Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04076 Brassica carinata HOM05D004710 ORTHO05D005445 3.9e-219 764.6 419 100.0
Thhalv10016548m.g Eutrema salsugineum HOM05D004710 ORTHO05D005445 6.8e-187 657.5 506 74.9
Sp4g13350 Schrenkiella parvula HOM05D004710 ORTHO05D005445 2.0e-186 656.0 506 74.7
BcaB06g28390 Brassica carinata HOM05D004710 ORTHO05D005445 2.7e-183 645.6 509 73.7
A04p23580 Brassica napus HOM05D004710 ORTHO05D005445 5.9e-183 644.4 505 73.1
AT2G30880 Arabidopsis thaliana HOM05D004710 ORTHO05D005445 4.2e-181 638.3 506 72.7
BraA04t17884Z Brassica rapa HOM05D004710 ORTHO05D005445 4.7e-180 634.8 505 73.7
BcaB06g28457 Brassica carinata HOM05D004710 ORTHO05D005445 6.1e-180 634.4 503 73.4
BolC4t27504H Brassica oleracea HOM05D004710 ORTHO05D005445 6.1e-180 634.4 503 73.4
AL4G25830 Arabidopsis lyrata HOM05D004710 ORTHO05D005445 3.0e-179 632.1 506 71.9
CARHR124360 Cardamine hirsuta HOM05D004710 ORTHO05D005445 2.6e-178 629.0 506 71.7
Carub.0004s1208 Capsella rubella HOM05D004710 ORTHO05D005445 5.7e-178 627.9 506 71.3
C04p60020 Brassica napus HOM05D004710 ORTHO05D005445 2.7e-175 619.0 495 72.9
Aa31LG5G6040 Aethionema arabicum HOM05D004710 ORTHO05D005445 2.9e-161 572.4 515 66.6
THA.LOC104800818 Tarenaya hassleriana HOM05D004710 ORTHO05D005445 1.3e-150 537.0 508 63.0
Gorai.001G211100 Gossypium raimondii HOM05D004710 ORTHO05D005445 7.3e-141 504.6 507 60.9
Gohir.A07G182700 Gossypium hirsutum HOM05D004710 ORTHO05D005445 2.1e-140 503.1 507 60.7
Duzib211G0680 Durio zibethinus HOM05D004710 ORTHO05D005445 4.7e-140 501.9 507 60.4
Atru.chr6.2043 Acer truncatum HOM05D004710 ORTHO05D005445 6.2e-140 501.5 485 60.6
Ciclev10031314m.g Citrus clementina HOM05D004710 ORTHO05D005445 2.0e-138 496.5 505 59.6
COL.COLO4_38396 Corchorus olitorius HOM05D004710 ORTHO05D005445 2.0e-138 496.5 506 59.9
Thecc.01G168300 Theobroma cacao HOM05D004710 ORTHO05D005445 7.6e-138 494.6 508 59.6
Gohir.A08G051500 Gossypium hirsutum HOM05D004710 ORTHO05D005445 9.9e-138 494.2 485 61.2
GSVIVG01020835001 Vitis vinifera HOM05D004710 ORTHO05D005445 2.9e-137 492.7 505 60.2
Gohir.D08G061300 Gossypium hirsutum HOM05D004710 ORTHO05D005445 1.1e-136 490.7 485 60.8
VMungo0647G1334 Vigna mungo HOM05D004710 ORTHO05D005445 1.9e-136 490.0 484 60.3
Gorai.004G063400 Gossypium raimondii HOM05D004710 ORTHO05D005445 3.2e-136 489.2 485 60.6
Duzib133G0803 Durio zibethinus HOM05D004710 ORTHO05D005445 4.2e-136 488.8 488 60.0
Potri.005G205300 Populus trichocarpa HOM05D004710 ORTHO05D005445 7.1e-136 488.0 492 59.6
