Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03619 Brassica carinata HOM05D011026 ORTHO05D012737 4.0e-119 431.4 215 100.0
A03p21670 Brassica napus HOM05D011026 ORTHO05D012737 5.0e-85 318.2 236 70.8
BraA03t11402Z Brassica rapa HOM05D011026 ORTHO05D012737 8.0e-83 310.8 236 69.5
BcaC01g05516 Brassica carinata HOM05D011026 ORTHO05D012737 5.2e-82 308.1 236 68.6
C03p25650 Brassica napus HOM05D011026 ORTHO05D012737 5.2e-82 308.1 236 68.6
BolC3t14953H Brassica oleracea HOM05D011026 ORTHO05D012737 5.2e-82 308.1 236 68.6
BcaB01g03620 Brassica carinata HOM05D011026 ORTHO05D012737 8.0e-67 257.7 231 62.3
AT2G38823 Arabidopsis thaliana HOM05D011026 ORTHO05D012737 2.1e-43 179.9 239 47.3
BolC4t28192H Brassica oleracea HOM05D002835 ORTHO05D012737 2.1e-43 179.9 219 46.1
AL4G36130 Arabidopsis lyrata HOM05D011026 ORTHO05D012737 3.6e-43 179.1 239 47.3
C04p66910 Brassica napus HOM05D002835 ORTHO05D012737 4.7e-43 178.7 219 46.1
A04p29610 Brassica napus HOM05D011026 ORTHO05D012737 1.1e-42 177.6 219 45.2
BraA04t18427Z Brassica rapa HOM05D011026 ORTHO05D012737 3.7e-40 169.1 219 44.3
BcaC02g07443 Brassica carinata HOM05D011026 ORTHO05D012737 3.0e-37 159.5 226 42.5
Carub.0004s2085 Capsella rubella HOM05D011026 ORTHO05D012737 1.4e-34 150.6 241 40.7
Thhalv10017551m.g Eutrema salsugineum HOM05D011026 ORTHO05D012737 1.9e-28 130.2 254 35.0
CARHR133550 Cardamine hirsuta HOM05D011026 ORTHO05D012737 1.1e-18 97.8 95 53.7
THA.LOC104804690 Tarenaya hassleriana HOM05D010570 ORTHO05D012789 5.4e-15 85.5 255 27.8
AT3G54520 Arabidopsis thaliana HOM05D010570 ORTHO05D012789 5.1e-13 79.0 243 28.8
AL5G35570 Arabidopsis lyrata HOM05D010570 ORTHO05D012789 4.3e-12 75.9 242 28.5
Carub.0005s2114 Capsella rubella HOM05D010570 ORTHO05D012789 1.1e-10 71.2 243 27.6
Carub.0005s2115 Capsella rubella HOM05D010570 ORTHO05D012789 4.0e-10 69.3 260 25.8
AL5G35580 Arabidopsis lyrata HOM05D010570 ORTHO05D012789 7.6e-09 65.1 221 26.2
BcaB01g00184 Brassica carinata HOM05D010570 ORTHO05D012789 5.5e-07 58.9 247 26.3


User provided reference genes

Program Settings