Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04106 Brassica carinata HOM05D004600 ORTHO05D005471 6.8e-54 213.8 111 100.0
A05p15020 Brassica napus HOM05D004600 ORTHO05D005471 7.3e-48 193.7 111 91.0
BolC4t23549H Brassica oleracea HOM05D004600 ORTHO05D005471 7.3e-48 193.7 111 91.0
BraA05t20428Z Brassica rapa HOM05D004600 ORTHO05D005471 7.3e-48 193.7 111 91.0
C04p20100 Brassica napus HOM05D004600 ORTHO05D005471 1.6e-47 192.6 111 90.1
SpUn0968_0010 Schrenkiella parvula HOM05D004600 ORTHO05D005471 1.6e-47 192.6 115 90.4
BcaC02g11135 Brassica carinata HOM05D004600 ORTHO05D005471 3.6e-47 191.4 111 90.1
BcaB02g10324 Brassica carinata HOM05D004600 ORTHO05D005471 1.4e-46 189.5 111 90.1
AT2G30410 Arabidopsis thaliana HOM05D004600 ORTHO05D005471 1.8e-46 189.1 114 88.6
Carub.0004s1157 Capsella rubella HOM05D004600 ORTHO05D005471 1.2e-45 186.4 114 86.8
CARHR123850 Cardamine hirsuta HOM05D004600 ORTHO05D005471 1.7e-44 182.6 112 87.5
Thhalv10017954m.g Eutrema salsugineum HOM05D004600 ORTHO05D005471 2.9e-44 181.8 114 85.1
AL136U10020 Arabidopsis lyrata HOM05D004600 ORTHO05D005471 6.4e-44 180.6 114 86.0
AL4G25280 Arabidopsis lyrata HOM05D004600 ORTHO05D005471 6.4e-44 180.6 114 86.0
THA.LOC104821611 Tarenaya hassleriana HOM05D004600 ORTHO05D005471 3.9e-41 171.4 114 81.6
Carub.0004s0600 Capsella rubella HOM05D004600 ORTHO05D005471 5.1e-41 171.0 112 83.9
THA.LOC104805733 Tarenaya hassleriana HOM05D004600 ORTHO05D005471 5.1e-41 171.0 114 81.6
Gohir.D11G317800 Gossypium hirsutum HOM05D004600 ORTHO05D005471 1.5e-40 169.5 114 78.1
Gorai.007G347600 Gossypium raimondii HOM05D004600 ORTHO05D005471 1.5e-40 169.5 114 78.1
Lalb_Chr10g0107261 Lupinus albus HOM05D004600 ORTHO05D005471 7.3e-40 167.2 114 76.3
arahy.Tifrunner.gnm1.ann1.FL4BP3 Arachis hypogaea HOM05D004600 ORTHO05D005471 2.1e-39 165.6 114 77.2
Thecc.05G234100 Theobroma cacao HOM05D004600 ORTHO05D005471 2.1e-39 165.6 114 78.1
CSS0000756 Camellia sinensis var. sinensis HOM05D004600 ORTHO05D005471 2.8e-39 165.2 114 75.4
Duzib177G1065 Durio zibethinus HOM05D004600 ORTHO05D005471 3.6e-39 164.9 114 78.1
CANSAT56G0524 Cannabis sativa HOM05D004600 ORTHO05D005471 4.8e-39 164.5 110 78.2
Gohir.A11G302200 Gossypium hirsutum HOM05D004600 ORTHO05D005471 4.8e-39 164.5 114 76.3
arahy.Tifrunner.gnm1.ann1.8V97K8 Arachis hypogaea HOM05D004600 ORTHO05D005471 6.2e-39 164.1 114 76.3
BcaNung06780 Brassica carinata HOM05D004600 ORTHO05D005471 8.1e-39 163.7 97 88.7
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 8.1e-39 163.7 111 77.5
Hma1.2p1_2581F.1_g324750 Hydrangea macrophylla HOM05D004600 ORTHO05D005471 8.1e-39 163.7 112 75.9
Eucgr.E01748 Eucalyptus grandis HOM05D004600 ORTHO05D005471 1.8e-38 162.5 114 74.6
Ca_06414_v3 Cicer arietinum L. HOM05D004600 ORTHO05D005471 2.4e-38 162.2 115 75.7