CANSAT64G1857 Cannabis sativa HOM05D004710 ORTHO05D005445 1.2e-135 487.3 486 59.7
CiPaw.04G137800 Carya illinoinensis HOM05D004710 ORTHO05D005445 1.6e-135 486.9 486 59.3
Potri.002G057300 Populus trichocarpa HOM05D004710 ORTHO05D005445 1.6e-135 486.9 507 58.2
Glyma.14G030600 Glycine max HOM05D004710 ORTHO05D005445 2.1e-135 486.5 498 59.2
Phvul.008G194500 Phaseolus vulgaris HOM05D004710 ORTHO05D005445 2.1e-135 486.5 498 59.0
TWI59G0681 Tripterygium wilfordii HOM05D004710 ORTHO05D005445 2.7e-135 486.1 504 58.9
Cpa.g.sc50.115 Carica papaya HOM05D004710 ORTHO05D005445 3.5e-135 485.7 492 59.3
Glyma.02G284400 Glycine max HOM05D004710 ORTHO05D005445 4.6e-135 485.3 498 59.0
QL93p2016_0028 Quercus lobata HOM05D004710 ORTHO05D005445 4.6e-135 485.3 495 58.8
Medtr5g091000 Medicago truncatula HOM05D004710 ORTHO05D005445 6.0e-135 485.0 479 60.8
Gohir.D07G189500 Gossypium hirsutum HOM05D004710 ORTHO05D005445 3.0e-134 482.6 476 61.1
QL08p045042 Quercus lobata HOM05D004710 ORTHO05D005445 3.0e-134 482.6 476 59.9
Lalb_Chr10g0106551 Lupinus albus HOM05D004710 ORTHO05D005445 5.1e-134 481.9 502 58.8
PGR042G2540 Punica granatum HOM05D004710 ORTHO05D005445 6.6e-134 481.5 506 58.5
Ca_06262_v3 Cicer arietinum L. HOM05D004710 ORTHO05D005445 8.7e-134 481.1 492 59.8
Cfa023545 Carpinus fangiana HOM05D004710 ORTHO05D005445 1.5e-133 480.3 507 58.0
Eucgr.A02027 Eucalyptus grandis HOM05D004710 ORTHO05D005445 5.6e-133 478.4 490 58.2
TPR.G10151 Trifolium pratense HOM05D004710 ORTHO05D005445 5.6e-133 478.4 499 58.3
Cc05_g01390 Coffea canephora HOM05D004710 ORTHO05D005445 7.3e-133 478.0 504 58.1
Prupe.3G177900 Prunus persica HOM05D004710 ORTHO05D005445 7.3e-133 478.0 504 58.1
Rhsim12G0010700 Rhododendron simsii HOM05D004710 ORTHO05D005445 1.3e-132 477.2 490 59.4
vmacro08738 Vaccinium macrocarpon HOM05D004710 ORTHO05D005445 6.2e-132 474.9 490 58.8
FvH4_6g38730 Fragaria vesca HOM05D004710 ORTHO05D005445 8.1e-132 474.6 486 58.6
Psat2g017280 Pisum sativum HOM05D004710 ORTHO05D005445 8.1e-132 474.6 496 58.9
arahy.Tifrunner.gnm1.ann1.BVM079 Arachis hypogaea HOM05D004710 ORTHO05D005445 2.4e-131 473.0 501 57.9
Lalb_Chr04g0248931 Lupinus albus HOM05D004710 ORTHO05D005445 5.3e-131 471.9 484 58.7
arahy.Tifrunner.gnm1.ann1.3YJ1U6 Arachis hypogaea HOM05D004710 ORTHO05D005445 9.0e-131 471.1 501 57.7
RcHm_v2.0_Chr2g0152261 Rosa chinensis HOM05D004710 ORTHO05D005445 5.8e-130 468.4 486 58.4
CSS0019642 Camellia sinensis var. sinensis HOM05D004710 ORTHO05D005445 1.3e-129 467.2 490 59.4
