Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04266 Brassica carinata HOM05D006142 ORTHO05D010451 1.5e-32 142.1 68 100.0
A06p29340 Brassica napus HOM05D006142 ORTHO05D010451 4.7e-21 104.0 65 72.3
C05p60180 Brassica napus HOM05D006142 ORTHO05D010451 1.8e-20 102.1 65 70.8
C01p40720 Brassica napus HOM05D006142 ORTHO05D010451 3.0e-20 101.3 65 73.8
BcaC09g49266 Brassica carinata HOM05D006142 ORTHO05D010451 2.7e-16 88.2 58 72.4
BraA09t38560Z Brassica rapa HOM05D006142 ORTHO05D010451 6.1e-13 77.0 65 52.3
BraA02t09249Z Brassica rapa HOM05D006142 ORTHO05D023852 1.8e-12 75.5 65 46.2
A02p27060 Brassica napus HOM05D006142 ORTHO05D010451 6.8e-12 73.6 65 47.7
BraA02t07725Z Brassica rapa HOM05D006142 ORTHO05D010451 6.8e-12 73.6 65 47.7
C03p78180 Brassica napus HOM05D006142 ORTHO05D016090 8.8e-12 73.2 66 47.0
BolC3t20080H Brassica oleracea HOM05D000005 ORTHO05D000449 2.0e-11 72.0 66 45.5
BolC4t22346H Brassica oleracea HOM05D006142 ORTHO05D023852 2.0e-11 72.0 65 47.7
BcaB06g25861 Brassica carinata HOM05D006142 ORTHO05D023852 5.7e-11 70.5 65 47.7
BcaB01g01313 Brassica carinata HOM05D006142 ORTHO05D010451 9.8e-11 69.7 65 43.1
BcaB05g22796 Brassica carinata HOM05D006142 ORTHO05D010451 1.3e-10 69.3 65 44.6
C04p19380 Brassica napus HOM05D006142 ORTHO05D024119 6.3e-10 67.0 41 68.3
BolC4t23470H Brassica oleracea HOM05D006142 ORTHO05D024119 6.3e-10 67.0 41 68.3
C09p61280 Brassica napus HOM05D006142 ORTHO05D010451 1.2e-08 62.8 60 48.3
C08p03660 Brassica napus HOM05D006142 ORTHO05D010451 3.5e-08 61.2 60 43.3
Sp2g05510 Schrenkiella parvula HOM05D006142 ORTHO05D010451 5.5e-06 53.9 62 40.3


User provided reference genes

Program Settings