CSS0047927 Camellia sinensis var. sinensis HOM05D004600 ORTHO05D005471 3.1e-38 161.8 114 75.4
GSVIVG01018312001 Vitis vinifera HOM05D004600 ORTHO05D005471 3.1e-38 161.8 114 75.4
Ciclev10033122m.g Citrus clementina HOM05D004600 ORTHO05D005471 4.0e-38 161.4 113 75.2
Cpa.g.sc73.56 Carica papaya HOM05D004600 ORTHO05D005471 5.3e-38 161.0 114 75.4
FvH4_7g07840 Fragaria vesca HOM05D004600 ORTHO05D005471 5.3e-38 161.0 115 73.9
FvH4_7g08250 Fragaria vesca HOM05D004600 ORTHO05D005471 5.3e-38 161.0 115 73.9
FAN01G2185 Fragaria x ananassa HOM05D004600 ORTHO05D005471 5.3e-38 161.0 115 73.9
FAN06G4779 Fragaria x ananassa HOM05D004600 ORTHO05D005471 5.3e-38 161.0 115 73.9
TPR.G31719 Trifolium pratense HOM05D004600 ORTHO05D005471 5.3e-38 161.0 115 74.8
Manes.08G156800 Manihot esculenta HOM05D004600 ORTHO05D005471 6.9e-38 160.6 114 73.7
QL02p099100 Quercus lobata HOM05D004600 ORTHO05D005471 6.9e-38 160.6 113 75.2
EL10Ac2g03665 Beta vulgaris HOM05D004600 ORTHO05D005471 9.0e-38 160.2 114 74.6
TWI34G1465 Tripterygium wilfordii HOM05D004600 ORTHO05D005471 9.0e-38 160.2 112 75.0
Lsat_1_v5_gn_3_31540 Lactuca sativa HOM05D004600 ORTHO05D005471 1.2e-37 159.8 114 75.4
Manes.09G132900 Manihot esculenta HOM05D004600 ORTHO05D005471 1.2e-37 159.8 108 75.9
CANSAT80G0198 Cannabis sativa HOM05D004600 ORTHO05D005471 1.5e-37 159.5 110 75.5
Cfa003694 Carpinus fangiana HOM05D004600 ORTHO05D005471 1.5e-37 159.5 114 72.8
Medtr5g094290 Medicago truncatula HOM05D004600 ORTHO05D005471 1.5e-37 159.5 115 73.0
DCAR_002257 Daucus carota HOM05D004600 ORTHO05D005471 2.0e-37 159.1 112 75.0
ECA234G0066 Erigeron canadensis HOM05D004600 ORTHO05D005471 2.0e-37 159.1 114 75.4
TWI32G0106 Tripterygium wilfordii HOM05D004600 ORTHO05D005471 3.4e-37 158.3 112 74.1
Hund03244 Selenicereus undatus HOM05D004600 ORTHO05D005471 4.5e-37 157.9 113 72.6
HanXRQChr17g0540501 Helianthus annuus HOM05D004600 ORTHO05D005471 5.8e-37 157.5 114 74.6
Actinidia30941 Actinidia chinensis HOM05D004600 ORTHO05D005471 7.6e-37 157.1 112 75.0
Glyma.12G219600 Glycine max HOM05D004600 ORTHO05D005471 7.6e-37 157.1 110 75.5
Potri.013G071100 Populus trichocarpa HOM05D004600 ORTHO05D005471 7.6e-37 157.1 112 74.1
Rhsim07G0038000 Rhododendron simsii HOM05D004600 ORTHO05D005471 9.9e-37 156.8 114 73.7
AUR62010214 Chenopodium quinoa HOM05D004600 ORTHO05D005471 1.3e-36 156.4 114 72.8
AUR62023888 Chenopodium quinoa HOM05D004600 ORTHO05D005471 1.3e-36 156.4 114 72.8
Oeu011239.1 Olea europaea HOM05D004600 ORTHO05D005471 1.3e-36 156.4 114 71.9
TAR374G1537 Trochodendron aralioides HOM05D004600 ORTHO05D005471 1.3e-36 156.4 113 71.7
Ciclev10017245m.g Citrus clementina HOM05D004600 ORTHO05D005471 1.7e-36 156.0 113 73.5
RcHm_v2.0_Chr1g0341631 Rosa chinensis HOM05D004600 ORTHO05D005471 1.7e-36 156.0 115 71.3