MD17G1134500 Malus domestica HOM05D004710 ORTHO05D005445 2.9e-129 466.1 480 58.3
FAN05G2509 Fragaria x ananassa HOM05D004710 ORTHO05D005445 4.9e-129 465.3 506 56.7
MD09G1148200 Malus domestica HOM05D004710 ORTHO05D005445 6.4e-129 464.9 475 60.0
FAN02G0505 Fragaria x ananassa HOM05D004710 ORTHO05D005445 4.2e-128 462.2 516 55.8
TAR624G0695 Trochodendron aralioides HOM05D004710 ORTHO05D005445 7.1e-128 461.5 486 57.0
Sopen05g017300 Solanum pennellii HOM05D004710 ORTHO05D005445 2.7e-127 459.5 492 57.9
MSTRG.14902 Avicennia marina HOM05D004710 ORTHO05D005445 1.3e-126 457.2 486 56.4
Hma1.2p1_0073F.1_g038510 Hydrangea macrophylla HOM05D004710 ORTHO05D005445 1.8e-126 456.8 478 57.3
ClCG07G010740 Citrullus lanatus HOM05D004710 ORTHO05D005445 3.9e-126 455.7 503 56.7
Sabra02G0046700 Salix brachista HOM05D004710 ORTHO05D005445 1.1e-125 454.1 490 56.5
TAR625G1186 Trochodendron aralioides HOM05D004710 ORTHO05D005445 1.1e-125 454.1 502 55.6
LjContig00049g0017244 Lotus japonicus HOM05D004710 ORTHO05D005445 1.9e-125 453.4 498 57.2
Sabra05G0156000 Salix brachista HOM05D004710 ORTHO05D005445 1.9e-125 453.4 529 55.2
Lj6g0000252 Lotus japonicus HOM05D004710 ORTHO05D005445 2.5e-125 453.0 487 56.3
MELO3C016183.2 Cucumis melo HOM05D004710 ORTHO05D005445 4.3e-125 452.2 503 56.5
CsaV3_4G007580 Cucumis sativus L. HOM05D004710 ORTHO05D005445 4.3e-125 452.2 489 57.5
FAN14G4495 Fragaria x ananassa HOM05D004710 ORTHO05D005445 5.6e-125 451.8 495 56.6
Nn7g38035 Nelumbo nucifera HOM05D004710 ORTHO05D005445 5.6e-125 451.8 493 56.4
SGA_v2.0_scaffold73G24477 Striga asiatica HOM05D004710 ORTHO05D005445 4.8e-124 448.7 493 55.6
Sed0010176 Sechium edule HOM05D004710 ORTHO05D005445 2.0e-122 443.4 503 55.5
Lj6g0021308 Lotus japonicus HOM05D004710 ORTHO05D005445 2.6e-122 443.0 473 56.4
Sc15g0002190 Simmondsia chinensis HOM05D004710 ORTHO05D005445 5.8e-122 441.8 487 55.4
Actinidia11220 Actinidia chinensis HOM05D004710 ORTHO05D005445 4.9e-121 438.7 469 56.9
Aqoxy4G00042 Aquilegia oxysepala HOM05D004710 ORTHO05D005445 1.1e-120 437.6 503 53.5
Migut.M00073 Erythranthe guttata HOM05D004710 ORTHO05D005445 1.1e-120 437.6 507 55.4
EL10Ac9g22830 Beta vulgaris HOM05D004710 ORTHO05D005445 9.3e-120 434.5 517 52.6
Sed0002024 Sechium edule HOM05D004710 ORTHO05D005445 9.3e-120 434.5 506 55.1
HanXRQChr17g0541191 Helianthus annuus HOM05D004710 ORTHO05D005445 2.3e-118 429.9 510 53.5
ATR0763G198 Amborella trichopoda HOM05D004710 ORTHO05D005445 5.1e-118 428.7 487 53.2
