Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03919 Brassica carinata HOM05D000249 ORTHO05D016802 7.0e-115 417.2 191 100.0
A03p18900 Brassica napus HOM05D000249 ORTHO05D016802 4.1e-91 338.2 197 84.3
BolC3t14575H Brassica oleracea HOM05D000249 ORTHO05D016802 7.1e-91 337.4 198 83.8
BraA03t11149Z Brassica rapa HOM05D000249 ORTHO05D016802 1.6e-90 336.3 197 83.8
C03p22030 Brassica napus HOM05D000249 ORTHO05D016802 7.8e-90 334.0 198 83.3
BolC3t14586H Brassica oleracea HOM05D000249 ORTHO05D016802 3.6e-63 245.4 155 77.4
Thhalv10003343m.g Eutrema salsugineum HOM05D000249 ORTHO05D016802 2.1e-50 203.0 182 59.9
Thhalv10000490m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.8e-46 189.9 198 51.0
Sp6g05040 Schrenkiella parvula HOM05D000249 ORTHO05D016802 8.5e-28 127.9 82 75.6
Sp6g05050 Schrenkiella parvula HOM05D000249 ORTHO05D016802 7.2e-27 124.8 114 56.1
Thhalv10005688m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 5.3e-22 108.6 164 37.8
AL7G12760 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.9e-21 105.1 159 37.7
AL7G12790 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.9e-21 105.1 194 36.6
AL7G13600 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.7e-21 104.8 158 41.1
BraA03t15259Z Brassica rapa HOM05D000249 ORTHO05D032890 1.3e-20 104.0 146 38.4
Thhalv10004132m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.2e-20 103.2 160 40.6
A03p62220 Brassica napus HOM05D000249 ORTHO05D032890 5.0e-20 102.1 151 37.1
Carub.0008s0622 Capsella rubella HOM05D000249 ORTHO05D000206 5.0e-20 102.1 158 40.5
Thhalv10005562m.g Eutrema salsugineum HOM05D000249 ORTHO05D024610 3.2e-19 99.4 174 35.6
Thhalv10022697m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.2e-18 97.4 144 36.1
Thhalv10026874m.g Eutrema salsugineum HOM05D000249 ORTHO05D014429 3.0e-17 92.8 200 32.0
AL7G14140 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 8.8e-17 91.3 198 35.4
Thhalv10025324m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 8.8e-17 91.3 149 36.2
C01p08810 Brassica napus HOM05D000249 ORTHO05D000206 1.5e-16 90.5 193 31.6
BolC1t00871H Brassica oleracea HOM05D000249 ORTHO05D000206 1.5e-16 90.5 193 31.6
BcaNung04321 Brassica carinata HOM05D000249 ORTHO05D032890 2.0e-16 90.1 165 34.5
Carub.0008s0634 Capsella rubella HOM05D000249 ORTHO05D000206 3.7e-15 85.9 198 34.3
Sp7g31430 Schrenkiella parvula HOM05D000249 ORTHO05D000206 3.7e-15 85.9 146 36.3
Carub.0007s0348 Capsella rubella HOM05D000249 ORTHO05D000206 4.8e-15 85.5 196 35.7
BcaC07g38169 Brassica carinata HOM05D000249 ORTHO05D024041 5.3e-14 82.0 142 34.5
Aa31LG6G15360 Aethionema arabicum HOM05D000249 ORTHO05D000206 7.0e-14 81.6 191 30.9
BcaC05g25412 Brassica carinata HOM05D000249 ORTHO05D014429 7.0e-14 81.6 170 32.9
C05p12880 Brassica napus HOM05D000249 ORTHO05D014429 7.0e-14 81.6 170 32.9
BolC5t30035H Brassica oleracea HOM05D000249 ORTHO05D014429 7.0e-14 81.6 170 32.9
BolC7t41748H Brassica oleracea HOM05D000249 ORTHO05D000206 7.0e-14 81.6 145 35.9
C02p09060 Brassica napus HOM05D000249 ORTHO05D000206 2.7e-13 79.7 145 35.9
BolC2t08508H Brassica oleracea HOM05D000249 ORTHO05D000206 2.7e-13 79.7 180 30.6
CARHR246290 Cardamine hirsuta HOM05D000249 ORTHO05D000206 2.7e-13 79.7 169 33.7
BcaC05g25141 Brassica carinata HOM05D000249 ORTHO05D014429 3.5e-13 79.3 167 32.3
A02p14670 Brassica napus HOM05D000249 ORTHO05D000206 3.5e-13 79.3 160 31.2
C07p12690 Brassica napus HOM05D000249 ORTHO05D000206 3.5e-13 79.3 145 35.2
BolC5t29779H Brassica oleracea HOM05D000249 ORTHO05D014429 3.5e-13 79.3 167 32.3
BolC8t48591H Brassica oleracea HOM05D000249 ORTHO05D024041 3.5e-13 79.3 142 34.5