Aa31LG2G2070 Aethionema arabicum HOM05D004600 ORTHO05D005471 2.2e-36 155.6 111 73.9
Medtr5g094860 Medicago truncatula HOM05D004600 ORTHO05D005471 2.2e-36 155.6 115 71.3
Phvul.008G274500 Phaseolus vulgaris HOM05D004600 ORTHO05D005471 2.2e-36 155.6 114 73.7
Prupe.2G105900 Prunus persica HOM05D004600 ORTHO05D005471 2.2e-36 155.6 115 71.3
HanXRQChr06g0175191 Helianthus annuus HOM05D004600 ORTHO05D005471 3.8e-36 154.8 114 73.7
DCAR_002240 Daucus carota HOM05D000064 ORTHO05D001307 4.9e-36 154.5 106 76.4
MD07G1080900 Malus domestica HOM05D004600 ORTHO05D005471 4.9e-36 154.5 115 71.3
Migut.N01726 Erythranthe guttata HOM05D004600 ORTHO05D005471 6.4e-36 154.1 114 71.1
Nitab4.5_0006200g0020 Nicotiana tabacum HOM05D004600 ORTHO05D005471 6.4e-36 154.1 114 72.8
Peaxi162Scf00309g00111 Petunia axillaris HOM05D004600 ORTHO05D005471 6.4e-36 154.1 114 71.9
SalBow5G2739 Salvia bowleyana HOM05D004600 ORTHO05D005471 6.4e-36 154.1 114 71.9
SalBow5G4978 Salvia bowleyana HOM05D004600 ORTHO05D005471 6.4e-36 154.1 114 71.9
Solyc01g068400.3 Solanum lycopersicum HOM05D004600 ORTHO05D005471 6.4e-36 154.1 114 71.1
Sopen01g030360 Solanum pennellii HOM05D004600 ORTHO05D005471 6.4e-36 154.1 114 71.1
CiPaw.11G057300 Carya illinoinensis HOM05D004600 ORTHO05D005471 8.4e-36 153.7 114 71.9
Cc10_g08750 Coffea canephora HOM05D004600 ORTHO05D005471 8.4e-36 153.7 106 76.4
MD02G1232800 Malus domestica HOM05D004600 ORTHO05D005471 8.4e-36 153.7 115 69.6
VMungo0647G0484 Vigna mungo HOM05D004600 ORTHO05D005471 8.4e-36 153.7 114 71.9
Sed0013640 Sechium edule HOM05D004600 ORTHO05D005471 1.1e-35 153.3 112 70.5
Sabra13G0062000 Salix brachista HOM05D004600 ORTHO05D005471 1.4e-35 152.9 112 73.2
Actinidia05778 Actinidia chinensis HOM05D000441 ORTHO05D005471 1.9e-35 152.5 104 77.9
PGR042G2124 Punica granatum HOM05D004600 ORTHO05D005471 1.9e-35 152.5 114 70.2
PGSC0003DMG400017954 Solanum tuberosum HOM05D004600 ORTHO05D005471 1.9e-35 152.5 114 70.2
Glyma.13G281700 Glycine max HOM05D004600 ORTHO05D005471 3.2e-35 151.8 112 73.2
MSTRG.28140 Avicennia marina HOM05D004600 ORTHO05D005471 5.4e-35 151.0 114 71.1
ClCG06G000640 Citrullus lanatus HOM05D004600 ORTHO05D005471 7.1e-35 150.6 112 68.8
LjContig00272g0018481 Lotus japonicus HOM05D004600 ORTHO05D005471 9.3e-35 150.2 110 73.6
Sed0004677 Sechium edule HOM05D004600 ORTHO05D005471 9.3e-35 150.2 112 68.8
Peaxi162Scf00519g00014 Petunia axillaris HOM05D004600 ORTHO05D005471 1.2e-34 149.8 104 75.0
Nn6g33746 Nelumbo nucifera HOM05D004600 ORTHO05D005471 1.6e-34 149.4 104 74.0
PSO063G0817 Papaver somniferum HOM05D004600 ORTHO05D005471 1.6e-34 149.4 114 67.5
PSO782G3599 Papaver somniferum HOM05D004600 ORTHO05D005471 1.6e-34 149.4 114 67.5
Aqoxy3G02625 Aquilegia oxysepala HOM05D004600 ORTHO05D005471 2.1e-34 149.1 113 68.1
