Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04122 Brassica carinata HOM05D004740 ORTHO05D005991 1.0e-180 636.7 344 100.0
BolC3t14364H Brassica oleracea HOM05D004740 ORTHO05D005991 2.3e-164 582.4 368 88.6
Sp4g12790 Schrenkiella parvula HOM05D004740 ORTHO05D005991 9.5e-163 577.0 367 88.0
CARHR123500 Cardamine hirsuta HOM05D004740 ORTHO05D005991 3.6e-162 575.1 370 87.8
AT2G30200 Arabidopsis thaliana HOM05D004740 ORTHO05D005991 8.1e-162 573.9 366 87.4
AL4G25030 Arabidopsis lyrata HOM05D004740 ORTHO05D005991 1.8e-161 572.8 369 87.8
BraA04t17832Z Brassica rapa HOM05D004740 ORTHO05D005991 6.8e-161 570.9 364 87.6
Thhalv10016751m.g Eutrema salsugineum HOM05D004740 ORTHO05D005991 1.2e-160 570.1 369 87.8
Carub.0004s1135 Capsella rubella HOM05D004740 ORTHO05D005991 1.3e-159 566.6 369 87.0
BcaB02g10307 Brassica carinata HOM05D004740 ORTHO05D005991 2.9e-159 565.5 367 86.4
BcaB06g28350 Brassica carinata HOM05D004740 ORTHO05D005991 4.9e-159 564.7 364 86.0
C04p59110 Brassica napus HOM05D004740 ORTHO05D005991 1.9e-158 562.8 365 86.6
BolC4t27422H Brassica oleracea HOM05D004740 ORTHO05D005991 1.9e-158 562.8 365 86.6
Aa31LG5G6500 Aethionema arabicum HOM05D004740 ORTHO05D005991 3.5e-157 558.5 377 84.6
BcaC02g08041 Brassica carinata HOM05D004740 ORTHO05D005991 3.5e-157 558.5 365 85.8
BcaC02g11103 Brassica carinata HOM05D004740 ORTHO05D005991 2.3e-156 555.8 367 86.9
C04p20390 Brassica napus HOM05D004740 ORTHO05D005991 2.3e-156 555.8 368 87.2
BolC4t23568H Brassica oleracea HOM05D004740 ORTHO05D005991 2.3e-156 555.8 364 86.8
A05p15240 Brassica napus HOM05D004740 ORTHO05D005991 1.9e-155 552.7 368 86.7
BraA05t20443Z Brassica rapa HOM05D004740 ORTHO05D005991 1.9e-155 552.7 368 86.7
THA.LOC104826277 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 2.1e-149 532.7 366 80.1
BcaC01g06023 Brassica carinata HOM05D004740 ORTHO05D005991 3.3e-147 525.4 368 82.6
arahy.Tifrunner.gnm1.ann1.MX8U3M Arachis hypogaea HOM05D004740 ORTHO05D005991 8.1e-146 520.8 366 80.3
arahy.Tifrunner.gnm1.ann1.FJ253B Arachis hypogaea HOM05D004740 ORTHO05D005991 1.8e-145 519.6 366 79.2
arahy.Tifrunner.gnm1.ann1.T9C115 Arachis hypogaea HOM05D004740 ORTHO05D005991 2.4e-145 519.2 368 78.8
THA.LOC104800771 Tarenaya hassleriana HOM05D004740 ORTHO05D005991 1.2e-144 516.9 365 79.5
QL01p026440 Quercus lobata HOM05D004740 ORTHO05D005991 2.0e-144 516.2 369 78.0
CiPaw.13G069800 Carya illinoinensis HOM05D004740 ORTHO05D005991 2.9e-143 512.3 383 75.2
Haze_24407 Corylus avellana HOM05D004740 ORTHO05D005991 3.8e-143 511.9 378 76.7
CsaV3_1G036540 Cucumis sativus L. HOM05D004740 ORTHO05D005991 3.8e-143 511.9 359 78.6
Lalb_Chr18g0051371 Lupinus albus HOM05D004740 ORTHO05D005991 4.9e-143 511.5 365 77.8
