Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 8.2e-168 593.6 285 100.0
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 1.9e-164 582.4 285 97.5
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 3.2e-164 581.6 285 97.5
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 3.2e-164 581.6 285 97.5
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 5.5e-164 580.9 285 97.5
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 2.1e-163 578.9 285 96.8
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 3.1e-159 565.1 285 93.7
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 3.4e-158 561.6 285 94.0
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 5.9e-158 560.8 285 92.3
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 2.2e-157 558.9 285 93.0
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 6.5e-157 557.4 285 92.6
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 5.5e-156 554.3 285 91.9
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 1.1e-153 546.6 286 92.7
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 1.9e-153 545.8 286 92.0
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 1.9e-153 545.8 286 92.0
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 7.4e-153 543.9 286 92.0
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 3.7e-152 541.6 285 89.5
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 1.0e-149 533.5 286 87.8
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 1.3e-141 506.5 285 81.4
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 2.9e-141 505.4 285 82.1
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 2.9e-141 505.4 285 82.1
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 6.5e-141 504.2 285 82.1
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 6.5e-141 504.2 285 81.1
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 1.1e-140 503.4 280 82.5
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 1.4e-140 503.1 285 81.4
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 2.5e-140 502.3 284 81.7
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 3.2e-140 501.9 284 83.5
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 5.5e-140 501.1 280 83.6
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 1.2e-139 500.0 285 80.7
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 1.6e-139 499.6 284 81.3
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 2.7e-139 498.8 285 81.1
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 2.7e-139 498.8 285 80.7
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 3.6e-139 498.4 285 80.7
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 3.6e-139 498.4 285 81.1
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 4.7e-139 498.0 285 80.7
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 4.7e-139 498.0 285 80.4
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 6.1e-139 497.7 285 81.1
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 8.0e-139 497.3 285 80.7
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 8.0e-139 497.3 285 80.4
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 1.0e-138 496.9 285 80.0
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 1.4e-138 496.5 284 81.3
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 2.3e-138 495.7 284 81.3
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 3.9e-138 495.0 278 82.7
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 3.9e-138 495.0 285 80.4
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 3.9e-138 495.0 285 80.4
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 6.7e-138 494.2 288 80.9
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 6.7e-138 494.2 283 81.3
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 1.5e-137 493.0 285 79.6
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 1.5e-137 493.0 285 79.6
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 2.0e-137 492.7 284 81.0
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 4.4e-137 491.5 284 80.6
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 4.4e-137 491.5 284 80.6
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 4.4e-137 491.5 285 80.0
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 5.7e-137 491.1 279 80.6
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 5.7e-137 491.1 285 79.6
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 7.4e-137 490.7 285 78.2
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 7.4e-137 490.7 278 80.6
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 7.4e-137 490.7 286 79.7
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 9.7e-137 490.3 285 78.9
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 1.3e-136 490.0 285 79.6
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 1.3e-136 490.0 270 82.6
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 2.2e-136 489.2 283 80.6
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 4.8e-136 488.0 284 78.5
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 6.3e-136 487.6 285 78.9
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 8.2e-136 487.3 279 80.3
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 1.1e-135 486.9 279 79.9
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 1.1e-135 486.9 280 79.6
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 1.1e-135 486.9 284 78.5
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 1.1e-135 486.9 284 78.2
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 1.4e-135 486.5 302 76.2
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.4e-135 486.5 280 78.9
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 1.8e-135 486.1 280 80.0
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 2.4e-135 485.7 284 78.5
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 2.4e-135 485.7 286 78.7
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 3.1e-135 485.3 285 78.6
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 5.3e-135 484.6 285 78.2
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 7.0e-135 484.2 279 79.2
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 7.0e-135 484.2 279 79.2
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 1.2e-134 483.4 290 77.6
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 1.6e-134 483.0 284 77.8
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 2.6e-134 482.3 289 78.9
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 5.9e-134 481.1 282 79.4
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 5.9e-134 481.1 279 79.6
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 1.0e-133 480.3 283 79.5
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 1.0e-133 480.3 285 78.2
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 2.9e-133 478.8 283 77.4
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 3.8e-133 478.4 284 77.5
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 8.5e-133 477.2 280 77.9
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 1.1e-132 476.9 287 78.4
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 2.5e-132 475.7 280 77.9
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 3.2e-132 475.3 282 77.7
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 3.2e-132 475.3 273 80.6
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 3.6e-131 471.9 280 77.1
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 1.0e-130 470.3 285 75.4
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 2.3e-130 469.2 297 75.8
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 5.2e-130 468.0 326 69.3
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 2.6e-129 465.7 277 76.5
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 4.4e-129 464.9 278 78.4
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 9.7e-129 463.8 279 76.7
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 1.3e-128 463.4 282 77.0
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 1.1e-127 460.3 284 74.6
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 1.0e-125 453.8 285 74.4
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 1.3e-125 453.4 285 74.7
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 1.5e-124 449.9 277 74.4
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 2.5e-124 449.1 276 74.6
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 3.2e-124 448.7 279 75.3
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 7.2e-124 447.6 281 73.7
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 5.7e-121 438.0 236 86.0
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 1.7e-120 436.4 247 82.2
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 7.7e-118 427.6 284 70.4
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 1.0e-114 417.2 287 72.8
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 1.8e-114 416.4 275 71.3
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 2.0e-113 412.9 280 67.1
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 2.2e-112 409.5 233 78.5
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 1.1e-108 397.1 284 65.8
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 2.8e-107 392.5 280 64.3
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 5.2e-106 388.3 225 80.4
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 9.8e-105 384.0 283 65.4
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 2.3e-101 372.9 223 78.0
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 2.3e-98 362.8 196 85.7
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 6.8e-90 334.7 283 55.8
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 4.6e-86 322.0 289 57.1
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 5.2e-82 308.5 273 57.1
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 1.5e-76 290.4 171 78.4
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 1.2e-75 287.3 169 77.5
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 4.9e-72 275.4 264 50.0
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 2.0e-65 253.4 280 46.4
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 1.6e-62 243.8 278 47.5
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 3.5e-62 242.7 280 48.2
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 1.0e-61 241.1 231 55.0
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 1.1e-47 194.5 114 77.2
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 4.5e-41 172.6 103 74.8
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 3.2e-23 113.2 78 70.5
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 7.0e-18 95.5 67 64.2
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 6.8e-13 79.0 52 69.2
Pp3c1_10050 Physcomitrium patens HOM05D005608 ORTHO05D319324 1.7e-11 74.3 56 57.1


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