Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 6.3e-138 495.4 594 100.0
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 1.6e-93 347.8 228 86.0
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 2.1e-93 347.4 557 82.0
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 2.1e-93 347.4 557 82.0
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 4.7e-93 346.3 557 85.1
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 1.9e-86 324.3 554 80.3
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 4.6e-80 303.1 223 78.9
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 5.2e-76 289.7 226 82.7
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 2.0e-75 287.7 227 75.3
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 7.1e-73 279.3 212 75.0
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 4.5e-67 260.0 231 70.1
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 3.2e-65 253.8 166 82.5
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 8.7e-63 245.7 166 79.5
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 1.1e-38 165.6 249 54.6
BolC3t14925H Brassica oleracea HOM05D006830 ORTHO05D008119 6.9e-28 129.8 103 92.2
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 1.2e-24 119.0 232 39.2
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 2.1e-24 118.2 181 48.6
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.8e-23 115.2 232 38.4
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 1.8e-23 115.2 247 38.1
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 3.0e-23 114.4 234 39.3
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 1.5e-22 112.1 252 36.9
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 3.3e-22 110.9 243 37.9
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 7.4e-22 109.8 238 37.0
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 3.7e-21 107.5 236 37.3
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 3.7e-21 107.5 237 37.1
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 4.8e-21 107.1 241 37.8
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 1.4e-20 105.5 260 34.2
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 3.1e-20 104.4 181 42.5
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 1.2e-19 102.4 251 34.7
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 1.6e-19 102.1 245 35.1
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 1.6e-19 102.1 227 37.0
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 1.6e-19 102.1 243 35.4
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 3.5e-19 100.9 254 32.7
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.5e-19 100.9 258 34.5
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 4.5e-19 100.5 256 35.5
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 7.7e-19 99.8 189 40.7
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 7.7e-19 99.8 228 35.1
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 1.0e-18 99.4 255 32.5
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 1.7e-18 98.6 174 44.3
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 2.9e-18 97.8 246 34.1
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.9e-18 97.8 246 34.1
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 5.0e-18 97.1 179 40.8
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 5.0e-18 97.1 168 42.3
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 5.0e-18 97.1 178 38.2
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 5.0e-18 97.1 228 34.2
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 6.5e-18 96.7 250 34.0
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 6.5e-18 96.7 174 43.7
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 2.5e-17 94.7 255 32.5
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 3.2e-17 94.4 174 43.1
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 4.2e-17 94.0 264 32.2
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 5.5e-17 93.6 179 41.3
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 7.2e-17 93.2 263 32.7
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 9.4e-17 92.8 173 39.9
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 1.2e-16 92.4 167 42.5
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 1.2e-16 92.4 245 32.2
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 2.1e-16 91.7 246 34.1
Aa31LG5G23390 Aethionema arabicum HOM05D006830 ORTHO05D008119 3.6e-16 90.9 106 53.8
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 6.1e-16 90.1 259 32.4
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 8.0e-16 89.7 207 35.3
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 1.4e-15 89.0 192 37.5
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 6.7e-15 86.7 256 30.9
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 6.7e-15 86.7 180 39.4
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 1.2e-14 85.9 245 32.2
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 1.5e-14 85.5 177 36.7
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 2.6e-14 84.7 177 37.9
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 7.5e-14 83.2 202 35.6
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 7.5e-14 83.2 177 37.3
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 9.7e-14 82.8 258 33.3
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 9.7e-14 82.8 197 37.1
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 1.3e-13 82.4 249 30.5
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 2.2e-13 81.6 264 31.4
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 8.2e-13 79.7 177 36.7
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 1.1e-12 79.3 201 31.3
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 1.4e-12 79.0 242 29.3
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 1.6e-11 75.5 256 31.2
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 2.0e-11 75.1 229 31.4
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 4.5e-11 73.9 259 29.3
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 4.5e-11 73.9 169 34.9
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 7.7e-11 73.2 266 29.7
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 1.7e-10 72.0 200 32.0
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 3.8e-10 70.9 257 27.6
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 5.0e-10 70.5 185 34.1
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 1.1e-09 69.3 257 30.0
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 1.9e-09 68.6 197 31.5
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 3.2e-09 67.8 272 29.0
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 3.2e-09 67.8 197 31.0
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 7.2e-09 66.6 269 27.5
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 1.2e-08 65.9 62 58.1
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 1.6e-08 65.5 180 34.4
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 2.1e-08 65.1 137 35.0
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 2.1e-08 65.1 139 34.5
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 1.0e-07 62.8 153 31.4
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 1.4e-07 62.4 272 29.0
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 5.2e-07 60.5 259 27.0
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 6.8e-07 60.1 318 27.0
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 6.8e-07 60.1 86 44.2
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 6.8e-07 60.1 169 32.5
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 2.0e-06 58.5 303 26.7
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 2.0e-06 58.5 236 29.2
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 2.6e-06 58.2 64 54.7
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 7.5e-06 56.6 85 43.5


User provided reference genes

Program Settings