Gohir.A03G025700 Gossypium hirsutum HOM05D004740 ORTHO05D005991 8.4e-143 510.8 368 77.7
Potri.009G077800 Populus trichocarpa HOM05D004740 ORTHO05D005991 1.4e-142 510.0 372 76.6
MELO3C020514.2 Cucumis melo HOM05D004740 ORTHO05D005991 1.9e-142 509.6 359 78.0
Duzib168G1324 Durio zibethinus HOM05D004740 ORTHO05D005991 2.4e-142 509.2 368 77.4
Lj6g0008641 Lotus japonicus HOM05D004740 ORTHO05D005991 2.4e-142 509.2 361 78.4
Gorai.003G150000 Gossypium raimondii HOM05D004740 ORTHO05D005991 3.2e-142 508.8 368 77.4
Sed0001589 Sechium edule HOM05D004740 ORTHO05D005991 3.2e-142 508.8 349 79.4
Glyma.18G057700 Glycine max HOM05D004740 ORTHO05D005991 9.3e-142 507.3 360 78.6
Peaxi162Scf00055g00057 Petunia axillaris HOM05D004740 ORTHO05D005991 9.3e-142 507.3 361 78.1
Gohir.D03G142800 Gossypium hirsutum HOM05D004740 ORTHO05D005991 2.1e-141 506.1 368 77.2
COL.COLO4_11143 Corchorus olitorius HOM05D004740 ORTHO05D005991 2.7e-141 505.8 368 77.7
MD11G1056800 Malus domestica HOM05D004740 ORTHO05D005991 1.0e-140 503.8 371 76.3
Sabra09G0059400 Salix brachista HOM05D004740 ORTHO05D005991 1.0e-140 503.8 372 75.8
Prupe.6G048900 Prunus persica HOM05D004740 ORTHO05D005991 1.7e-140 503.1 370 75.1
Thecc.09G357100 Theobroma cacao HOM05D004740 ORTHO05D005991 1.7e-140 503.1 367 76.8
Nitab4.5_0002737g0070 Nicotiana tabacum HOM05D004740 ORTHO05D005991 2.3e-140 502.7 375 76.0
TAR623G0659 Trochodendron aralioides HOM05D004740 ORTHO05D005991 2.3e-140 502.7 383 73.9
CSS0045632 Camellia sinensis var. sinensis HOM05D004740 ORTHO05D005991 3.0e-140 502.3 383 73.4
CANSAT54G2578 Cannabis sativa HOM05D004740 ORTHO05D005991 3.0e-140 502.3 377 75.3
Psat5g153440 Pisum sativum HOM05D004740 ORTHO05D005991 3.9e-140 501.9 366 76.2
PGR102G2346 Punica granatum HOM05D004740 ORTHO05D005991 8.7e-140 500.7 369 75.1
Solyc01g006980.4 Solanum lycopersicum HOM05D004740 ORTHO05D005991 8.7e-140 500.7 361 76.5
Sopen01g002970 Solanum pennellii HOM05D004740 ORTHO05D005991 1.1e-139 500.4 361 76.2
PGSC0003DMG400021362 Solanum tuberosum HOM05D004740 ORTHO05D005991 1.1e-139 500.4 361 76.7
MD03G1055800 Malus domestica HOM05D004740 ORTHO05D005991 1.5e-139 500.0 371 75.7
Nitab4.5_0001121g0110 Nicotiana tabacum HOM05D004740 ORTHO05D005991 1.9e-139 499.6 375 75.2
Ciclev10028558m.g Citrus clementina HOM05D004740 ORTHO05D005991 2.5e-139 499.2 297 87.2
Manes.18G127700 Manihot esculenta HOM05D004740 ORTHO05D005991 2.5e-139 499.2 372 75.0
FvH4_3g39690 Fragaria vesca HOM05D004740 ORTHO05D005991 3.3e-139 498.8 365 74.0
Glyma.11G164500 Glycine max HOM05D004740 ORTHO05D005991 4.3e-139 498.4 360 76.9
Phvul.006G073300 Phaseolus vulgaris HOM05D004740 ORTHO05D005991 4.3e-139 498.4 364 76.9
