Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03869 Brassica carinata HOM05D000209 ORTHO05D018688 9.3e-32 139.4 63 100.0
C03p23190 Brassica napus HOM05D000209 ORTHO05D018688 1.1e-27 125.9 63 90.5
BcaC01g05687 Brassica carinata HOM05D000209 ORTHO05D000129 1.8e-27 125.2 63 88.9
BolC3t14720H Brassica oleracea HOM05D000209 ORTHO05D018688 1.8e-27 125.2 63 88.9
BcaC01g05686 Brassica carinata HOM05D000209 ORTHO05D018688 1.9e-21 105.1 65 78.5
C03p23200 Brassica napus HOM05D000209 ORTHO05D018688 1.9e-21 105.1 65 78.5
BolC3t14721H Brassica oleracea HOM05D000209 ORTHO05D018688 1.9e-21 105.1 65 78.5
Thhalv10021918m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.5e-10 67.4 62 53.2
Sp3g21250 Schrenkiella parvula HOM05D000209 ORTHO05D000129 5.9e-10 67.0 62 51.6
Thhalv10022006m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.1e-08 62.8 60 51.7
BcaB04g20440 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-08 62.4 62 48.4
Thhalv10002939m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.2e-08 60.8 64 50.0
C03p52680 Brassica napus HOM05D000209 ORTHO05D000129 1.2e-07 59.3 61 50.8
BolC3t17536H Brassica oleracea HOM05D000209 ORTHO05D000129 1.2e-07 59.3 61 50.8
AL3G36630 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.6e-07 58.9 70 47.1
BcaC01g03428 Brassica carinata HOM05D000209 ORTHO05D000129 1.8e-06 55.5 56 51.8
AL3G37040 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.0e-06 54.7 64 45.3
Carub.0003s2655 Capsella rubella HOM05D000209 ORTHO05D000129 3.9e-06 54.3 62 51.6
BcaB03g14653 Brassica carinata HOM05D000209 ORTHO05D000129 5.1e-06 53.9 61 49.2


User provided reference genes

Program Settings