Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03481 Brassica carinata HOM05D005394 ORTHO05D006909 9.9e-77 290.0 146 100.0
BcaB01g03482 Brassica carinata HOM05D005394 ORTHO05D006909 1.1e-27 127.1 70 91.4
BcaB03g15148 Brassica carinata HOM05D005394 ORTHO05D006909 1.1e-24 117.1 70 85.7
AL2G26730 Arabidopsis lyrata HOM05D005394 ORTHO05D006909 1.5e-24 116.7 70 85.7
AT1G67930 Arabidopsis thaliana HOM05D005394 ORTHO05D006909 2.0e-24 116.3 70 85.7
Sp5g22930 Schrenkiella parvula HOM05D005394 ORTHO05D006909 2.0e-24 116.3 70 85.7
Thhalv10018283m.g Eutrema salsugineum HOM05D005394 ORTHO05D006909 3.3e-24 115.5 70 85.7
Carub.0002s1442 Capsella rubella HOM05D005394 ORTHO05D006909 9.7e-24 114.0 70 84.3
BcaC08g46216 Brassica carinata HOM05D005394 ORTHO05D006909 1.7e-23 113.2 71 85.9
A07p34470 Brassica napus HOM05D005394 ORTHO05D006909 1.7e-23 113.2 71 84.5
BraA07t31074Z Brassica rapa HOM05D005394 ORTHO05D006909 1.7e-23 113.2 71 84.5
C06p42040 Brassica napus HOM05D005394 ORTHO05D006909 3.7e-23 112.1 71 84.5
BolC6t39222H Brassica oleracea HOM05D005394 ORTHO05D006909 3.7e-23 112.1 71 84.5
THA.LOC104825567 Tarenaya hassleriana HOM05D005394 ORTHO05D006909 3.7e-23 112.1 70 81.4
Aa31sc829G10 Aethionema arabicum HOM05D005394 ORTHO05D006909 1.1e-22 110.5 70 81.4
Potri.005G203900 Populus trichocarpa HOM05D005394 ORTHO05D006909 7.0e-22 107.8 70 80.0
Sabra05G0154700 Salix brachista HOM05D005394 ORTHO05D006909 7.0e-22 107.8 70 80.0
BcaB03g15386 Brassica carinata HOM05D005394 ORTHO05D006909 1.2e-21 107.1 64 87.5
Potri.002G058300 Populus trichocarpa HOM05D005394 ORTHO05D006909 1.2e-21 107.1 70 75.7
Haze_13523 Corylus avellana HOM05D005394 ORTHO05D006909 2.0e-21 106.3 70 75.7
BcaC08g46016 Brassica carinata HOM05D005394 ORTHO05D006909 3.4e-21 105.5 64 85.9
C06p38110 Brassica napus HOM05D005394 ORTHO05D006909 3.4e-21 105.5 64 85.9
BolC6t38908H Brassica oleracea HOM05D005394 ORTHO05D006909 3.4e-21 105.5 112 59.8
CARHR060570 Cardamine hirsuta HOM05D005394 ORTHO05D006909 3.4e-21 105.5 70 81.4
Psat0s1569g0040 Pisum sativum HOM05D005394 ORTHO05D006909 5.9e-21 104.8 70 74.3
VMungo0647G2040 Vigna mungo HOM05D005394 ORTHO05D006909 7.7e-21 104.4 72 75.0
arahy.Tifrunner.gnm1.ann1.3I6JR3 Arachis hypogaea HOM05D005394 ORTHO05D006909 1.0e-20 104.0 66 80.3
arahy.Tifrunner.gnm1.ann1.C2BK4Q Arachis hypogaea HOM05D005394 ORTHO05D006909 1.0e-20 104.0 66 80.3
Cfa023066 Carpinus fangiana HOM05D005394 ORTHO05D006909 1.0e-20 104.0 70 74.3
Phvul.008G193314 Phaseolus vulgaris HOM05D005394 ORTHO05D006909 1.0e-20 104.0 66 78.8
