Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03773 Brassica carinata HOM05D008508 ORTHO05D003325 1.1e-96 356.7 192 100.0
BcaC01g05613 Brassica carinata HOM05D008508 ORTHO05D003325 6.9e-70 267.7 193 81.9
C03p24300 Brassica napus HOM05D008508 ORTHO05D003325 6.9e-70 267.7 193 81.9
BolC3t14826H Brassica oleracea HOM05D008508 ORTHO05D003325 6.9e-70 267.7 193 81.9
A03p20680 Brassica napus HOM05D008508 ORTHO05D003325 5.8e-69 264.6 192 79.2
BraA03t11309Z Brassica rapa HOM05D008508 ORTHO05D003325 5.8e-69 264.6 192 79.2
Sp4g19810 Schrenkiella parvula HOM05D008508 ORTHO05D003325 6.5e-68 261.2 195 77.9
AT2G37480 Arabidopsis thaliana HOM05D008508 ORTHO05D003325 2.9e-60 235.7 199 71.4
AL4G33980 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 2.1e-58 229.6 199 69.8
AL4G33940 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 6.1e-58 228.0 197 70.1
BcaB02g09283 Brassica carinata HOM05D008508 ORTHO05D003325 1.1e-56 223.8 205 70.2
BolC4t28099H Brassica oleracea HOM05D008508 ORTHO05D003325 4.3e-56 221.9 197 71.6
Thhalv10017918m.g Eutrema salsugineum HOM05D008508 ORTHO05D003325 4.8e-55 218.4 195 69.7
Carub.0004s1941 Capsella rubella HOM05D008508 ORTHO05D003325 4.1e-54 215.3 199 66.3
C04p65950 Brassica napus HOM05D008508 ORTHO05D003325 5.3e-54 214.9 197 69.5
C04p10560 Brassica napus HOM05D008508 ORTHO05D003325 2.6e-53 212.6 198 68.7
BcaC02g11856 Brassica carinata HOM05D008508 ORTHO05D003325 7.7e-53 211.1 198 68.2
BcaB06g28998 Brassica carinata HOM05D008508 ORTHO05D003325 8.5e-52 207.6 161 72.7
BraA05t19816Z Brassica rapa HOM05D008508 ORTHO05D003325 3.2e-51 205.7 199 68.3
BolC4t22647H Brassica oleracea HOM05D008508 ORTHO05D003325 7.2e-51 204.5 204 66.2
A05p08470 Brassica napus HOM05D008508 ORTHO05D003325 3.9e-49 198.7 199 66.8
Aa31LG5G22930 Aethionema arabicum HOM05D008508 ORTHO05D003325 5.1e-49 198.4 203 63.1
BraA04t18340Z Brassica rapa HOM05D008508 ORTHO05D003325 1.1e-48 197.2 199 65.3
Aa31LG10G9300 Aethionema arabicum HOM05D008508 ORTHO05D003325 1.8e-46 189.9 201 59.2
A04p28630 Brassica napus HOM05D008508 ORTHO05D003325 1.8e-46 189.9 198 64.6
AL5G34640 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 1.2e-42 177.2 210 56.2
AT3G53670 Arabidopsis thaliana HOM05D008508 ORTHO05D003325 1.8e-38 163.3 206 53.4
Thhalv10010719m.g Eutrema salsugineum HOM05D008508 ORTHO05D003325 9.1e-38 161.0 213 50.7
THA.LOC104805432 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 1.6e-37 160.2 211 54.5
Sp5g08700 Schrenkiella parvula HOM05D008508 ORTHO05D003325 8.5e-36 154.5 213 50.7
BraA09t40129Z Brassica rapa HOM05D008508 ORTHO05D003325 1.2e-34 150.6 210 51.9
Carub.0005s2025 Capsella rubella HOM05D008508 ORTHO05D003325 2.3e-33 146.4 209 50.2
A09p46660 Brassica napus HOM05D008508 ORTHO05D003325 2.0e-32 143.3 212 50.5
BcaB01g00256 Brassica carinata HOM05D008508 ORTHO05D003325 3.3e-32 142.5 207 50.2
BolC8t50501H Brassica oleracea HOM05D008508 ORTHO05D003325 9.7e-32 141.0 213 48.4
BcaC07g39726 Brassica carinata HOM05D008508 ORTHO05D003325 6.3e-31 138.3 217 47.9
C08p28980 Brassica napus HOM05D008508 ORTHO05D003325 6.3e-31 138.3 217 47.9
CARHR132120 Cardamine hirsuta HOM05D008508 ORTHO05D003325 1.6e-29 133.7 110 73.6
BraA07t29860Z Brassica rapa HOM05D008508 ORTHO05D003325 2.7e-29 132.9 209 49.3
BcaB02g07768 Brassica carinata HOM05D008508 ORTHO05D003325 4.0e-25 119.0 206 46.6
A07p21780 Brassica napus HOM05D008508 ORTHO05D003325 6.8e-25 118.2 206 47.1
