4
C04p52530 Brassica napus HOM05D008316 ORTHO05D005130 2.2e-31 141.0 137 56.9
C07p22550 Brassica napus HOM05D008316 ORTHO05D005130 6.5e-31 139.4 137 56.9
C08p07230 Brassica napus HOM05D008316 ORTHO05D005130 3.2e-30 137.1 141 55.3
BcaB04g17553 Brassica carinata HOM05D008316 ORTHO05D014956 3.5e-29 133.7 281 39.5
BolC5t32273H Brassica oleracea HOM05D003554 ORTHO05D005130 8.5e-23 112.5 203 38.4
C06p00220 Brassica napus HOM05D003554 ORTHO05D005130 9.4e-22 109.0 203 37.9
BraA07t28446Z Brassica rapa HOM05D003554 ORTHO05D005130 9.4e-22 109.0 203 37.9
BcaB02g06748 Brassica carinata HOM05D008316 ORTHO05D005130 1.6e-21 108.2 159 42.8
A07p06510 Brassica napus HOM05D003554 ORTHO05D005130 1.4e-20 105.1 200 37.5
BcaC04g20935 Brassica carinata HOM05D008316 ORTHO05D005130 1.8e-20 104.8 144 45.1
BolC9t56608H Brassica oleracea HOM05D008316 ORTHO05D005130 1.5e-19 101.7 123 48.0
BraA09t38863Z Brassica rapa HOM05D008316 ORTHO05D005130 1.5e-19 101.7 125 49.6
BcaB05g23532 Brassica carinata HOM05D008316 ORTHO05D005130 1.3e-15 88.6 132 40.2
BcaB05g21986 Brassica carinata HOM05D008316 ORTHO05D005130 6.5e-15 86.3 126 40.5
BcaB06g28040 Brassica carinata HOM05D008316 ORTHO05D005130 6.5e-15 86.3 126 40.5
BcaB02g09229 Brassica carinata HOM05D035459 ORTHO05D093939 3.9e-12 77.0 45 82.2
C03p67190 Brassica napus HOM05D003554 ORTHO05D005130 1.1e-11 75.5 138 39.1
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 2.6e-11 74.3 152 33.6
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 3.7e-10 70.5 76 47.4
Carub.0003s3367 Capsella rubella HOM05D003554 ORTHO05D005130 1.1e-09 68.9 162 32.1
C02p31360 Brassica napus HOM05D009532 ORTHO05D005130 1.4e-09 68.6 76 47.4
Carub.0001s3566 Capsella rubella HOM05D003554 ORTHO05D005130 1.4e-09 68.6 162 32.7
Carub.0002s0983 Capsella rubella HOM05D003554 ORTHO05D005130 9.1e-09 65.9 141 31.2
Carub.0002s0984 Capsella rubella HOM05D003554 ORTHO05D005130 9.1e-09 65.9 141 31.2
Carub.0007s0014 Capsella rubella HOM05D003554 ORTHO05D005130 9.1e-09 65.9 162 31.5
Carub.0006s2609 Capsella rubella HOM05D003554 ORTHO05D005130 1.2e-08 65.5 162 31.5
Carub.0278s0001 Capsella rubella HOM05D003554 ORTHO05D005130 1.2e-08 65.5 162 30.9
Aa31LG11G8070 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.6e-08 65.1 125 32.0
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 2.0e-08 64.7 168 32.7
Aa31LG7G10740 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.5e-08 63.9 175 30.3
Aa31sc538G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 4.5e-08 63.5 139 33.8
Carub.0002s0995 Capsella rubella HOM05D003554 ORTHO05D005130 4.5e-08 63.5 174 29.9
BcaC09g49872 Brassica carinata HOM05D008825 ORTHO05D015484 7.7e-08 62.8 135 60.7
THA.LOC109117170 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.0e-07 62.4 144 33.3
Aa31LG10G9040 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.2e-07 61.2 122 32.8
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 3.8e-07 60.5 103 36.9
BcaB02g10458 Brassica carinata HOM05D008316 ORTHO05D018718 1.1e-06 58.9 56 66.1
Aa31LG6G9970 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.9e-06 58.2 128 30.5
BolC3t20187H Brassica oleracea HOM05D017905 ORTHO05D018718 4.2e-06 57.0 132 65.2
Aa31sc111G40 Aethionema arabicum HOM05D003554 ORTHO05D005130 5.5e-06 56.6 110 32.7
BNapus_Darmor_BZH_scaffold_167p00060 Brassica napus HOM05D003554 ORTHO05D005130 5.5e-06 56.6 179 27.9


User provided reference genes

Program Settings