Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04014 Brassica carinata HOM05D007540 ORTHO05D009531 2.7e-73 278.5 134 100.0
BcaB01g04017 Brassica carinata HOM05D007540 ORTHO05D009531 2.7e-73 278.5 134 100.0
BcaB01g04013 Brassica carinata HOM05D007540 ORTHO05D009531 5.1e-72 274.2 134 98.5
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 4.4e-71 271.2 134 97.8
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 8.2e-70 266.9 134 96.3
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 1.8e-69 265.8 137 95.6
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 2.2e-46 189.1 136 74.3
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 2.8e-46 188.7 135 71.9
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 3.3e-42 175.3 137 67.9
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 4.2e-42 174.9 135 67.4
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 6.1e-41 171.0 135 67.4
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 1.5e-39 166.4 132 66.7
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 2.0e-39 166.0 135 65.2
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 9.8e-39 163.7 133 65.4
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 4.9e-38 161.4 134 60.4
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 8.3e-38 160.6 134 61.9
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 5.4e-37 157.9 135 60.0
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 2.0e-36 156.0 135 61.5
Carub.0007s3748 Capsella rubella HOM05D007540 ORTHO05D009531 3.5e-36 155.2 135 60.7
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 1.0e-35 153.7 135 59.3
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 2.9e-35 152.1 135 60.0
A03p36900 Brassica napus HOM05D007540 ORTHO05D009531 1.1e-34 150.2 136 59.6
BraA03t12853Z Brassica rapa HOM05D007540 ORTHO05D009531 1.1e-34 150.2 136 59.6
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 1.5e-34 149.8 134 58.2
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 1.5e-34 149.8 135 58.5
Carub.0003s3275 Capsella rubella HOM05D007540 ORTHO05D009531 2.5e-34 149.1 135 55.6
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 3.3e-34 148.7 134 59.7
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 3.3e-34 148.7 136 59.6
CARHR085710 Cardamine hirsuta HOM05D007540 ORTHO05D009531 4.3e-34 148.3 136 61.0
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 9.5e-34 147.1 136 58.1
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.6e-33 146.4 135 57.8
Carub.0007s3754 Capsella rubella HOM05D007540 ORTHO05D009531 1.6e-33 146.4 134 57.5
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 2.1e-33 146.0 136 59.6
Carub.0002s0833 Capsella rubella HOM05D007540 ORTHO05D009531 2.1e-33 146.0 134 56.7
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 2.8e-33 145.6 135 58.5
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 6.2e-33 144.4 137 58.4
C03p44700 Brassica napus HOM05D007540 ORTHO05D009531 5.2e-32 141.4 137 58.4
BolC3t16732H Brassica oleracea HOM05D007540 ORTHO05D009531 5.2e-32 141.4 137 58.4
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 5.2e-32 141.4 135 57.0
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 6.8e-32 141.0 138 60.9
Carub.0001s2385 Capsella rubella HOM05D007540 ORTHO05D009531 6.8e-32 141.0 142 59.2
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 1.5e-31 139.8 138 60.1
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.8e-31 137.9 135 57.0
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.8e-31 137.9 135 57.0
AT2G15010 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 7.5e-31 137.5 134 55.2
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.8e-31 137.1 135 57.0
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.2e-30 136.0 139 58.3
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.9e-30 135.6 135 57.0
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 3.7e-30 135.2 137 58.4
CARHR085180 Cardamine hirsuta HOM05D007540 ORTHO05D009531 3.7e-30 135.2 137 53.3
