Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03385 Brassica carinata HOM05D000209 ORTHO05D000129 1.9e-104 382.5 191 100.0
BcaC06g34070 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-26 124.0 349 33.0
A06p43770 Brassica napus HOM05D000209 ORTHO05D000129 1.1e-19 100.9 71 70.4
BraA06t27254Z Brassica rapa HOM05D000209 ORTHO05D000129 4.7e-18 95.5 71 66.2
BcaC06g34076 Brassica carinata HOM05D000209 ORTHO05D000129 6.1e-18 95.1 71 66.2
C07p33050 Brassica napus HOM05D000209 ORTHO05D000129 6.1e-18 95.1 71 66.2
BolC7t43812H Brassica oleracea HOM05D000209 ORTHO05D000129 6.1e-18 95.1 71 66.2
A06p43760 Brassica napus HOM05D000209 ORTHO05D000129 8.0e-18 94.7 71 64.8
BcaC06g34071 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-17 94.0 71 67.6
BolC7t43814H Brassica oleracea HOM05D000209 ORTHO05D000129 1.4e-17 94.0 71 67.6
BraA06t27255Z Brassica rapa HOM05D000209 ORTHO05D000129 7.7e-13 78.2 51 72.5
BcaC06g31247 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-12 77.8 63 65.1
AT1G32140 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.5e-11 72.0 76 51.3
AT4G17200 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.5e-11 72.0 76 50.0
CARHR088850 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.6e-10 69.3 71 53.5
Carub.0005s2337 Capsella rubella HOM05D000209 ORTHO05D000129 4.7e-10 68.9 74 51.4
BolC4t26727H Brassica oleracea HOM05D000209 ORTHO05D000129 6.1e-10 68.6 88 50.0
Carub.0001s3046 Capsella rubella HOM05D000209 ORTHO05D000129 6.1e-10 68.6 76 51.3
AL3G40230 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.0e-10 68.2 76 53.9
Thhalv10009753m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.0e-09 67.8 75 49.3
BcaC02g08719 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-09 67.4 88 48.9
A09p26310 Brassica napus HOM05D000209 ORTHO05D000129 1.8e-09 67.0 79 49.4
Carub.0008s1500 Capsella rubella HOM05D000209 ORTHO05D000129 1.8e-09 67.0 74 50.0
AL3G25960 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.3e-09 66.6 71 47.9
AL1G40160 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.0e-09 66.2 78 50.0
AT3G14030 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.0e-09 66.2 71 53.5
A09p26190 Brassica napus HOM05D000209 ORTHO05D000129 3.0e-09 66.2 78 48.7
BolC9t56160H Brassica oleracea HOM05D000209 ORTHO05D000129 3.0e-09 66.2 78 48.7
BraA03t13347Z Brassica rapa HOM05D000209 ORTHO05D000129 3.0e-09 66.2 72 50.0
BraA09t38187Z Brassica rapa HOM05D000209 ORTHO05D000129 3.0e-09 66.2 78 48.7
C04p51360 Brassica napus HOM05D000209 ORTHO05D000129 4.0e-09 65.9 88 48.9
CARHR134370 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.0e-09 65.9 74 52.7
CARHR162370 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.0e-09 65.9 73 45.2
BcaC04g21314 Brassica carinata HOM05D000209 ORTHO05D000129 6.8e-09 65.1 78 47.4
Thhalv10022026m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.8e-09 65.1 78 48.7
AL1G21870 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.5e-08 63.9 71 46.5
BolC3t16425H Brassica oleracea HOM05D000209 ORTHO05D000129 1.5e-08 63.9 89 47.2
CARHR088150 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.5e-08 63.9 71 47.9
AL2G13920 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.0e-08 63.5 69 53.6
BcaB04g19131 Brassica carinata HOM05D000209 ORTHO05D000129 2.0e-08 63.5 73 47.9
BcaB06g25675 Brassica carinata HOM05D000209 ORTHO05D000129 2.6e-08 63.2 84 44.0
C03p51310 Brassica napus HOM05D000209 ORTHO05D000129 2.6e-08 63.2 69 52.2
C09p33470 Brassica napus HOM05D000209 ORTHO05D000129 2.6e-08 63.2 57 54.4
BolC3t17419H Brassica oleracea HOM05D000209 ORTHO05D000129 2.6e-08 63.2 69 52.2
BolC9t56183H Brassica oleracea HOM05D000209 ORTHO05D000129 2.6e-08 63.2 57 54.4
CARHR154640 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.6e-08 63.2 67 52.2
Thhalv10015452m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.6e-08 63.2 74 45.9
AL3G25690 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.4e-08 62.8 69 55.1
