Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 2.3e-72 275.4 134 100.0
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 4.4e-71 271.2 134 98.5
BcaB01g04013 Brassica carinata HOM05D007540 ORTHO05D009531 9.7e-71 270.0 134 97.8
BcaB01g04014 Brassica carinata HOM05D007540 ORTHO05D009531 9.7e-71 270.0 134 97.8
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 9.7e-71 270.0 137 97.8
BcaB01g04017 Brassica carinata HOM05D007540 ORTHO05D009531 9.7e-71 270.0 134 97.8
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 1.5e-47 193.0 135 74.1
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 2.6e-47 192.2 136 75.7
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 1.7e-43 179.5 137 70.1
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 2.3e-43 179.1 135 69.6
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 3.3e-42 175.3 135 69.6
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 6.1e-41 171.0 132 68.9
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 1.0e-40 170.2 135 67.4
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 5.2e-40 167.9 133 67.7
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 2.6e-39 165.6 134 62.7
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 4.4e-39 164.9 134 64.2
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 6.4e-38 161.0 135 61.5
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 2.4e-37 159.1 135 63.0
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-36 156.8 135 60.7
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 3.5e-36 155.2 135 61.5
Carub.0007s3748 Capsella rubella HOM05D007540 ORTHO05D009531 7.8e-36 154.1 135 60.7
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 1.7e-35 152.9 134 59.7
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 1.7e-35 152.9 135 60.0
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 1.7e-35 152.9 136 61.8
CARHR085710 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.3e-35 152.5 136 63.2
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 5.0e-35 151.4 134 61.2
Carub.0003s3275 Capsella rubella HOM05D007540 ORTHO05D009531 5.0e-35 151.4 135 57.0
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 8.6e-35 150.6 135 60.0
A03p36900 Brassica napus HOM05D007540 ORTHO05D009531 8.6e-35 150.6 136 60.3
BraA03t12853Z Brassica rapa HOM05D007540 ORTHO05D009531 8.6e-35 150.6 136 60.3
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 1.1e-34 150.2 136 61.8
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 3.3e-34 148.7 135 60.0
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 1.6e-33 146.4 136 58.1
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 2.8e-33 145.6 138 63.0
Carub.0001s2385 Capsella rubella HOM05D007540 ORTHO05D009531 3.6e-33 145.2 142 61.3
Carub.0007s3754 Capsella rubella HOM05D007540 ORTHO05D009531 3.6e-33 145.2 134 57.5
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 3.6e-33 145.2 137 59.9
Carub.0002s0833 Capsella rubella HOM05D007540 ORTHO05D009531 4.7e-33 144.8 134 56.7
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 6.2e-33 144.4 138 62.3
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 6.2e-33 144.4 135 58.5
AT2G15010 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 3.1e-32 142.1 134 57.5
C03p44700 Brassica napus HOM05D007540 ORTHO05D009531 4.0e-32 141.7 137 59.1
BolC3t16732H Brassica oleracea HOM05D007540 ORTHO05D009531 4.0e-32 141.7 137 59.1
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.2e-32 141.4 135 58.5
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.2e-32 141.4 135 58.5
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 8.9e-32 140.6 135 58.5
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.2e-31 140.2 139 60.4
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.6e-31 139.0 135 58.5
CARHR085180 Cardamine hirsuta HOM05D007540 ORTHO05D009531 3.4e-31 138.7 137 54.7
Carub.0001s2384 Capsella rubella HOM05D007540 ORTHO05D009531 4.4e-31 138.3 142 58.5
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 4.4e-31 138.3 137 59.9
