Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03992 Brassica carinata HOM05D000051 ORTHO05D000015 2.5e-86 322.0 157 100.0
C03p15390 Brassica napus HOM05D000051 ORTHO05D000015 7.9e-40 167.5 136 69.9
BraA03t10628Z Brassica rapa HOM05D000051 ORTHO05D000015 7.9e-40 167.5 136 69.9
A03p15890 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-38 163.7 128 68.8
BraA03t10879Z Brassica rapa HOM05D000051 ORTHO05D000015 1.1e-38 163.7 128 68.8
A03p13190 Brassica napus HOM05D000051 ORTHO05D000015 8.2e-37 157.5 131 67.9
BraA03t10629Z Brassica rapa HOM05D000051 ORTHO05D000015 2.4e-36 156.0 131 67.2
BraA03t10878Z Brassica rapa HOM05D000051 ORTHO05D000015 7.0e-36 154.5 128 65.6
BolC3t14256H Brassica oleracea HOM05D000051 ORTHO05D000015 1.6e-35 153.3 126 66.7
A03p15880 Brassica napus HOM05D000051 ORTHO05D000015 3.5e-35 152.1 135 63.0
AL8G32670 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.3e-30 135.6 131 61.8
C03p18640 Brassica napus HOM05D000051 ORTHO05D000015 5.7e-30 134.8 108 68.5
AT5G56810 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.8e-28 129.8 131 60.3
Carub.0008s1728 Capsella rubella HOM05D000051 ORTHO05D000015 4.5e-27 125.2 132 60.6
Carub.0007s3646 Capsella rubella HOM05D000051 ORTHO05D000015 1.5e-22 110.2 131 53.4
AL8G32680 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-18 96.7 127 49.6
AT5G56820 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.5e-17 91.7 160 45.0
CARHR270570 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.0e-15 87.4 120 45.8
Thhalv10015738m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.9e-13 78.6 135 39.3
BraA10t43504Z Brassica rapa HOM05D000051 ORTHO05D020086 2.0e-11 73.2 123 43.9
Thhalv10016035m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-09 67.4 130 40.0
A03p13180 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-09 67.0 127 41.7
A02p08930 Brassica napus HOM05D000051 ORTHO05D000015 4.7e-08 62.0 127 39.4
Thhalv10013652m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.4e-07 60.5 137 38.0
THA.LOC104811717 Tarenaya hassleriana HOM05D000051 ORTHO05D000015 6.8e-07 58.2 123 37.4
Carub.0008s1667 Capsella rubella HOM05D000051 ORTHO05D000015 2.6e-06 56.2 126 38.9
C03p18610 Brassica napus HOM05D000051 ORTHO05D000015 3.4e-06 55.8 132 40.9
BolC3t14255H Brassica oleracea HOM05D000051 ORTHO05D000015 3.4e-06 55.8 132 40.9
CARHR269900 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.4e-06 55.8 150 34.7
Thhalv10015962m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.4e-06 55.8 122 36.1
AT5G56420 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.8e-06 55.1 124 36.3
Thhalv10027130m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.8e-06 54.3 65 47.7


User provided reference genes

Program Settings