TWI75G0989 Tripterygium wilfordii HOM05D004740 ORTHO05D005991 4.3e-139 498.4 365 75.3
Cfa011772 Carpinus fangiana HOM05D004740 ORTHO05D005991 5.6e-139 498.0 360 76.7
TPR.G35611 Trifolium pratense HOM05D004740 ORTHO05D005991 7.3e-139 497.7 297 86.5
Cc01_g14810 Coffea canephora HOM05D004740 ORTHO05D005991 9.6e-139 497.3 297 86.5
Dinv28694 Davidia involucrata HOM05D004740 ORTHO05D005991 1.3e-138 496.9 381 73.5
Medtr3g031380 Medicago truncatula HOM05D004740 ORTHO05D005991 1.3e-138 496.9 364 75.5
Rhsim13G0064700 Rhododendron simsii HOM05D004740 ORTHO05D005991 1.3e-138 496.9 381 74.0
Ca_15002_v3 Cicer arietinum L. HOM05D004740 ORTHO05D005991 1.6e-138 496.5 366 75.7
HanXRQChr01g0012131 Helianthus annuus HOM05D004740 ORTHO05D005991 2.1e-138 496.1 368 75.0
PSO801G0690 Papaver somniferum HOM05D004740 ORTHO05D005991 2.1e-138 496.1 375 74.1
Aqoxy2G00789 Aquilegia oxysepala HOM05D004740 ORTHO05D005991 4.8e-138 495.0 382 72.8
Eucgr.J01859 Eucalyptus grandis HOM05D004740 ORTHO05D005991 6.2e-138 494.6 297 86.2
PSO339G6109 Papaver somniferum HOM05D004740 ORTHO05D005991 6.2e-138 494.6 375 73.9
RcHm_v2.0_Chr5g0071571 Rosa chinensis HOM05D004740 ORTHO05D005991 8.1e-138 494.2 367 73.3
CAN.G911.42 Capsicum annuum HOM05D004740 ORTHO05D005991 2.4e-137 492.7 368 74.2
Lalb_Chr15g0083211 Lupinus albus HOM05D004740 ORTHO05D005991 3.1e-137 492.3 364 75.0
C03p19860 Brassica napus HOM05D004740 ORTHO05D005991 4.0e-137 491.9 319 87.1
vmacro02923 Vaccinium macrocarpon HOM05D004740 ORTHO05D005991 4.0e-137 491.9 380 72.4
Hund29009 Selenicereus undatus HOM05D004740 ORTHO05D005991 5.3e-137 491.5 297 84.8
Hund29013 Selenicereus undatus HOM05D004740 ORTHO05D005991 5.3e-137 491.5 297 84.8
Ah.15g096090 Amaranthus hybridus HOM05D004740 ORTHO05D005991 6.9e-137 491.1 378 73.0
arahy.Tifrunner.gnm1.ann1.C8ZV0S Arachis hypogaea HOM05D004740 ORTHO05D005991 6.9e-137 491.1 376 74.5
CiPaw.14G054500 Carya illinoinensis HOM05D004740 ORTHO05D005991 1.5e-136 490.0 308 81.5
VMungo0540G0639 Vigna mungo HOM05D004740 ORTHO05D005991 1.5e-136 490.0 360 76.9
ATR0594G208 Amborella trichopoda HOM05D004740 ORTHO05D005991 2.6e-136 489.2 297 84.8
Lj2A1092T52 Lonicera japonica HOM05D004740 ORTHO05D005991 5.8e-136 488.0 297 84.2
ClCG03G000380 Citrullus lanatus HOM05D004740 ORTHO05D005991 1.3e-135 486.9 394 69.8
Zm00001eb013760 Zea mays HOM05D004740 ORTHO05D005991 1.3e-135 486.9 297 83.5
DCAR_018228 Daucus carota HOM05D004740 ORTHO05D005991 1.7e-135 486.5 381 71.1
ECA248G3413 Erigeron canadensis HOM05D004740 ORTHO05D005991 2.2e-135 486.1 391 68.8
FAN11G1726 Fragaria x ananassa HOM05D004740 ORTHO05D005991 2.9e-135 485.7 388 69.6