THA.LOC104806576 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 3.7e-23 112.5 150 52.0
BolC6t37349H Brassica oleracea HOM05D008508 ORTHO05D003325 1.4e-22 110.5 205 44.4
CARHR132130 Cardamine hirsuta HOM05D008508 ORTHO05D003325 3.1e-22 109.4 88 70.5
CARHR163580 Cardamine hirsuta HOM05D008508 ORTHO05D003325 8.6e-20 101.3 253 36.4
C06p21610 Brassica napus HOM05D008508 ORTHO05D003325 3.3e-19 99.4 206 42.2
BcaC08g44645 Brassica carinata HOM05D008508 ORTHO05D003325 2.1e-18 96.7 206 41.7
THA.LOC104824529 Tarenaya hassleriana HOM05D008508 ORTHO05D003325 2.0e-16 90.1 107 47.7
BcaC02g07532 Brassica carinata HOM05D008508 ORTHO05D003325 2.4e-14 83.2 77 67.5
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 4.5e-13 79.0 88 59.1
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 2.5e-11 73.2 88 52.3
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 2.5e-11 73.2 126 42.9
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 2.5e-11 73.2 88 52.3
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 4.3e-11 72.4 126 42.1
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 5.6e-11 72.0 126 42.1
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 1.6e-10 70.5 85 57.6
BcaB01g00255 Brassica carinata HOM05D008508 ORTHO05D003325 5.2e-09 65.5 88 53.4
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 1.5e-08 63.9 171 35.1
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 4.4e-08 62.4 162 36.4
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 5.8e-08 62.0 120 42.5
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 5.8e-08 62.0 172 34.9
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 7.5e-08 61.6 67 52.2
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 1.3e-07 60.8 108 44.4
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 2.2e-07 60.1 117 41.9
AL5G37360 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 4.9e-07 58.9 70 60.0
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 6.4e-07 58.5 147 38.1
PGR004G0289 Punica granatum HOM05D004206 ORTHO05D003325 6.4e-07 58.5 87 46.0
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 6.4e-07 58.5 83 50.6
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 6.4e-07 58.5 107 40.2
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 8.3e-07 58.2 84 44.0
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 2.4e-06 56.6 83 49.4
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 2.4e-06 56.6 81 43.2
TWI77G0356 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 2.4e-06 56.6 167 34.7
MSTRG.26756 Avicennia marina HOM05D004206 ORTHO05D003325 3.2e-06 56.2 74 47.3
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 3.2e-06 56.2 55 54.5
Cpa.g.sc11.170 Carica papaya HOM05D004206 ORTHO05D003325 3.2e-06 56.2 58 53.4
PSO648G0001 Papaver somniferum HOM05D004206 ORTHO05D003325 5.4e-06 55.5 41 56.1
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 5.4e-06 55.5 68 47.1
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 5.4e-06 55.5 127 36.2
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 7.0e-06 55.1 84 48.8
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 7.0e-06 55.1 47 57.4
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 7.0e-06 55.1 47 57.4
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 9.2e-06 54.7 82 45.1
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 9.2e-06 54.7 85 48.2


User provided reference genes

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