BraA02t06534Z Brassica rapa HOM05D000249 ORTHO05D000206 3.5e-13 79.3 160 31.2
A08p30690 Brassica napus HOM05D000249 ORTHO05D000206 7.7e-13 78.2 202 31.2
BcaC03g14901 Brassica carinata HOM05D000249 ORTHO05D024041 1.0e-12 77.8 182 30.2
BcaC05g25104 Brassica carinata HOM05D000249 ORTHO05D014429 1.0e-12 77.8 161 34.8
C02p23780 Brassica napus HOM05D000249 ORTHO05D000206 1.0e-12 77.8 182 30.2
AL7G30180 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.3e-12 77.4 157 35.0
BraA08t34999Z Brassica rapa HOM05D000249 ORTHO05D000206 1.3e-12 77.4 202 31.2
Thhalv10029221m.g Eutrema salsugineum HOM05D000249 ORTHO05D017420 1.7e-12 77.0 160 36.2
Thhalv10006011m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.2e-12 76.6 201 34.8
Thhalv10027306m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.2e-12 76.6 197 34.5
C05p10330 Brassica napus HOM05D000249 ORTHO05D014429 2.9e-12 76.3 168 32.1
Carub.0011s0005 Capsella rubella HOM05D000249 ORTHO05D000206 2.9e-12 76.3 168 35.1
BraA06t24071Z Brassica rapa HOM05D000249 ORTHO05D014429 3.8e-12 75.9 162 33.3
AL7G33450 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.0e-12 75.5 144 37.5
Carub.0007s0234 Capsella rubella HOM05D000249 ORTHO05D000206 1.5e-11 73.9 150 34.7
BolC7t46516H Brassica oleracea HOM05D000249 ORTHO05D024610 1.9e-11 73.6 131 37.4
BolC9t57497H Brassica oleracea HOM05D000249 ORTHO05D000206 3.2e-11 72.8 197 33.5
A08p21350 Brassica napus HOM05D000249 ORTHO05D024041 4.2e-11 72.4 144 34.0
A10p31990 Brassica napus HOM05D000249 ORTHO05D000206 4.2e-11 72.4 152 36.2
BolC5t29192H Brassica oleracea HOM05D000249 ORTHO05D000206 4.2e-11 72.4 146 33.6
BraA10t45243Z Brassica rapa HOM05D000249 ORTHO05D000206 4.2e-11 72.4 152 36.2
AL2G28170 Arabidopsis lyrata HOM05D000249 ORTHO05D017420 7.2e-11 71.6 174 32.8
C05p04170 Brassica napus HOM05D000249 ORTHO05D000206 7.2e-11 71.6 146 33.6
C06p44240 Brassica napus HOM05D000249 ORTHO05D017420 7.2e-11 71.6 152 34.9
C09p46320 Brassica napus HOM05D000249 ORTHO05D000206 7.2e-11 71.6 199 32.2
AT2G14288 Arabidopsis thaliana HOM05D000249 ORTHO05D014429 9.4e-11 71.2 184 33.2
BcaC08g46481 Brassica carinata HOM05D000249 ORTHO05D017420 1.2e-10 70.9 151 34.4
BcaC05g29035 Brassica carinata HOM05D000249 ORTHO05D000206 1.6e-10 70.5 158 33.5
BolC5t33930H Brassica oleracea HOM05D000249 ORTHO05D000206 1.6e-10 70.5 158 33.5
C07p60890 Brassica napus HOM05D000249 ORTHO05D024610 2.7e-10 69.7 111 37.8
AL7G13810 Arabidopsis lyrata HOM05D000249 ORTHO05D015901 3.6e-10 69.3 132 37.1
BcaC09g51808 Brassica carinata HOM05D000249 ORTHO05D015901 3.6e-10 69.3 113 38.1
A03p58680 Brassica napus HOM05D000249 ORTHO05D033784 4.7e-10 68.9 140 32.1
BraA10t43371Z Brassica rapa HOM05D000249 ORTHO05D000206 4.7e-10 68.9 176 31.2
BcaB03g13949 Brassica carinata HOM05D000249 ORTHO05D000206 6.1e-10 68.6 158 31.6
CARHR210870 Cardamine hirsuta HOM05D000249 ORTHO05D000206 8.0e-10 68.2 170 31.2
BcaC06g32117 Brassica carinata HOM05D000249 ORTHO05D000206 1.0e-09 67.8 158 32.9
C09p72710 Brassica napus HOM05D000249 ORTHO05D000206 1.0e-09 67.8 158 32.9
Carub.0007s0183 Capsella rubella HOM05D000249 ORTHO05D000206 1.0e-09 67.8 140 31.4
AL1G54770 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.4e-09 67.4 170 30.0
CARHR113640 Cardamine hirsuta HOM05D000249 ORTHO05D024610 1.4e-09 67.4 127 37.0
BraA07t31243Z Brassica rapa HOM05D000249 ORTHO05D017420 1.8e-09 67.0 145 35.2
Thhalv10019855m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.8e-09 67.0 134 35.8
AT4G33900 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 2.3e-09 66.6 173 28.3
