Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04304 Brassica carinata HOM05D000480 ORTHO05D000313 1.9e-119 432.6 227 100.0
BcaB01g04305 Brassica carinata HOM05D000480 ORTHO05D000313 5.8e-84 314.7 227 75.8
C03p16980 Brassica napus HOM05D000480 ORTHO05D000313 3.3e-79 298.9 227 72.2
BcaC01g06315 Brassica carinata HOM05D000480 ORTHO05D000313 1.1e-77 293.9 227 71.4
BolC3t14110H Brassica oleracea HOM05D000480 ORTHO05D000313 3.8e-75 285.4 238 67.6
A03p14530 Brassica napus HOM05D000480 ORTHO05D000313 4.8e-70 268.5 239 64.0
Thhalv10013813m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 5.5e-66 255.0 230 63.5
Sp6g16580 Schrenkiella parvula HOM05D000480 ORTHO05D000313 7.1e-66 254.6 227 63.0
Thhalv10013583m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 3.0e-64 249.2 230 60.4
CARHR267920 Cardamine hirsuta HOM05D000480 ORTHO05D000313 1.5e-60 236.9 228 57.5
AT5G54620 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 3.2e-58 229.2 231 56.3
CARHR267930 Cardamine hirsuta HOM05D000480 ORTHO05D000313 1.6e-57 226.9 227 54.2
AL8G30070 Arabidopsis lyrata HOM05D000480 ORTHO05D000313 2.7e-57 226.1 220 56.4
BraA06t26905Z Brassica rapa HOM05D000480 ORTHO05D000313 3.6e-57 225.7 219 58.0
A10p11890 Brassica napus HOM05D000480 ORTHO05D000313 1.8e-53 213.4 230 52.6
BraA10t43286Z Brassica rapa HOM05D000480 ORTHO05D000313 1.8e-53 213.4 230 52.6
C09p44960 Brassica napus HOM05D000480 ORTHO05D000313 1.2e-52 210.7 230 52.2
BcaC04g20322 Brassica carinata HOM05D000480 ORTHO05D000313 1.5e-52 210.3 230 52.2
BolC9t57374H Brassica oleracea HOM05D000480 ORTHO05D000313 1.5e-52 210.3 230 52.2
CARHR267900 Cardamine hirsuta HOM05D000480 ORTHO05D000313 5.7e-47 191.8 172 61.6
AT5G54610 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 6.3e-46 188.3 227 48.5
BcaB08g35822 Brassica carinata HOM05D000480 ORTHO05D000313 6.5e-43 178.3 179 54.2
Carub.0006s3173 Capsella rubella HOM05D000480 ORTHO05D000313 2.1e-41 173.3 227 41.9
Carub.0008s1488 Capsella rubella HOM05D000480 ORTHO05D000313 1.3e-38 164.1 219 45.7
THA.LOC104815248 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 6.5e-35 151.8 228 39.5
SpUn1067_0010 Schrenkiella parvula HOM05D000480 ORTHO05D000313 1.7e-30 137.1 99 71.7
BcaB01g04303 Brassica carinata HOM05D000480 ORTHO05D000313 1.8e-29 133.7 72 100.0
THA.LOC104813058 Tarenaya hassleriana HOM05D000480 ORTHO05D000313 2.0e-28 130.2 228 37.7
AL6G44770 Arabidopsis lyrata HOM05D000480 ORTHO05D000313 1.3e-27 127.5 235 38.3
CARHR255880 Cardamine hirsuta HOM05D000480 ORTHO05D000313 1.1e-26 124.4 236 36.0
Carub.0006s2949 Capsella rubella HOM05D000480 ORTHO05D000313 5.5e-26 122.1 234 37.2
BcaC04g21204 Brassica carinata HOM05D000480 ORTHO05D000313 1.2e-25 120.9 234 37.2
C09p34350 Brassica napus HOM05D000480 ORTHO05D000313 1.2e-25 120.9 234 37.2
BolC9t56278H Brassica oleracea HOM05D000480 ORTHO05D000313 1.2e-25 120.9 234 37.2
BcaB01g01508 Brassica carinata HOM05D000480 ORTHO05D000313 3.0e-24 116.3 235 35.3
Carub.0006s3131 Capsella rubella HOM05D000480 ORTHO05D000313 4.9e-22 109.0 239 33.1
AT4G10720 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 3.5e-20 102.8 232 33.6
Aa31LG9G11340 Aethionema arabicum HOM05D000480 ORTHO05D000313 5.6e-18 95.5 235 31.1
Aa31LG9G11380 Aethionema arabicum HOM05D000480 ORTHO05D000313 1.2e-17 94.4 235 32.8
BcaB05g22692 Brassica carinata HOM05D000480 ORTHO05D000313 1.8e-16 90.5 235 30.2
BcaC04g21065 Brassica carinata HOM05D000480 ORTHO05D000313 1.8e-16 90.5 233 31.3
BcaC04g21067 Brassica carinata HOM05D000480 ORTHO05D000313 1.8e-16 90.5 233 31.3
C09p36070 Brassica napus HOM05D000480 ORTHO05D000313 1.8e-16 90.5 233 31.3
BolC9t56446H Brassica oleracea HOM05D000480 ORTHO05D000313 1.8e-16 90.5 233 31.3
AT5G15500 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 6.8e-16 88.6 174 34.5