Cpa.g.sc2.200 Carica papaya HOM05D005394 ORTHO05D006909 1.3e-20 103.6 72 76.4
Medtr5g091250 Medicago truncatula HOM05D005394 ORTHO05D006909 1.3e-20 103.6 70 72.9
Thecc.04G175300 Theobroma cacao HOM05D005394 ORTHO05D006909 1.7e-20 103.2 71 76.1
LjContig00049g0014840 Lotus japonicus HOM05D005394 ORTHO05D006909 2.2e-20 102.8 70 72.9
MD09G1149900 Malus domestica HOM05D005394 ORTHO05D006909 5.0e-20 101.7 70 71.4
PGR042G0197 Punica granatum HOM05D005394 ORTHO05D006909 5.0e-20 101.7 70 71.4
Ca_06271_v3 Cicer arietinum L. HOM05D005394 ORTHO05D006909 6.5e-20 101.3 70 70.0
GSVIVG01020852001 Vitis vinifera HOM05D005394 ORTHO05D006909 6.5e-20 101.3 70 72.9
Glyma.02G286300 Glycine max HOM05D005394 ORTHO05D006909 8.5e-20 100.9 72 73.6
Gohir.A10G140600 Gossypium hirsutum HOM05D005394 ORTHO05D006909 8.5e-20 100.9 71 73.2
Prupe.3G175300 Prunus persica HOM05D005394 ORTHO05D006909 8.5e-20 100.9 70 70.0
QL08p044839 Quercus lobata HOM05D005394 ORTHO05D006909 8.5e-20 100.9 70 74.3
CsaV3_6G013780 Cucumis sativus L. HOM05D005394 ORTHO05D006909 1.4e-19 100.1 70 70.0
Lalb_Chr17g0348211 Lupinus albus HOM05D005394 ORTHO05D006909 1.4e-19 100.1 70 72.9
Manes.02G088100 Manihot esculenta HOM05D005394 ORTHO05D006909 1.9e-19 99.8 75 72.0
ClCG02G018460 Citrullus lanatus HOM05D005394 ORTHO05D006909 2.5e-19 99.4 70 68.6
Glyma.14G029500 Glycine max HOM05D005394 ORTHO05D006909 2.5e-19 99.4 72 73.6
Manes.01G130300 Manihot esculenta HOM05D005394 ORTHO05D006909 2.5e-19 99.4 75 72.0
Sabra02G0047500 Salix brachista HOM05D005394 ORTHO05D006909 3.2e-19 99.0 70 71.4
Eucgr.A02013 Eucalyptus grandis HOM05D005394 ORTHO05D006909 4.2e-19 98.6 70 71.4
Ciclev10030699m.g Citrus clementina HOM05D005394 ORTHO05D006909 5.5e-19 98.2 70 74.3
Duzib212G0967 Durio zibethinus HOM05D005394 ORTHO05D006909 5.5e-19 98.2 71 71.8
Sed0020842 Sechium edule HOM05D005394 ORTHO05D006909 5.5e-19 98.2 70 65.7
Actinidia12538 Actinidia chinensis HOM05D005394 ORTHO05D006909 7.2e-19 97.8 91 56.0
MELO3C019674.2 Cucumis melo HOM05D005394 ORTHO05D006909 7.2e-19 97.8 70 68.6
Sed0013102 Sechium edule HOM05D005394 ORTHO05D006909 7.2e-19 97.8 70 68.6
CiPaw.03G191600 Carya illinoinensis HOM05D005394 ORTHO05D006909 1.6e-18 96.7 70 65.7
vmacro00998 Vaccinium macrocarpon HOM05D005394 ORTHO05D006909 1.6e-18 96.7 71 67.6
COL.COLO4_10088 Corchorus olitorius HOM05D005394 ORTHO05D006909 2.1e-18 96.3 71 71.8
Atru.BG.36.p Acer truncatum HOM05D005394 ORTHO05D006909 2.7e-18 95.9 71 71.8
Atru.chr6.2063 Acer truncatum HOM05D005394 ORTHO05D006909 2.7e-18 95.9 71 71.8