Aqoxy4G01604 Aquilegia oxysepala HOM05D004600 ORTHO05D005471 2.1e-34 149.1 113 68.1
CAN.G179.37 Capsicum annuum HOM05D004600 ORTHO05D005471 4.6e-34 147.9 114 69.3
MBI04_g38566_MAGBIO Magnolia biondii HOM05D004600 ORTHO05D005471 6.0e-34 147.5 113 66.4
MELO3C022478.2 Cucumis melo HOM05D004600 ORTHO05D005471 1.8e-33 146.0 105 70.5
ATR0594G180 Amborella trichopoda HOM05D004600 ORTHO05D005471 3.0e-33 145.2 113 68.1
CsaV3_6G006410 Cucumis sativus L. HOM05D004600 ORTHO05D005471 3.0e-33 145.2 105 71.4
FAN10G3323 Fragaria x ananassa HOM05D004600 ORTHO05D005471 3.9e-33 144.8 146 58.2
SalBow2G1105 Salvia bowleyana HOM05D004600 ORTHO05D005471 5.1e-33 144.4 114 67.5
CDE02G3136 Ceratophyllum demersum HOM05D004600 ORTHO05D005471 8.7e-33 143.7 113 67.3
vmacro13519 Vaccinium macrocarpon HOM05D004600 ORTHO05D005471 2.5e-32 142.1 142 58.5
Aa31LG5G6310 Aethionema arabicum HOM05D004600 ORTHO05D005471 5.6e-32 141.0 115 70.4
HPP92_003331 Vanilla planifolia HOM05D004600 ORTHO05D005471 7.4e-32 140.6 107 67.3
SEGI_02498 Sequoiadendron giganteum HOM05D004600 ORTHO05D005471 9.6e-32 140.2 113 64.6
Atru.chr2.1648 Acer truncatum HOM05D004600 ORTHO05D005471 6.2e-31 137.5 80 86.2
Nitab4.5_0002801g0010 Nicotiana tabacum HOM05D004600 ORTHO05D005471 1.4e-30 136.3 145 53.8
Os02g0816500 Oryza sativa ssp. japonica HOM05D004600 ORTHO05D005471 1.4e-30 136.3 84 81.0
MBI14_g39049_MAGBIO Magnolia biondii HOM05D004600 ORTHO05D005471 4.0e-30 134.8 113 61.9
Zm00001eb258870 Zea mays HOM05D004600 ORTHO05D005471 9.0e-30 133.7 79 83.5
BcaNung05666 Brassica carinata HOM05D004600 ORTHO05D005471 2.0e-29 132.5 74 90.5
SEGI_10368 Sequoiadendron giganteum HOM05D004600 ORTHO05D005471 3.4e-29 131.7 113 60.2
BcaNung05668 Brassica carinata HOM05D004600 ORTHO05D005471 5.8e-29 131.0 74 90.5
Haze_15791 Corylus avellana HOM05D004600 ORTHO05D005471 7.6e-29 130.6 80 81.2
Duzib106G0868 Durio zibethinus HOM05D004600 ORTHO05D005471 9.9e-29 130.2 99 69.7
Psat2g010800 Pisum sativum HOM05D004600 ORTHO05D005471 4.9e-28 127.9 80 81.2
Psat6g223560 Pisum sativum HOM05D004600 ORTHO05D005471 4.9e-28 127.9 80 81.2
COL.COLO4_33093 Corchorus olitorius HOM05D004600 ORTHO05D005471 1.1e-27 126.7 92 72.8
unitig_22.g5795 Utricularia gibba HOM05D004600 ORTHO05D005471 1.3e-25 119.8 106 60.4
arahy.Tifrunner.gnm1.ann1.AN2C62 Arachis hypogaea HOM05D004600 ORTHO05D005471 6.7e-25 117.5 94 69.1
arahy.Tifrunner.gnm1.ann1.TEM6YH Arachis hypogaea HOM05D004600 ORTHO05D005471 6.2e-23 110.9 77 76.6
RcHm_v2.0_Chr1g0341741 Rosa chinensis HOM05D004600 ORTHO05D005471 6.2e-23 110.9 65 83.1
COL.COLO4_34174 Corchorus olitorius HOM05D004600 ORTHO05D005471 8.2e-23 110.5 68 80.9
SMO140G0024 Selaginella moellendorffii HOM05D004600 ORTHO05D005471 1.8e-22 109.4 77 68.8
Mapoly0038s0031 Marchantia polymorpha HOM05D004600 ORTHO05D005471 9.0e-22 107.1 103 55.3