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 5.8e-31 137.9 132 59.8
AT1G72260 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.3e-30 136.7 124 59.7
AL3G46810 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 2.2e-30 136.0 136 54.4
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 3.7e-30 135.2 132 58.3
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 6.4e-30 134.4 136 56.6
BcaC01g04144 Brassica carinata HOM05D007540 ORTHO05D009531 1.4e-29 133.3 124 58.1
BcaB01g02415 Brassica carinata HOM05D007540 ORTHO05D009531 1.9e-29 132.9 102 70.6
CANSAT25G0386 Cannabis sativa HOM05D007540 ORTHO05D009531 7.0e-29 131.0 132 57.6
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 9.2e-29 130.6 137 58.4
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 1.2e-28 130.2 132 57.6
Carub.0007s0910 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-28 130.2 141 55.3
CARHR057950 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.2e-28 130.2 134 54.5
SalBow8G0994 Salvia bowleyana HOM05D007540 ORTHO05D009531 3.5e-28 128.6 135 54.8
SalBow4G2623 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.0e-27 124.8 135 53.3
Thhalv10002936m.g Eutrema salsugineum HOM05D007540 ORTHO05D009531 6.6e-27 124.4 116 58.6
CARHR180400 Cardamine hirsuta HOM05D007540 ORTHO05D009531 8.6e-27 124.0 111 58.6
SalBow1G7590 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.8e-25 119.0 128 52.3
Aqoxy4G00585 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 2.3e-24 115.9 108 57.4
CANSAT25G3303 Cannabis sativa HOM05D007540 ORTHO05D009531 1.5e-23 113.2 125 52.0
CARHR180370 Cardamine hirsuta HOM05D007540 ORTHO05D009531 8.3e-22 107.5 82 68.3
CARHR180470 Cardamine hirsuta HOM05D007540 ORTHO05D009531 7.1e-21 104.4 82 62.2
SalBow5G5034 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.2e-21 104.0 102 55.9
Aqoxy4G01164 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.0e-19 100.5 150 45.3
CARHR292600 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.3e-19 99.4 86 61.6
C02p23290 Brassica napus HOM05D007540 ORTHO05D009531 1.9e-18 96.3 125 51.2
Carub.0002s0647 Capsella rubella HOM05D007540 ORTHO05D009531 2.5e-18 95.9 88 56.8
Carub.0007s3752 Capsella rubella HOM05D007540 ORTHO05D009531 3.3e-18 95.5 135 45.9
Os06g0514100 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 1.4e-16 90.1 139 42.4
PSO732G0493 Papaver somniferum HOM05D007540 ORTHO05D009531 2.3e-16 89.4 147 38.8
PSO828G0001 Papaver somniferum HOM05D007540 ORTHO05D009531 2.3e-16 89.4 147 38.8
PSO675G0451 Papaver somniferum HOM05D007540 ORTHO05D009531 3.2e-13 79.0 134 38.1
Os06g0517700 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 1.2e-12 77.0 125 38.4
Os06g0509900 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 2.1e-12 76.3 124 38.7
Carub.0007s3753 Capsella rubella HOM05D007540 ORTHO05D009531 2.7e-12 75.9 75 53.3
PSO732G0564 Papaver somniferum HOM05D007540 ORTHO05D009531 6.0e-12 74.7 144 37.5
PSO675G6065 Papaver somniferum HOM05D007540 ORTHO05D009531 7.8e-12 74.3 134 36.6
PSO675G6877 Papaver somniferum HOM05D007540 ORTHO05D009531 7.8e-12 74.3 134 36.6
PSO732G0153 Papaver somniferum HOM05D007540 ORTHO05D009531 2.3e-11 72.8 117 37.6
Aqoxy4G00581 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 5.1e-11 71.6 55 67.3
PSO229G0110 Papaver somniferum HOM05D007540 ORTHO05D009531 5.1e-11 71.6 140 37.9
Aqoxy4G00580 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 6.6e-11 71.2 57 66.7
Carub.0007s3757 Capsella rubella HOM05D007540 ORTHO05D009531 1.1e-10 70.5 88 48.9
PSO229G0059 Papaver somniferum HOM05D007540 ORTHO05D009531 1.2e-09 67.0 138 34.8
AL3G46820 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 4.7e-09 65.1 80 50.0
PSO732G0334 Papaver somniferum HOM05D007540 ORTHO05D009531 8.1e-09 64.3 142 38.0
BcaB01g02552 Brassica carinata HOM05D007540 ORTHO05D009531 1.4e-08 63.5 36 80.6
BcaC03g14860 Brassica carinata HOM05D007540 ORTHO05D009531 1.2e-07 60.5 57 61.4


User provided reference genes

Program Settings