Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03617 Brassica carinata HOM05D000290 ORTHO05D007415 1.7e-103 379.4 206 100.0
C03p25970 Brassica napus HOM05D000290 ORTHO05D007415 1.1e-92 343.6 211 90.5
A03p21900 Brassica napus HOM05D000290 ORTHO05D007415 1.2e-91 340.1 211 90.0
BraA03t11426Z Brassica rapa HOM05D000290 ORTHO05D007415 1.2e-91 340.1 211 90.0
BcaB01g03651 Brassica carinata HOM05D000290 ORTHO05D007415 1.7e-90 336.3 211 88.6
BolC3t14982H Brassica oleracea HOM05D000290 ORTHO05D007415 1.7e-90 336.3 211 88.6
Sp4g21520 Schrenkiella parvula HOM05D000290 ORTHO05D007415 3.0e-87 325.5 211 85.8
Thhalv10016257m.g Eutrema salsugineum HOM05D000290 ORTHO05D007415 7.4e-86 320.9 211 83.9
AL4G36490 Arabidopsis lyrata HOM05D000290 ORTHO05D007415 1.9e-78 296.2 211 79.1
AT2G39190 Arabidopsis thaliana HOM05D000290 ORTHO05D007415 4.3e-78 295.0 211 79.6
Carub.0004s2123 Capsella rubella HOM05D000290 ORTHO05D007415 2.0e-75 286.2 212 77.4
Aa31LG5G20180 Aethionema arabicum HOM05D000290 ORTHO05D007415 3.9e-63 245.4 207 67.6
THA.LOC104809972 Tarenaya hassleriana HOM05D000290 ORTHO05D007415 5.7e-54 214.9 212 59.0
Cc09_g02000 Coffea canephora HOM05D000290 ORTHO05D007415 5.7e-38 161.8 212 44.8
CiPaw.02G174700 Carya illinoinensis HOM05D000290 ORTHO05D007415 6.3e-37 158.3 208 46.6
BcaB01g03615 Brassica carinata HOM05D000290 ORTHO05D007415 1.1e-36 157.5 84 100.0
AUR62037660 Chenopodium quinoa HOM05D000290 ORTHO05D007415 2.4e-36 156.4 197 47.2
TWI63G0995 Tripterygium wilfordii HOM05D000290 ORTHO05D007415 7.0e-36 154.8 211 44.1
Cfa001614 Carpinus fangiana HOM05D000290 ORTHO05D007415 1.2e-35 154.1 214 43.5
Dinv11786 Davidia involucrata HOM05D001952 ORTHO05D007415 1.6e-35 153.7 209 46.4
Medtr1g095480 Medicago truncatula HOM05D000290 ORTHO05D007415 3.5e-35 152.5 206 44.2
GSVIVG01016296001 Vitis vinifera HOM05D000290 ORTHO05D007415 3.5e-35 152.5 214 45.8
EL10Ac2g03246 Beta vulgaris HOM05D000290 ORTHO05D007415 5.9e-35 151.8 197 41.6
Glyma.20G179100 Glycine max HOM05D000290 ORTHO05D007415 5.9e-35 151.8 206 41.7
Manes.07G104400 Manihot esculenta HOM05D000290 ORTHO05D007415 5.9e-35 151.8 215 45.1
CANSAT56G0046 Cannabis sativa HOM05D000290 ORTHO05D007415 1.0e-34 151.0 215 42.3
Hma1.2p1_0063F.1_g034380 Hydrangea macrophylla HOM05D000290 ORTHO05D007415 1.0e-34 151.0 211 44.1
TAR636G1312 Trochodendron aralioides HOM05D000290 ORTHO05D007415 1.3e-34 150.6 207 44.0
MSTRG.369 Avicennia marina HOM05D000290 ORTHO05D007415 2.3e-34 149.8 195 44.1
Lj1A916G22 Lonicera japonica HOM05D000290 ORTHO05D007415 2.3e-34 149.8 196 43.9
TPR.G1810 Trifolium pratense HOM05D000290 ORTHO05D007415 2.3e-34 149.8 203 43.3
Eucgr.G02820 Eucalyptus grandis HOM05D000290 ORTHO05D007415 5.0e-34 148.7 211 44.5
Lj5g0003555 Lotus japonicus HOM05D000290 ORTHO05D007415 6.5e-34 148.3 206 43.7
Duzib106G1672 Durio zibethinus HOM05D000290 ORTHO05D007415 8.6e-34 147.9 215 43.3
arahy.Tifrunner.gnm1.ann1.IU7X6X Arachis hypogaea HOM05D000290 ORTHO05D007415 1.1e-33 147.5 199 43.7
SalBow3G1677 Salvia bowleyana HOM05D000290 ORTHO05D007415 1.5e-33 147.1 201 44.3