RhsimUnG0214300 Rhododendron simsii HOM05D004600 ORTHO05D005471 2.6e-21 105.5 103 52.4
CBR_g52286 Chara braunii HOM05D004600 ORTHO05D005471 1.9e-19 99.4 92 59.8
A03p17010 Brassica napus HOM05D004600 ORTHO05D005471 9.3e-19 97.1 57 87.7
arahy.Tifrunner.gnm1.ann1.M3PSJH Arachis hypogaea HOM05D004254 ORTHO05D005184 1.2e-18 96.7 69 71.0
AagrBONN_evm.TU.Sc2ySwM_368.563 Anthoceros agrestis HOM05D001974 ORTHO05D001995 1.3e-17 93.2 96 52.1
C03p20070 Brassica napus HOM05D004600 ORTHO05D005471 1.8e-17 92.8 96 60.4
PSO017G3083 Papaver somniferum HOM05D004600 ORTHO05D005471 3.3e-16 88.6 111 45.9
Pp3c8_15900 Physcomitrium patens HOM05D004600 ORTHO05D005471 5.7e-16 87.8 109 43.1
BcaC01g05996 Brassica carinata HOM05D004600 ORTHO05D005471 7.4e-16 87.4 94 58.5
Pp3c5_8620 Physcomitrium patens HOM05D004600 ORTHO05D005471 9.7e-16 87.0 79 51.9
Cre16.g670800 Chlamydomonas reinhardtii HOM05D004600 ORTHO05D005471 1.4e-14 83.2 106 48.1
AUR62013210 Chenopodium quinoa HOM05D004600 ORTHO05D005471 2.4e-14 82.4 63 71.4
MCO15G208 Micromonas commoda HOM05D004600 ORTHO05D005471 2.4e-14 82.4 98 49.0
COL.COLO4_33692 Corchorus olitorius HOM05D004600 ORTHO05D005471 3.1e-14 82.0 97 51.5
Sc01g0008330 Simmondsia chinensis HOM05D004600 ORTHO05D005471 3.4e-13 78.6 65 63.1
Pp3c15_6440 Physcomitrium patens HOM05D004600 ORTHO05D005471 1.3e-12 76.6 103 44.7
RcHm_v2.0_Chr1g0341961 Rosa chinensis HOM05D004600 ORTHO05D005471 1.3e-12 76.6 51 76.5
FAN01G1805 Fragaria x ananassa HOM05D004600 ORTHO05D005471 1.7e-12 76.3 57 70.2
HanXRQChr10g0286821 Helianthus annuus HOM05D004600 ORTHO05D005471 1.7e-12 76.3 45 80.0
RcHm_v2.0_Chr4g0446751 Rosa chinensis HOM05D004600 ORTHO05D005471 5.0e-12 74.7 50 76.0
SGA_v2.0_scaffold77G25264 Striga asiatica HOM05D000763 ORTHO05D000599 2.5e-11 72.4 42 85.7
MBI18_g40062_MAGBIO Magnolia biondii HOM05D004600 ORTHO05D005471 3.2e-11 72.0 45 77.8
RcHm_v2.0_Chr1g0342531 Rosa chinensis HOM05D004600 ORTHO05D005471 4.2e-11 71.6 43 81.4
PRCOL_00002235 Prasinoderma coloniale HOM05D004600 ORTHO05D005471 5.5e-11 71.2 100 42.0
RcHm_v2.0_Chr3g0457191 Rosa chinensis HOM05D004600 ORTHO05D005471 5.5e-11 71.2 49 73.5
HanXRQChr02g0044381 Helianthus annuus HOM05D004600 ORTHO05D005471 7.2e-11 70.9 43 76.7
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 2.7e-10 68.9 63 55.6
Oeu019263.1 Olea europaea HOM05D004600 ORTHO05D005471 8.8e-09 63.9 54 63.0
BolC3t14384H Brassica oleracea HOM05D004600 ORTHO05D005471 3.3e-08 62.0 75 54.7
arahy.Tifrunner.gnm1.ann1.3LH6CZ Arachis hypogaea HOM05D004600 ORTHO05D021519 5.7e-08 61.2 92 44.6
COL.COLO4_33704 Corchorus olitorius HOM05D004600 ORTHO05D005471 1.3e-07 60.1 90 47.8
Pp3c12_22810 Physcomitrium patens HOM05D004600 ORTHO05D005471 1.4e-06 56.6 59 44.1


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