Sp6g28600 Schrenkiella parvula HOM05D000480 ORTHO05D000313 6.8e-16 88.6 234 27.8
Thhalv10013476m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 1.2e-15 87.8 173 35.8
AL6G26350 Arabidopsis lyrata HOM05D000480 ORTHO05D000313 5.7e-15 85.5 236 27.1
BcaC05g24424 Brassica carinata HOM05D000480 ORTHO05D000313 9.8e-15 84.7 213 30.5
BcaC05g24430 Brassica carinata HOM05D000480 ORTHO05D000313 9.8e-15 84.7 213 30.5
A09p28510 Brassica napus HOM05D000480 ORTHO05D000313 9.8e-15 84.7 236 29.2
BolC5t29113H Brassica oleracea HOM05D000480 ORTHO05D000313 9.8e-15 84.7 213 30.5
C08p45690 Brassica napus HOM05D000480 ORTHO05D000313 3.7e-14 82.8 198 34.3
Thhalv10029378m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 8.3e-14 81.6 156 36.5
AT1G14500 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 2.4e-13 80.1 201 33.3
BolC3t13315H Brassica oleracea HOM05D000480 ORTHO05D000313 3.2e-13 79.7 183 33.9
BolC5t29983H Brassica oleracea HOM05D000480 ORTHO05D000313 3.2e-13 79.7 223 34.5
BraA06t24233Z Brassica rapa HOM05D000480 ORTHO05D000313 3.2e-13 79.7 208 33.7
C03p08180 Brassica napus HOM05D000480 ORTHO05D000313 5.4e-13 79.0 183 33.3
CARHR197810 Cardamine hirsuta HOM05D000480 ORTHO05D000313 5.4e-13 79.0 234 28.2
BcaB08g34401 Brassica carinata HOM05D000480 ORTHO05D000313 1.2e-12 77.8 208 31.7
AT1G14480 Arabidopsis thaliana HOM05D000480 ORTHO05D000313 1.6e-12 77.4 224 32.6
BcaB01g05047 Brassica carinata HOM05D000480 ORTHO05D000313 1.6e-12 77.4 196 31.1
A09p62090 Brassica napus HOM05D000480 ORTHO05D000313 1.6e-12 77.4 199 32.2
BraA09t41574Z Brassica rapa HOM05D000480 ORTHO05D000313 1.6e-12 77.4 221 30.3
BolC8t52123H Brassica oleracea HOM05D000480 ORTHO05D000313 2.0e-12 77.0 198 33.3
Sp1g12850 Schrenkiella parvula HOM05D000480 ORTHO05D000313 2.0e-12 77.0 206 33.5
BolC5t29986H Brassica oleracea HOM05D000480 ORTHO05D000313 5.9e-12 75.5 209 33.0
Carub.0001s1422 Capsella rubella HOM05D000480 ORTHO05D000313 2.3e-11 73.6 199 31.7
BcaC05g25356 Brassica carinata HOM05D000480 ORTHO05D000313 6.6e-11 72.0 216 32.9
BcaB02g06501 Brassica carinata HOM05D000480 ORTHO05D000313 1.5e-10 70.9 153 35.3
BolC5t29984H Brassica oleracea HOM05D000480 ORTHO05D000313 1.5e-10 70.9 210 32.9
A06p10530 Brassica napus HOM05D000480 ORTHO05D000313 1.9e-10 70.5 164 32.9
C09p44310 Brassica napus HOM05D000480 ORTHO05D000313 3.3e-10 69.7 207 30.4
BcaC05g25355 Brassica carinata HOM05D000480 ORTHO05D000313 4.3e-10 69.3 171 33.3
A06p10520 Brassica napus HOM05D000480 ORTHO05D000313 4.3e-10 69.3 221 31.7
C05p12390 Brassica napus HOM05D000480 ORTHO05D000313 4.3e-10 69.3 171 33.3
Thhalv10009831m.g Eutrema salsugineum HOM05D000480 ORTHO05D000313 5.6e-10 68.9 160 33.8
Aa31LG1G570 Aethionema arabicum HOM05D000480 ORTHO05D000313 7.3e-10 68.6 225 28.4
BcaC07g41568 Brassica carinata HOM05D000480 ORTHO05D000313 7.3e-10 68.6 142 35.9
C05p12350 Brassica napus HOM05D000480 ORTHO05D000313 2.1e-09 67.0 222 31.5
BcaB02g06502 Brassica carinata HOM05D000480 ORTHO05D000313 1.0e-08 64.7 145 34.5
Duzib114G0019 Durio zibethinus HOM05D000480 ORTHO05D000313 4.0e-08 62.8 200 30.0
Duzib151G0332 Durio zibethinus HOM05D000480 ORTHO05D000313 6.8e-08 62.0 100 36.0
Thecc.10G053900 Theobroma cacao HOM05D000480 ORTHO05D034848 8.9e-08 61.6 160 30.0
BcaB08g34400 Brassica carinata HOM05D000480 ORTHO05D000313 2.0e-07 60.5 201 29.4
Hma1.2p1_2411F.1_g321610 Hydrangea macrophylla HOM05D000480 ORTHO05D000313 2.2e-06 57.0 211 29.9
Thecc.10G054900 Theobroma cacao HOM05D000480 ORTHO05D000313 2.2e-06 57.0 229 30.1
Hma1.2p1_1439F.1_g283450 Hydrangea macrophylla HOM05D000480 ORTHO05D000313 6.4e-06 55.5 168 30.4
BcaC05g25352 Brassica carinata HOM05D000480 ORTHO05D000313 8.3e-06 55.1 117 36.8
Thecc.10G054300 Theobroma cacao HOM05D000480 ORTHO05D000313 8.3e-06 55.1 100 32.0


User provided reference genes

Program Settings