BcaC04g21272 Brassica carinata HOM05D000249 ORTHO05D000206 2.3e-09 66.6 123 31.7
C05p52460 Brassica napus HOM05D000249 ORTHO05D000206 2.3e-09 66.6 158 32.3
Thhalv10019497m.g Eutrema salsugineum HOM05D000249 ORTHO05D017420 2.3e-09 66.6 178 32.6
Thhalv10025580m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.3e-09 66.6 173 31.2
BcaNung00910 Brassica carinata HOM05D000249 ORTHO05D000206 3.0e-09 66.2 187 28.9
C01p00900 Brassica napus HOM05D000249 ORTHO05D000206 3.0e-09 66.2 187 28.9
BolC1t00091H Brassica oleracea HOM05D000249 ORTHO05D000206 3.0e-09 66.2 187 28.9
BolC5t34696H Brassica oleracea HOM05D000249 ORTHO05D000206 3.0e-09 66.2 158 32.3
CARHR246590 Cardamine hirsuta HOM05D000249 ORTHO05D000206 3.0e-09 66.2 181 28.2
AL7G32560 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 4.0e-09 65.9 147 34.7
AT4G36840 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 4.0e-09 65.9 162 33.3
Carub.0003s0535 Capsella rubella HOM05D000249 ORTHO05D014429 4.0e-09 65.9 166 33.1
AL7G11730 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.2e-09 65.5 204 28.9
A07p36760 Brassica napus HOM05D000249 ORTHO05D017420 8.8e-09 64.7 152 34.2
BcaNung01924 Brassica carinata HOM05D000249 ORTHO05D000206 1.2e-08 64.3 195 32.3
Thhalv10011944m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.2e-08 64.3 146 32.9
CARHR146050 Cardamine hirsuta HOM05D000249 ORTHO05D033102 1.5e-08 63.9 60 43.3
Thhalv10021905m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 4.4e-08 62.4 161 26.7
A05p34670 Brassica napus HOM05D000249 ORTHO05D000206 5.7e-08 62.0 158 31.0
BolC7t46634H Brassica oleracea HOM05D000249 ORTHO05D015901 5.7e-08 62.0 59 52.5
BraA05t22283Z Brassica rapa HOM05D000249 ORTHO05D000206 5.7e-08 62.0 158 31.0
AT3G24610 Arabidopsis thaliana HOM05D000249 ORTHO05D014429 7.5e-08 61.6 194 27.3
BraA08t34282Z Brassica rapa HOM05D000249 ORTHO05D000206 9.8e-08 61.2 137 32.1
C07p62170 Brassica napus HOM05D000249 ORTHO05D015901 2.2e-07 60.1 59 50.8
Thhalv10002293m.g Eutrema salsugineum HOM05D000249 ORTHO05D013797 3.7e-07 59.3 169 27.8
A05p34450 Brassica napus HOM05D000249 ORTHO05D000206 4.8e-07 58.9 141 31.2
BraA10t42698Z Brassica rapa HOM05D000249 ORTHO05D000206 6.3e-07 58.5 126 31.7
BcaC06g35639 Brassica carinata HOM05D000249 ORTHO05D000206 8.3e-07 58.2 57 49.1
AL7G12140 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.1e-06 57.8 141 29.1
Sp4g01030 Schrenkiella parvula HOM05D000249 ORTHO05D000206 1.8e-06 57.0 187 24.1
BcaC03g15449 Brassica carinata HOM05D000249 ORTHO05D000206 2.4e-06 56.6 150 30.7
Thhalv10027538m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.4e-06 56.6 72 44.4
AL8G15990 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.1e-06 56.2 136 27.2
THA.LOC109116437 Tarenaya hassleriana HOM05D000249 ORTHO05D000206 3.1e-06 56.2 156 28.2
BcaB04g20453 Brassica carinata HOM05D000249 ORTHO05D000206 4.1e-06 55.8 100 31.0
A08p23270 Brassica napus HOM05D000249 ORTHO05D000206 4.1e-06 55.8 137 31.4
A10p04310 Brassica napus HOM05D000249 ORTHO05D015901 4.1e-06 55.8 59 47.5
BraA05t22280Z Brassica rapa HOM05D000249 ORTHO05D000206 4.1e-06 55.8 141 29.8
AL7G11720 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.4e-06 55.5 159 27.0
AL1G59720 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.0e-06 55.1 155 27.1
A01p00440 Brassica napus HOM05D000249 ORTHO05D000206 9.1e-06 54.7 158 25.9
BraA01t00051Z Brassica rapa HOM05D000249 ORTHO05D000206 9.1e-06 54.7 158 25.9
Sp3g20980 Schrenkiella parvula HOM05D000249 ORTHO05D000206 9.1e-06 54.7 83 33.7


User provided reference genes

Program Settings