FAN16G0900 Fragaria x ananassa HOM05D004740 ORTHO05D005991 2.9e-135 485.7 388 69.6
Migut.N00764 Erythranthe guttata HOM05D004740 ORTHO05D005991 3.8e-135 485.3 371 74.7
CDE06G2756 Ceratophyllum demersum HOM05D004740 ORTHO05D005991 4.9e-135 485.0 375 71.2
EL10Ac7g15913 Beta vulgaris HOM05D004740 ORTHO05D005991 6.4e-135 484.6 380 72.1
TAR633G1387 Trochodendron aralioides HOM05D004740 ORTHO05D005991 6.4e-135 484.6 297 84.8
MSTRG.17889 Avicennia marina HOM05D004740 ORTHO05D005991 1.4e-134 483.4 297 84.2
Sc12g0002010 Simmondsia chinensis HOM05D004740 ORTHO05D005991 1.4e-134 483.4 381 71.7
SalBow2G1640 Salvia bowleyana HOM05D004740 ORTHO05D005991 2.4e-134 482.6 380 71.6
AUR62001878 Chenopodium quinoa HOM05D004740 ORTHO05D005991 7.1e-134 481.1 297 82.2
FAN21G3316 Fragaria x ananassa HOM05D004740 ORTHO05D005991 7.1e-134 481.1 388 69.3
FAN21G3649 Fragaria x ananassa HOM05D004740 ORTHO05D005991 7.1e-134 481.1 388 69.3
FAN25G0671 Fragaria x ananassa HOM05D004740 ORTHO05D005991 1.2e-133 480.3 388 69.1
Os03g0297400 Oryza sativa ssp. japonica HOM05D004740 ORTHO05D005991 1.2e-133 480.3 367 72.8
SGA_v2.0_scaffold146G36123 Striga asiatica HOM05D004740 ORTHO05D005991 1.2e-133 480.3 377 71.9
A04p22970 Brassica napus HOM05D004740 ORTHO05D005991 1.6e-133 479.9 314 86.3
AUR62009675 Chenopodium quinoa HOM05D004740 ORTHO05D005991 7.9e-133 477.6 297 81.1
HPP92_013770 Vanilla planifolia HOM05D004740 ORTHO05D005991 7.9e-133 477.6 356 73.0
unitig_60.g25555 Utricularia gibba HOM05D004740 ORTHO05D005991 1.0e-132 477.2 297 82.8
Nn2g13251 Nelumbo nucifera HOM05D004740 ORTHO05D005991 5.6e-131 471.5 362 73.8
HanXRQChr01g0012161 Helianthus annuus HOM05D004740 ORTHO05D005991 1.6e-130 469.9 378 70.9
MBI05_g35601_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D005991 3.8e-127 458.8 366 71.6
SEGI_23058 Sequoiadendron giganteum HOM05D004740 ORTHO05D005991 1.1e-126 457.2 357 70.9
Mapoly0009s0078 Marchantia polymorpha HOM05D004740 ORTHO05D005991 1.9e-126 456.4 350 70.3
Pp3c20_19160 Physcomitrium patens HOM05D004740 ORTHO05D005991 4.6e-125 451.8 365 70.1
Lsat_1_v5_gn_5_174621 Lactuca sativa HOM05D004740 ORTHO05D005991 2.3e-124 449.5 407 63.9
AagrBONN_evm.TU.Sc2ySwM_228.2654 Anthoceros agrestis HOM05D004740 ORTHO05D005991 8.2e-122 441.0 298 74.8
Sed0003355 Sechium edule HOM05D004740 ORTHO05D005991 2.4e-121 439.5 277 81.2
SMO200G0259 Selaginella moellendorffii HOM05D004740 ORTHO05D005991 7.6e-120 434.5 298 75.5
Actinidia32613 Actinidia chinensis HOM05D004740 ORTHO05D005991 7.2e-118 427.9 377 66.6
arahy.Tifrunner.gnm1.ann1.R7F6LC Arachis hypogaea HOM05D004740 ORTHO05D005991 8.7e-116 421.0 272 82.7
Cpa.g.sc2.364 Carica papaya HOM05D004740 ORTHO05D005991 1.6e-114 416.8 246 88.2
