Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03966 Brassica carinata HOM05D009335 ORTHO05D012740 4.7e-24 115.5 54 100.0
A03p18250 Brassica napus HOM05D009335 ORTHO05D012740 9.2e-20 101.3 55 90.9
BraA03t11085Z Brassica rapa HOM05D009335 ORTHO05D012740 2.7e-19 99.8 55 89.1
BcaC01g05897 Brassica carinata HOM05D009335 ORTHO05D012740 4.6e-19 99.0 55 89.1
C03p21300 Brassica napus HOM05D009335 ORTHO05D012740 4.6e-19 99.0 55 89.1
BolC3t14512H Brassica oleracea HOM05D009335 ORTHO05D012740 4.6e-19 99.0 55 89.1
BcaB02g10490 Brassica carinata HOM05D009335 ORTHO05D012740 2.5e-17 93.2 60 75.0
BcaC02g11351 Brassica carinata HOM05D009335 ORTHO05D012740 7.3e-17 91.7 58 77.6
C04p16970 Brassica napus HOM05D009335 ORTHO05D012740 7.3e-17 91.7 58 77.6
A04p25230 Brassica napus HOM05D009335 ORTHO05D012740 1.1e-15 87.8 67 67.2
BraA04t18024Z Brassica rapa HOM05D009335 ORTHO05D012740 2.4e-15 86.7 67 65.7
BcaC02g07893 Brassica carinata HOM05D009335 ORTHO05D012740 5.2e-15 85.5 67 65.7
BolC4t27702H Brassica oleracea HOM05D009335 ORTHO05D012740 5.2e-15 85.5 67 65.7
Carub.0004s1405 Capsella rubella HOM05D009335 ORTHO05D012740 1.1e-12 77.8 72 59.7
CARHR126580 Cardamine hirsuta HOM05D009335 ORTHO05D012740 1.1e-12 77.8 65 61.5
AT2G32690 Arabidopsis thaliana HOM05D009335 ORTHO05D012740 3.2e-12 76.3 65 61.5
AL4G28130 Arabidopsis lyrata HOM05D009335 ORTHO05D012740 4.2e-12 75.9 65 61.5
Sp4g15030 Schrenkiella parvula HOM05D009335 ORTHO05D012740 1.3e-10 70.9 40 80.0
THA.LOC104801041 Tarenaya hassleriana HOM05D009335 ORTHO05D012740 1.3e-10 70.9 60 61.7
Aa31LG5G4340 Aethionema arabicum HOM05D009335 ORTHO05D012740 1.1e-09 67.8 61 60.7
CARHR004190 Cardamine hirsuta HOM05D009335 ORTHO05D015386 2.8e-08 63.2 60 55.0
A10p03230 Brassica napus HOM05D009335 ORTHO05D015386 2.6e-06 56.6 63 50.8
BcaB02g06901 Brassica carinata HOM05D009335 ORTHO05D015386 9.9e-06 54.7 63 52.4


User provided reference genes

Program Settings