Peaxi162Scf00416g00116 Petunia axillaris HOM05D004710 ORTHO05D005445 6.7e-118 428.3 493 56.6
Hund08425 Selenicereus undatus HOM05D004710 ORTHO05D005445 3.3e-117 426.0 487 55.0
PSO675G4395 Papaver somniferum HOM05D004710 ORTHO05D005445 7.4e-117 424.9 510 52.9
Actinidia06121 Actinidia chinensis HOM05D004710 ORTHO05D005445 3.7e-116 422.5 421 60.3
PSO675G5558 Papaver somniferum HOM05D004710 ORTHO05D005445 8.2e-116 421.4 509 52.8
BcaC01g06018 Brassica carinata HOM05D004710 ORTHO05D005445 1.4e-115 420.6 496 57.7
Eucgr.K01227 Eucalyptus grandis HOM05D004710 ORTHO05D005445 2.4e-115 419.9 493 53.8
HPP92_018652 Vanilla planifolia HOM05D004710 ORTHO05D005445 4.5e-114 415.6 485 52.2
Zm00001eb065510 Zea mays HOM05D004710 ORTHO05D005445 7.6e-114 414.8 506 51.4
ECA246G2799 Erigeron canadensis HOM05D004710 ORTHO05D005445 1.3e-113 414.1 468 54.5
DCAR_013324 Daucus carota HOM05D004710 ORTHO05D005445 2.2e-113 413.3 490 54.3
HanXRQChr06g0171641 Helianthus annuus HOM05D004710 ORTHO05D005445 8.4e-113 411.4 510 51.8
Lsat_1_v5_gn_3_35160 Lactuca sativa HOM05D004710 ORTHO05D005445 3.2e-112 409.5 484 53.7
Os03g0666200 Oryza sativa ssp. japonica HOM05D004710 ORTHO05D005445 3.5e-111 406.0 506 49.8
Manes.01G130800 Manihot esculenta HOM05D004710 ORTHO05D005445 4.8e-108 395.6 429 56.6
FAN09G1050 Fragaria x ananassa HOM05D004710 ORTHO05D005445 1.8e-107 393.7 508 51.6
Nitab4.5_0003177g0030 Nicotiana tabacum HOM05D004710 ORTHO05D005445 1.8e-107 393.7 381 60.9
Solyc05g021100.2 Solanum lycopersicum HOM05D004710 ORTHO05D005445 3.0e-102 376.3 431 55.9
C03p20350 Brassica napus HOM05D004710 ORTHO05D005445 8.7e-102 374.8 388 63.1
BolC3t14413H Brassica oleracea HOM05D004710 ORTHO05D005445 8.7e-102 374.8 388 63.1
Gohir.1Z049561 Gossypium hirsutum HOM05D004710 ORTHO05D005445 2.5e-101 373.2 358 60.6
Zm00001eb117740 Zea mays HOM05D004710 ORTHO05D005445 5.0e-97 359.0 483 47.6
AUR62015127 Chenopodium quinoa HOM05D004710 ORTHO05D005445 5.5e-96 355.5 490 48.4
Lj1C589T0 Lonicera japonica HOM05D004710 ORTHO05D005445 4.7e-95 352.4 534 46.8
Ah.01g013580 Amaranthus hybridus HOM05D004710 ORTHO05D005445 3.8e-89 332.8 483 46.6
PGR142G3117 Punica granatum HOM05D004710 ORTHO05D005445 1.9e-88 330.5 453 48.3
SEGI_28206 Sequoiadendron giganteum HOM05D004710 ORTHO05D005445 4.8e-84 315.8 387 50.4
SGA_v2.0_scaffold181G39713 Striga asiatica HOM05D004710 ORTHO05D005445 2.4e-83 313.5 469 47.5
Dinv09874 Davidia involucrata HOM05D004710 ORTHO05D005445 1.7e-81 307.4 213 75.6
MBI18_g07571_MAGBIO Magnolia biondii HOM05D004710 ORTHO05D005445 2.3e-78 297.0 444 47.7
