Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03699 Brassica carinata HOM05D001122 ORTHO05D001877 2.8e-23 111.3 65 100.0
BcaB01g03695 Brassica carinata HOM05D001122 ORTHO05D001877 1.9e-11 72.0 42 100.0
BcaC01g05545 Brassica carinata HOM05D001122 ORTHO05D001877 1.9e-11 72.0 42 100.0
C03p25110 Brassica napus HOM05D001122 ORTHO05D001877 1.9e-11 72.0 42 100.0
BolC3t14902H Brassica oleracea HOM05D001122 ORTHO05D001877 7.2e-11 70.1 42 97.6
BcaC02g07472 Brassica carinata HOM05D001122 ORTHO05D001877 9.3e-11 69.7 60 76.7
A03p21230 Brassica napus HOM05D001122 ORTHO05D001877 1.8e-09 65.5 60 73.3
BraA03t11360Z Brassica rapa HOM05D001122 ORTHO05D001877 1.8e-09 65.5 60 73.3
Thhalv10016492m.g Eutrema salsugineum HOM05D001122 ORTHO05D001877 1.1e-08 62.8 40 92.5
AL4G35590 Arabidopsis lyrata HOM05D001122 ORTHO05D001877 4.3e-08 60.8 40 87.5
Carub.0004s2034 Capsella rubella HOM05D001122 ORTHO05D001877 9.7e-08 59.7 40 87.5
Sp4g20690 Schrenkiella parvula HOM05D001122 ORTHO05D001877 9.7e-08 59.7 40 87.5
AT2G38370 Arabidopsis thaliana HOM05D001122 ORTHO05D001877 3.7e-07 57.8 60 63.3
Aa31LG5G24080 Aethionema arabicum HOM05D001122 ORTHO05D001877 1.4e-06 55.8 42 76.2
CiPaw.09G218300 Carya illinoinensis HOM05D001122 ORTHO05D001877 2.4e-06 55.1 43 72.1
THA.LOC104806079 Tarenaya hassleriana HOM05D001122 ORTHO05D001877 4.1e-06 54.3 40 77.5
Cfa017062 Carpinus fangiana HOM05D001122 ORTHO05D001877 9.0e-06 53.1 40 75.0
Haze_21139 Corylus avellana HOM05D001122 ORTHO05D001877 9.0e-06 53.1 40 75.0
Haze_21145 Corylus avellana HOM05D001122 ORTHO05D001877 9.0e-06 53.1 40 75.0
Manes.09G115600 Manihot esculenta HOM05D001122 ORTHO05D001877 9.0e-06 53.1 40 72.5
QL07p032789 Quercus lobata HOM05D001122 ORTHO05D001877 9.0e-06 53.1 40 75.0


User provided reference genes

Program Settings