Carub.0001s2384 Capsella rubella HOM05D007540 ORTHO05D009531 8.3e-30 134.0 142 56.3
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 1.4e-29 133.3 132 57.6
AL3G46810 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 2.4e-29 132.5 136 52.9
BcaC01g04144 Brassica carinata HOM05D007540 ORTHO05D009531 2.4e-29 132.5 124 57.3
AT1G72260 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 3.2e-29 132.1 124 57.3
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 9.2e-29 130.6 132 56.1
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 1.2e-28 130.2 136 54.4
BcaB01g02415 Brassica carinata HOM05D007540 ORTHO05D009531 1.2e-28 130.2 102 68.6
CARHR057950 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.2e-28 130.2 134 53.7
SalBow8G0994 Salvia bowleyana HOM05D007540 ORTHO05D009531 6.0e-28 127.9 135 53.3
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 1.7e-27 126.3 137 56.2
CANSAT25G0386 Cannabis sativa HOM05D007540 ORTHO05D009531 1.7e-27 126.3 132 55.3
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 3.0e-27 125.6 132 55.3
Carub.0007s0910 Capsella rubella HOM05D007540 ORTHO05D009531 3.0e-27 125.6 141 53.2
Thhalv10002936m.g Eutrema salsugineum HOM05D007540 ORTHO05D009531 3.0e-27 125.6 116 58.6
SalBow4G2623 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.0e-27 124.8 135 52.6
CARHR180400 Cardamine hirsuta HOM05D007540 ORTHO05D009531 9.5e-26 120.6 105 59.0
SalBow1G7590 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.3e-24 115.9 128 50.8
Aqoxy4G00585 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.5e-23 113.2 108 55.6
CANSAT25G3303 Cannabis sativa HOM05D007540 ORTHO05D009531 3.7e-22 108.6 125 49.6
CARHR180370 Cardamine hirsuta HOM05D007540 ORTHO05D009531 9.2e-21 104.0 82 65.9
SalBow5G5034 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.7e-20 102.4 102 54.9
CARHR180470 Cardamine hirsuta HOM05D007540 ORTHO05D009531 7.8e-20 100.9 82 59.8
Aqoxy4G01164 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 6.6e-19 97.8 150 44.0
Carub.0007s3752 Capsella rubella HOM05D007540 ORTHO05D009531 1.1e-18 97.1 135 45.9
CARHR292600 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.1e-18 97.1 86 60.5
Carub.0002s0647 Capsella rubella HOM05D007540 ORTHO05D009531 1.9e-18 96.3 88 56.8
C02p23290 Brassica napus HOM05D007540 ORTHO05D009531 1.2e-17 93.6 125 49.6
PSO732G0493 Papaver somniferum HOM05D007540 ORTHO05D009531 3.1e-16 89.0 147 38.1
PSO828G0001 Papaver somniferum HOM05D007540 ORTHO05D009531 3.1e-16 89.0 147 38.1
Os06g0514100 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 8.9e-16 87.4 139 41.0
Os06g0517700 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 4.1e-13 78.6 125 38.4
Carub.0007s3753 Capsella rubella HOM05D007540 ORTHO05D009531 4.6e-12 75.1 75 52.0
Os06g0509900 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 1.0e-11 73.9 123 37.4
PSO675G6065 Papaver somniferum HOM05D007540 ORTHO05D009531 1.0e-11 73.9 134 35.8
PSO675G6877 Papaver somniferum HOM05D007540 ORTHO05D009531 1.0e-11 73.9 134 35.8
PSO229G0110 Papaver somniferum HOM05D007540 ORTHO05D009531 2.3e-11 72.8 140 37.9
Carub.0007s3757 Capsella rubella HOM05D007540 ORTHO05D009531 3.3e-10 68.9 88 47.7
PSO732G0153 Papaver somniferum HOM05D007540 ORTHO05D009531 4.3e-10 68.6 149 33.6
PSO229G0059 Papaver somniferum HOM05D007540 ORTHO05D009531 5.6e-10 68.2 138 34.8
Aqoxy4G00580 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 7.3e-10 67.8 57 63.2
Aqoxy4G00581 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 7.3e-10 67.8 55 63.6
AL3G46820 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 8.1e-09 64.3 80 48.8
PSO732G0334 Papaver somniferum HOM05D007540 ORTHO05D009531 1.8e-08 63.2 142 37.3
BcaB01g02552 Brassica carinata HOM05D007540 ORTHO05D009531 4.0e-08 62.0 36 77.8
BcaC03g14860 Brassica carinata HOM05D007540 ORTHO05D009531 1.3e-06 57.0 57 57.9


User provided reference genes

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