MD17G1137000 Malus domestica HOM05D005394 ORTHO05D006909 2.7e-18 95.9 70 68.6
CANSAT64G3008 Cannabis sativa HOM05D005394 ORTHO05D006909 3.6e-18 95.5 78 61.5
Gohir.D10G126100 Gossypium hirsutum HOM05D005394 ORTHO05D006909 3.6e-18 95.5 71 70.4
Gorai.011G139100 Gossypium raimondii HOM05D005394 ORTHO05D006909 3.6e-18 95.5 71 70.4
Sc06g0007690 Simmondsia chinensis HOM05D005394 ORTHO05D006909 4.7e-18 95.1 87 55.2
CSS0015023 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 6.1e-18 94.7 70 67.1
CSS0042292 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 6.1e-18 94.7 70 67.1
HanXRQChr09g0276121 Helianthus annuus HOM05D005394 ORTHO05D006909 8.0e-18 94.4 69 72.5
HanXRQChr16g0503181 Helianthus annuus HOM05D005394 ORTHO05D006909 8.0e-18 94.4 69 72.5
Cc05_g09680 Coffea canephora HOM05D005394 ORTHO05D006909 1.0e-17 94.0 71 67.6
PSO541G2917 Papaver somniferum HOM05D005394 ORTHO05D006909 1.8e-17 93.2 70 67.1
PSO675G3098 Papaver somniferum HOM05D005394 ORTHO05D006909 1.8e-17 93.2 70 68.6
HanXRQChr17g0559821 Helianthus annuus HOM05D005394 ORTHO05D006909 2.3e-17 92.8 69 71.0
MBI16_g26174_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 2.3e-17 92.8 109 49.5
TWI14G0801 Tripterygium wilfordii HOM05D005394 ORTHO05D006909 2.3e-17 92.8 70 70.0
Lsat_1_v5_gn_8_142320 Lactuca sativa HOM05D005394 ORTHO05D006909 3.9e-17 92.0 69 68.1
Rhsim12G0008000 Rhododendron simsii HOM05D005394 ORTHO05D006909 3.9e-17 92.0 70 64.3
Aqoxy1G01759 Aquilegia oxysepala HOM05D005394 ORTHO05D006909 5.2e-17 91.7 70 65.7
Lj1A601G23 Lonicera japonica HOM05D005394 ORTHO05D006909 1.1e-16 90.5 70 68.6
MBI10_g36386_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 2.0e-16 89.7 66 68.2
Nn8g41245 Nelumbo nucifera HOM05D005394 ORTHO05D006909 2.0e-16 89.7 70 68.6
Peaxi162Scf00035g02520 Petunia axillaris HOM05D005394 ORTHO05D006909 2.0e-16 89.7 69 68.1
TAR626G0164 Trochodendron aralioides HOM05D005394 ORTHO05D006909 2.0e-16 89.7 70 71.4
AUR62015139 Chenopodium quinoa HOM05D005394 ORTHO05D006909 4.4e-16 88.6 71 67.6
AUR62017599 Chenopodium quinoa HOM05D005394 ORTHO05D006909 4.4e-16 88.6 71 67.6
Solyc10g007720.4 Solanum lycopersicum HOM05D005394 ORTHO05D006909 4.4e-16 88.6 70 65.7
Sopen10g003630 Solanum pennellii HOM05D005394 ORTHO05D006909 4.4e-16 88.6 70 65.7
Dinv07076 Davidia involucrata HOM05D005394 ORTHO05D006909 9.7e-16 87.4 57 75.4
PGSC0003DMG400021243 Solanum tuberosum HOM05D005394 ORTHO05D006909 9.7e-16 87.4 70 65.7
RcHm_v2.0_Chr2g0151781 Rosa chinensis HOM05D005394 ORTHO05D006909 1.3e-15 87.0 70 61.4