Cpa.g.sc53.63 Carica papaya HOM05D000290 ORTHO05D007415 1.9e-33 146.7 214 40.7
Potri.010G221000 Populus trichocarpa HOM05D000290 ORTHO05D007415 2.5e-33 146.4 205 44.4
VMungo0720G0458 Vigna mungo HOM05D000290 ORTHO05D007415 4.2e-33 145.6 205 42.9
arahy.Tifrunner.gnm1.ann1.AS9ABP Arachis hypogaea HOM05D000290 ORTHO05D007415 5.5e-33 145.2 199 43.7
Glyma.10G212000 Glycine max HOM05D000290 ORTHO05D007415 5.5e-33 145.2 207 40.1
Prupe.8G142600 Prunus persica HOM05D000290 ORTHO05D007415 5.5e-33 145.2 211 43.1
Sc20g0001930 Simmondsia chinensis HOM05D000290 ORTHO05D007415 7.2e-33 144.8 207 44.4
Sed0009428 Sechium edule HOM05D000290 ORTHO05D007415 9.5e-33 144.4 209 39.2
Gohir.A10G206900 Gossypium hirsutum HOM05D000290 ORTHO05D007415 1.6e-32 143.7 209 45.5
Gohir.D10G215000 Gossypium hirsutum HOM05D000290 ORTHO05D007415 2.1e-32 143.3 209 45.0
Oeu034811.1 Olea europaea HOM05D000290 ORTHO05D007415 2.1e-32 143.3 210 42.4
Thecc.10G071500 Theobroma cacao HOM05D000290 ORTHO05D007415 2.1e-32 143.3 210 46.2
PGR142G4180 Punica granatum HOM05D000290 ORTHO05D007415 2.8e-32 142.9 197 44.7
Atru.chr12.734 Acer truncatum HOM05D000290 ORTHO05D007415 6.1e-32 141.7 213 43.7
Sabra10G0170700 Salix brachista HOM05D000290 ORTHO05D007415 6.1e-32 141.7 218 42.7
CsaV3_5G036380 Cucumis sativus L. HOM05D000290 ORTHO05D007415 8.0e-32 141.4 226 38.5
Ciclev10030711m.g Citrus clementina HOM05D000290 ORTHO05D007415 1.0e-31 141.0 206 42.7
HanXRQChr09g0246431 Helianthus annuus HOM05D000290 ORTHO05D007415 1.0e-31 141.0 200 42.5
Gorai.011G240500 Gossypium raimondii HOM05D000290 ORTHO05D007415 1.4e-31 140.6 209 44.5
MD07G1176000 Malus domestica HOM05D000290 ORTHO05D007415 5.2e-31 138.7 211 39.3
Ah.16g106370 Amaranthus hybridus HOM05D000290 ORTHO05D007415 6.8e-31 138.3 194 41.8
CSS0015563 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007415 6.8e-31 138.3 202 42.1
CSS0025800 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D007415 6.8e-31 138.3 202 42.1
COL.COLO4_23704 Corchorus olitorius HOM05D000290 ORTHO05D007415 6.8e-31 138.3 223 42.6
Haze_16906 Corylus avellana HOM05D000290 ORTHO05D007415 6.8e-31 138.3 256 37.5
ECA232G0301 Erigeron canadensis HOM05D000290 ORTHO05D007415 6.8e-31 138.3 207 42.0
MELO3C012436.2 Cucumis melo HOM05D000290 ORTHO05D007415 1.5e-30 137.1 226 38.5
Nitab4.5_0000233g0060 Nicotiana tabacum HOM05D000290 ORTHO05D007415 1.5e-30 137.1 222 38.7
RcHm_v2.0_Chr1g0363651 Rosa chinensis HOM05D000290 ORTHO05D007415 1.5e-30 137.1 214 41.6
FvH4_7g19760 Fragaria vesca HOM05D000290 ORTHO05D007415 1.3e-29 134.0 215 41.4
FAN03G2244 Fragaria x ananassa HOM05D000290 ORTHO05D007415 1.3e-29 134.0 215 40.9
PSO339G6283 Papaver somniferum HOM05D000290 ORTHO05D007415 1.7e-29 133.7 215 41.4
Peaxi162Scf00272g00222 Petunia axillaris HOM05D000290 ORTHO05D007415 1.7e-29 133.7 223 37.2
QL08p056306 Quercus lobata HOM05D000290 ORTHO05D007415 1.7e-29 133.7 207 42.0
Nitab4.5_0001448g0010 Nicotiana tabacum HOM05D000290 ORTHO05D007415 2.2e-29 133.3 222 38.3
DCAR_006445 Daucus carota HOM05D000290 ORTHO05D007415 3.7e-29 132.5 211 43.1
