Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03620 Brassica carinata HOM05D011026 ORTHO05D012737 3.8e-117 424.9 218 100.0
A03p21670 Brassica napus HOM05D011026 ORTHO05D012737 1.1e-87 327.0 234 73.9
BraA03t11402Z Brassica rapa HOM05D011026 ORTHO05D012737 3.5e-86 322.0 234 73.1
BcaC01g05516 Brassica carinata HOM05D011026 ORTHO05D012737 2.3e-85 319.3 234 72.2
C03p25650 Brassica napus HOM05D011026 ORTHO05D012737 2.3e-85 319.3 234 72.2
BolC3t14953H Brassica oleracea HOM05D011026 ORTHO05D012737 2.3e-85 319.3 234 72.2
BcaB01g03619 Brassica carinata HOM05D011026 ORTHO05D012737 2.4e-66 256.1 231 62.3
AL4G36130 Arabidopsis lyrata HOM05D011026 ORTHO05D012737 4.3e-44 182.2 238 49.6
AT2G38823 Arabidopsis thaliana HOM05D011026 ORTHO05D012737 3.7e-43 179.1 221 52.9
BolC4t28192H Brassica oleracea HOM05D002835 ORTHO05D012737 7.6e-41 171.4 224 46.9
A04p29610 Brassica napus HOM05D011026 ORTHO05D012737 1.7e-40 170.2 224 46.9
C04p66910 Brassica napus HOM05D002835 ORTHO05D012737 2.2e-40 169.9 224 46.9
BraA04t18427Z Brassica rapa HOM05D011026 ORTHO05D012737 7.9e-38 161.4 224 45.1
BcaC02g07443 Brassica carinata HOM05D011026 ORTHO05D012737 1.5e-33 147.1 231 42.4
Carub.0004s2085 Capsella rubella HOM05D011026 ORTHO05D012737 7.2e-31 138.3 240 39.6
Thhalv10017551m.g Eutrema salsugineum HOM05D011026 ORTHO05D012737 5.3e-26 122.1 253 36.8
CARHR133550 Cardamine hirsuta HOM05D011026 ORTHO05D012737 1.2e-17 94.4 103 51.5
AT3G54520 Arabidopsis thaliana HOM05D010570 ORTHO05D012789 7.5e-12 75.1 237 29.5
THA.LOC104804690 Tarenaya hassleriana HOM05D010570 ORTHO05D012789 2.8e-11 73.2 236 30.1
Aa31LG5G20850 Aethionema arabicum HOM05D011026 ORTHO05D012737 9.1e-10 68.2 99 39.4
Carub.0005s2114 Capsella rubella HOM05D010570 ORTHO05D012789 9.1e-10 68.2 237 27.8
AL5G35570 Arabidopsis lyrata HOM05D010570 ORTHO05D012789 2.0e-09 67.0 236 28.0
Carub.0005s2115 Capsella rubella HOM05D010570 ORTHO05D012789 3.8e-08 62.8 247 26.3
C08p29710 Brassica napus HOM05D010570 ORTHO05D012789 1.1e-07 61.2 188 31.4
BcaB01g00184 Brassica carinata HOM05D010570 ORTHO05D012789 3.2e-07 59.7 267 27.0


User provided reference genes

Program Settings