Nitab4.5_0000019g0200 Nicotiana tabacum HOM05D004710 ORTHO05D005445 2.6e-77 293.5 395 51.4
Pp3c23_16670 Physcomitrium patens HOM05D004710 ORTHO05D005445 3.2e-72 276.6 311 52.1
Zm00001eb217790 Zea mays HOM05D004710 ORTHO05D005445 5.7e-69 265.8 412 44.7
FAN06G4649 Fragaria x ananassa HOM05D004710 ORTHO05D005445 1.8e-67 260.8 185 74.1
Mapoly0039s0099 Marchantia polymorpha HOM05D004710 ORTHO05D005445 4.1e-67 259.6 416 42.3
SMO169G0289 Selaginella moellendorffii HOM05D004710 ORTHO05D005445 1.7e-65 254.2 315 48.3
CAN.G237.1 Capsicum annuum HOM05D004710 ORTHO05D005445 1.2e-63 248.1 379 49.1
AagrBONN_evm.TU.Sc2ySwM_228.2862 Anthoceros agrestis HOM05D004710 ORTHO05D005445 2.3e-57 227.3 385 40.3
A03p17240 Brassica napus HOM05D004710 ORTHO05D005445 2.8e-55 220.3 182 74.2
Oeu040170.3 Olea europaea HOM05D004710 ORTHO05D005445 6.8e-54 215.7 396 40.9
MBI18_g48251_MAGBIO Magnolia biondii HOM05D004710 ORTHO05D005445 1.5e-48 198.0 219 53.4
Pp3c13_22640 Physcomitrium patens HOM05D004710 ORTHO05D005445 3.4e-45 186.8 333 37.8
Aa31LG1G7230 Aethionema arabicum HOM05D004710 ORTHO05D005445 1.1e-40 171.8 221 52.9
Haze_13560 Corylus avellana HOM05D004710 ORTHO05D005445 1.9e-40 171.0 253 48.6
Pp3c26_520 Physcomitrium patens HOM05D004710 ORTHO05D005445 1.8e-38 164.5 316 36.4
FAN08G2380 Fragaria x ananassa HOM05D004710 ORTHO05D005445 3.1e-38 163.7 97 80.4
FAN18G0865 Fragaria x ananassa HOM05D004710 ORTHO05D005445 1.3e-36 158.3 208 48.6
Haze_13559 Corylus avellana HOM05D004710 ORTHO05D005445 8.3e-36 155.6 93 81.7
Aa31LG1G7240 Aethionema arabicum HOM05D004710 ORTHO05D005445 1.9e-35 154.5 146 65.1
CBR_g48423 Chara braunii HOM05D004710 ORTHO05D005445 5.4e-35 152.9 364 32.4
Os07g0138100 Oryza sativa ssp. japonica HOM05D004710 ORTHO05D005445 1.7e-33 147.9 107 61.7
HPP92_018658 Vanilla planifolia HOM05D004710 ORTHO05D005445 4.4e-29 133.3 88 75.0
Dinv09873 Davidia involucrata HOM05D004710 ORTHO05D005445 2.9e-28 130.6 129 61.2
BraA03t10998Z Brassica rapa HOM05D004710 ORTHO05D005445 2.3e-25 120.9 122 58.2
AUR62017588 Chenopodium quinoa HOM05D004710 ORTHO05D005445 6.2e-23 112.8 176 46.0
SHI10530 Sapria himalayana HOM05D000906 ORTHO05D000713 2.3e-09 67.8 57 71.9
Lj6g0000199 Lotus japonicus HOM05D004710 ORTHO05D005445 4.8e-07 60.1 69 50.7
AUR62017587 Chenopodium quinoa HOM05D004710 ORTHO05D005445 1.4e-06 58.5 86 39.5
MCO09G271 Micromonas commoda HOM05D004710 ORTHO05D005445 1.8e-06 58.2 92 33.7


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