FAN06G5088 Fragaria x ananassa HOM05D000290 ORTHO05D007415 3.7e-29 132.5 215 41.4
Psat6g185080 Pisum sativum HOM05D000290 ORTHO05D007415 4.9e-29 132.1 207 40.6
Sopen04g019370 Solanum pennellii HOM05D000290 ORTHO05D007415 6.3e-29 131.7 222 37.4
Migut.F01770 Erythranthe guttata HOM05D000290 ORTHO05D007415 1.4e-28 130.6 201 38.8
Solyc04g049390.3 Solanum lycopersicum HOM05D000290 ORTHO05D007415 3.1e-28 129.4 222 36.5
Ca_10576_v3 Cicer arietinum L. HOM05D000290 ORTHO05D007415 7.0e-28 128.3 207 39.1
Lsat_1_v5_gn_9_68761 Lactuca sativa HOM05D000290 ORTHO05D007415 7.0e-28 128.3 206 39.3
AUR62041044 Chenopodium quinoa HOM05D000290 ORTHO05D007415 1.2e-27 127.5 197 42.6
Aqoxy1G01252 Aquilegia oxysepala HOM05D000290 ORTHO05D007415 4.5e-27 125.6 207 41.5
Phvul.007G093900 Phaseolus vulgaris HOM05D000290 ORTHO05D007415 1.0e-26 124.4 206 38.8
Nn2g10759 Nelumbo nucifera HOM05D000290 ORTHO05D007415 1.3e-26 124.0 204 38.7
PSO063G6866 Papaver somniferum HOM05D000290 ORTHO05D007415 1.3e-26 124.0 215 40.0
Lalb_Chr06g0162261 Lupinus albus HOM05D000290 ORTHO05D007415 1.7e-26 123.6 208 36.1
CAN.G29.6 Capsicum annuum HOM05D000290 ORTHO05D007415 6.6e-26 121.7 222 36.5
SGA_v2.0_scaffold341G49361 Striga asiatica HOM05D000290 ORTHO05D007415 8.6e-26 121.3 208 35.6
ClCG05G020930 Citrullus lanatus HOM05D000290 ORTHO05D007415 1.4e-23 114.0 227 33.5
Rhsim09G0040800 Rhododendron simsii HOM05D000290 ORTHO05D007415 1.5e-22 110.5 253 31.2
unitig_22.g5127 Utricularia gibba HOM05D000290 ORTHO05D007415 9.2e-20 101.3 198 32.8
Actinidia03052 Actinidia chinensis HOM05D000290 ORTHO05D007415 1.3e-18 97.4 140 42.9
CDE08G1592 Ceratophyllum demersum HOM05D000290 ORTHO05D007415 1.3e-18 97.4 196 33.2
Os02g0805800 Oryza sativa ssp. japonica HOM05D000290 ORTHO05D007415 3.0e-18 96.3 231 29.0
Hund20129 Selenicereus undatus HOM05D000290 ORTHO05D007415 1.6e-16 90.5 154 34.4
SEGI_30113 Sequoiadendron giganteum HOM05D000290 ORTHO05D007415 3.6e-16 89.4 204 34.8
ATR0115G028 Amborella trichopoda HOM05D000290 ORTHO05D007415 6.2e-16 88.6 200 30.0
Zm00001eb258280 Zea mays HOM05D000290 ORTHO05D007415 3.1e-15 86.3 216 27.3
Lalb_Chr02g0142071 Lupinus albus HOM05D000290 ORTHO05D007415 2.6e-14 83.2 112 43.8
Rhsim03G0124000 Rhododendron simsii HOM05D000290 ORTHO05D007415 1.1e-12 77.8 130 36.9
Rhsim03G0124100 Rhododendron simsii HOM05D000290 ORTHO05D007415 1.1e-12 77.8 130 36.9
HPP92_028088 Vanilla planifolia HOM05D000290 ORTHO05D051561 6.6e-10 68.6 149 32.9
vmacro07077 Vaccinium macrocarpon HOM05D000290 ORTHO05D007415 1.9e-09 67.0 164 31.1
Medtr0224s0030 Medicago truncatula HOM05D000290 ORTHO05D007415 2.1e-08 63.5 75 52.0
Pp3c20_15470 Physcomitrium patens HOM05D000290 ORTHO05D007415 1.4e-07 60.8 198 25.8
CDE02G1570 Ceratophyllum demersum HOM05D000290 ORTHO05D007415 3.1e-07 59.7 125 33.6
SMO118G0130 Selaginella moellendorffii HOM05D000290 ORTHO05D007415 3.4e-06 56.2 191 27.2
Mapoly0035s0057 Marchantia polymorpha HOM05D000290 ORTHO05D007415 7.5e-06 55.1 215 21.9


User provided reference genes

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