Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03883 Brassica carinata HOM05D009266 ORTHO05D011425 3.9e-35 151.0 79 100.0
BcaC01g05708 Brassica carinata HOM05D009266 ORTHO05D011425 3.8e-22 107.8 58 100.0
A03p19710 Brassica napus HOM05D009266 ORTHO05D011425 1.1e-21 106.3 58 98.3
C03p22970 Brassica napus HOM05D009266 ORTHO05D011425 1.1e-21 106.3 58 98.3
BolC3t14698H Brassica oleracea HOM05D009266 ORTHO05D011425 1.1e-21 106.3 58 98.3
BraA03t11225Z Brassica rapa HOM05D009266 ORTHO05D011425 1.1e-21 106.3 58 98.3
Sp4g18020 Schrenkiella parvula HOM05D009266 ORTHO05D011425 1.9e-18 95.5 79 73.4
A04p27230 Brassica napus HOM05D009266 ORTHO05D011425 3.6e-17 91.3 58 87.9
BraA04t18221Z Brassica rapa HOM05D009266 ORTHO05D011425 5.8e-15 84.0 59 81.4
Thhalv10017498m.g Eutrema salsugineum HOM05D009266 ORTHO05D011425 2.2e-14 82.0 79 65.8
AL4G31870 Arabidopsis lyrata HOM05D009266 ORTHO05D011425 6.0e-12 73.9 79 59.5
C04p64740 Brassica napus HOM05D009266 ORTHO05D011425 7.9e-12 73.6 52 84.6
CARHR130010 Cardamine hirsuta HOM05D009266 ORTHO05D011425 1.1e-10 69.7 79 58.2
AT2G35765 Arabidopsis thaliana HOM05D009266 ORTHO05D011425 7.4e-10 67.0 83 55.4
AL1G32250 Arabidopsis lyrata HOM05D009266 ORTHO05D011425 3.1e-08 61.6 75 50.7
A08p29780 Brassica napus HOM05D009266 ORTHO05D011425 3.1e-08 61.6 55 60.0
BraA08t34912Z Brassica rapa HOM05D009266 ORTHO05D011425 3.1e-08 61.6 55 60.0
C08p19500 Brassica napus HOM05D009266 ORTHO05D011425 5.3e-08 60.8 55 60.0
BolC8t49573H Brassica oleracea HOM05D009266 ORTHO05D011425 5.3e-08 60.8 55 60.0
BcaC02g07671 Brassica carinata HOM05D009266 ORTHO05D011425 6.9e-08 60.5 79 57.0
Carub.0004s1750 Capsella rubella HOM05D009266 ORTHO05D011425 6.9e-08 60.5 58 60.3
AT1G19500 Arabidopsis thaliana HOM05D009266 ORTHO05D011425 9.0e-08 60.1 75 53.3
BolC4t27952H Brassica oleracea HOM05D009266 ORTHO05D011425 9.0e-08 60.1 41 87.8
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 1.2e-07 59.7 55 61.8
Thhalv10009239m.g Eutrema salsugineum HOM05D009266 ORTHO05D011425 3.8e-06 54.7 55 60.0


User provided reference genes

Program Settings