FvH4_6g38530 Fragaria vesca HOM05D005394 ORTHO05D006909 1.7e-15 86.7 70 61.4
FAN02G2503 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.7e-15 86.7 70 61.4
FAN05G5751 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.7e-15 86.7 70 61.4
FAN14G2062 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.7e-15 86.7 70 61.4
Oeu020932.1 Olea europaea HOM05D005394 ORTHO05D006909 2.2e-15 86.3 77 61.0
Nitab4.5_0002209g0020 Nicotiana tabacum HOM05D005394 ORTHO05D006909 2.8e-15 85.9 69 65.2
Nitab4.5_0003104g0050 Nicotiana tabacum HOM05D005394 ORTHO05D006909 2.8e-15 85.9 69 65.2
ECA233G4606 Erigeron canadensis HOM05D005394 ORTHO05D006909 3.7e-15 85.5 61 72.1
SGA_v2.0_scaffold4G02121 Striga asiatica HOM05D005394 ORTHO05D006909 3.7e-15 85.5 71 63.4
Ah.01g001930 Amaranthus hybridus HOM05D005394 ORTHO05D006909 4.8e-15 85.1 69 66.7
Migut.E01770 Erythranthe guttata HOM05D005394 ORTHO05D006909 6.3e-15 84.7 71 64.8
FAN09G4660 Fragaria x ananassa HOM05D005394 ORTHO05D006909 6.3e-15 84.7 70 60.0
CDE02G3161 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 1.1e-14 84.0 69 65.2
EL10Ac9g22847 Beta vulgaris HOM05D005394 ORTHO05D006909 1.4e-14 83.6 70 67.1
MSTRG.15035 Avicennia marina HOM05D005394 ORTHO05D006909 1.8e-14 83.2 71 63.4
DCAR_009812 Daucus carota HOM05D005394 ORTHO05D006909 2.4e-14 82.8 62 67.7
DCAR_032393 Daucus carota HOM05D005394 ORTHO05D011132 2.4e-14 82.8 62 67.7
unitig_46.g18287 Utricularia gibba HOM05D005394 ORTHO05D006909 5.3e-14 81.6 77 57.1
HanXRQChr14g0428721 Helianthus annuus HOM05D005394 ORTHO05D006909 1.6e-13 80.1 111 46.8
Mapoly0082s0010 Marchantia polymorpha HOM05D005394 ORTHO05D006909 2.6e-13 79.3 64 64.1
SHI02103 Sapria himalayana HOM05D005394 ORTHO05D006909 5.9e-13 78.2 68 54.4
HPP92_002195 Vanilla planifolia HOM05D005394 ORTHO05D006909 1.3e-12 77.0 89 50.6
SEGI_12117 Sequoiadendron giganteum HOM05D005394 ORTHO05D006909 2.9e-12 75.9 70 54.3
Pp3c10_16550 Physcomitrium patens HOM05D005394 ORTHO05D006909 8.5e-12 74.3 66 56.1
Pp3c14_13420 Physcomitrium patens HOM05D005394 ORTHO05D006909 3.2e-11 72.4 66 56.1
ATR0605G001 Amborella trichopoda HOM05D005394 ORTHO05D006909 5.5e-11 71.6 71 56.3
SMO266G0070 Selaginella moellendorffii HOM05D005394 ORTHO05D006909 2.3e-09 66.2 110 40.0
Zm00001eb286850 Zea mays HOM05D005394 ORTHO05D006909 1.5e-08 63.5 66 54.5
CBR_g53704 Chara braunii HOM05D005394 ORTHO05D006909 2.0e-08 63.2 70 50.0
CSS0027861 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 3.1e-06 55.8 63 49.2


User provided reference genes

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