SHI19203 Sapria himalayana HOM05D004740 ORTHO05D005991 1.5e-112 410.2 344 65.7
Atru.chr3.4126 Acer truncatum HOM05D004740 ORTHO05D005991 3.6e-109 399.1 373 66.2
PRCOL_00005899 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 5.1e-108 395.2 295 69.2
Cre14.g621650 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 3.7e-106 389.0 298 68.8
CBR_g33923 Chara braunii HOM05D004740 ORTHO05D005991 1.3e-98 364.0 303 63.4
Nn2g10995 Nelumbo nucifera HOM05D004740 ORTHO05D005991 2.4e-97 359.8 378 60.8
Potri.001G282600 Populus trichocarpa HOM05D004740 ORTHO05D005991 8.5e-95 351.3 316 65.5
MCO01G413 Micromonas commoda HOM05D004740 ORTHO05D005991 1.1e-91 340.9 352 55.1
GSVIVG01024639001 Vitis vinifera HOM05D004740 ORTHO05D005991 7.5e-91 338.2 198 88.4
A03p16880 Brassica napus HOM05D004740 ORTHO05D005991 5.9e-88 328.6 198 89.4
BraA03t10976Z Brassica rapa HOM05D004740 ORTHO05D005991 5.9e-88 328.6 198 89.4
Oeu005355.3 Olea europaea HOM05D003290 ORTHO05D005991 4.3e-70 269.2 161 85.1
PRCOL_00000466 Prasinoderma coloniale HOM05D004740 ORTHO05D005991 8.0e-61 238.4 287 46.0
Actinidia23202 Actinidia chinensis HOM05D004740 ORTHO05D005991 1.3e-55 221.1 354 46.3
MCO04G051 Micromonas commoda HOM05D004740 ORTHO05D005991 3.0e-55 219.9 286 44.1
Actinidia02620 Actinidia chinensis HOM05D004740 ORTHO05D005991 3.3e-54 216.5 154 75.3
Cre02.g088250 Chlamydomonas reinhardtii HOM05D004740 ORTHO05D005991 3.7e-50 203.0 321 41.1
Nitab4.5_0006359g0020 Nicotiana tabacum HOM05D004740 ORTHO05D005991 1.2e-48 198.0 178 62.4
GSVIVG01024638001 Vitis vinifera HOM05D004740 ORTHO05D005991 1.0e-39 168.3 99 83.8
Nitab4.5_0000644g0120 Nicotiana tabacum HOM05D004740 ORTHO05D005991 9.6e-38 161.8 149 60.4
Nitab4.5_0006126g0030 Nicotiana tabacum HOM05D004740 ORTHO05D005991 2.8e-37 160.2 213 48.8
COL.COLO4_24546 Corchorus olitorius HOM05D004740 ORTHO05D008255 2.0e-35 154.1 161 60.9
Zm00001eb396720 Zea mays HOM05D004740 ORTHO05D444996 1.1e-30 138.3 80 87.5
MBI10_g37352_MAGBIO Magnolia biondii HOM05D004740 ORTHO05D241996 1.9e-17 94.4 75 68.0
Oeu025052.1 Olea europaea HOM05D004740 ORTHO05D005991 1.8e-15 87.8 126 50.0
Nitab4.5_0000644g0100 Nicotiana tabacum HOM05D004740 ORTHO05D284956 1.1e-14 85.1 48 89.6
HPP92_012003 Vanilla planifolia HOM05D004740 ORTHO05D429499 2.8e-13 80.5 90 51.1
VMungo0331G0938 Vigna mungo HOM05D000577 ORTHO05D001093 8.1e-13 79.0 62 67.7
HPP92_013838 Vanilla planifolia HOM05D004740 ORTHO05D005991 6.9e-12 75.9 108 46.3
Carub.0004s1136 Capsella rubella HOM05D004740 ORTHO05D005991 1.2e-11 75.1 42 83.3
MBI15_g35007_MAGBIO Magnolia biondii HOM05D000363 ORTHO05D017376 1.2e-08 65.1 43 74.4


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