AT3G13820 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.4e-08 62.8 71 46.5
BraA09t39261Z Brassica rapa HOM05D000209 ORTHO05D000129 3.4e-08 62.8 69 52.2
Carub.0003s1313 Capsella rubella HOM05D000209 ORTHO05D000129 3.4e-08 62.8 69 55.1
Carub.0003s1362 Capsella rubella HOM05D000209 ORTHO05D000129 3.4e-08 62.8 72 51.4
Thhalv10024142m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.4e-08 62.8 79 44.3
C07p41000 Brassica napus HOM05D000209 ORTHO05D000129 4.4e-08 62.4 76 50.0
BolC7t44630H Brassica oleracea HOM05D000209 ORTHO05D000129 4.4e-08 62.4 76 50.0
Carub.0002s0302 Capsella rubella HOM05D000209 ORTHO05D000129 4.4e-08 62.4 71 46.5
AL1G35700 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.7e-08 62.0 73 47.9
AL1G46220 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.7e-08 62.0 70 48.6
BcaB04g19128 Brassica carinata HOM05D000209 ORTHO05D000129 5.7e-08 62.0 73 47.9
A03p41930 Brassica napus HOM05D000209 ORTHO05D000129 5.7e-08 62.0 72 48.6
AL1G40180 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.5e-08 61.6 98 41.8
AT1G24800 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.5e-08 61.6 77 46.8
AT1G24881 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.5e-08 61.6 77 46.8
AT1G25055 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.5e-08 61.6 77 46.8
AT1G25150 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.5e-08 61.6 77 46.8
AT1G25211 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.5e-08 61.6 77 46.8
BcaB07g32326 Brassica carinata HOM05D000209 ORTHO05D000129 7.5e-08 61.6 77 49.4
BcaC01g03537 Brassica carinata HOM05D000209 ORTHO05D000129 7.5e-08 61.6 69 50.7
C03p51320 Brassica napus HOM05D000209 ORTHO05D000129 7.5e-08 61.6 69 50.7
BolC3t17420H Brassica oleracea HOM05D000209 ORTHO05D000129 7.5e-08 61.6 69 50.7
AL1G39630 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.8e-08 61.2 87 42.5
AL3G25970 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.8e-08 61.2 71 46.5
AL3G27510 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.8e-08 61.2 78 48.7
AT3G19880 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.8e-08 61.2 69 50.7
BcaB07g32325 Brassica carinata HOM05D000209 ORTHO05D000129 9.8e-08 61.2 70 50.0
CARHR260790 Cardamine hirsuta HOM05D000209 ORTHO05D000129 9.8e-08 61.2 75 46.7
BraA09t39625Z Brassica rapa HOM05D000209 ORTHO05D000129 1.3e-07 60.8 69 43.5
Thhalv10022091m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.3e-07 60.8 67 50.7
AL7G39300 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.7e-07 60.5 73 50.7
AT1G59680 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.7e-07 60.5 71 47.9
BcaC01g03538 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-07 60.5 69 50.7
Carub.0003s2503 Capsella rubella HOM05D000209 ORTHO05D000129 1.7e-07 60.5 74 48.6
AL2G18120 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.2e-07 60.1 72 50.0
AL3G25680 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.2e-07 60.1 88 39.8
C03p51330 Brassica napus HOM05D000209 ORTHO05D000129 2.2e-07 60.1 69 50.7
BolC3t16651H Brassica oleracea HOM05D000209 ORTHO05D000129 2.2e-07 60.1 78 50.0
AL5G29340 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.8e-07 59.7 69 46.4
C09p33240 Brassica napus HOM05D000209 ORTHO05D018806 2.8e-07 59.7 97 38.1
BraA10t43735Z Brassica rapa HOM05D000209 ORTHO05D000129 2.8e-07 59.7 76 48.7
Carub.0001s1047 Capsella rubella HOM05D000209 ORTHO05D000129 2.8e-07 59.7 75 44.0
Carub.0001s2536 Capsella rubella HOM05D000209 ORTHO05D000129 2.8e-07 59.7 79 46.8
CARHR088590 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.8e-07 59.7 71 46.5
AL5G24990 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.7e-07 59.3 67 52.2
BcaC09g48335 Brassica carinata HOM05D000209 ORTHO05D000129 3.7e-07 59.3 69 49.3
A04p25410 Brassica napus HOM05D000209 ORTHO05D000129 3.7e-07 59.3 88 44.3
C01p51240 Brassica napus HOM05D000209 ORTHO05D000129 3.7e-07 59.3 69 49.3
BolC1t05079H Brassica oleracea HOM05D000209 ORTHO05D000129 3.7e-07 59.3 69 49.3
BraA04t18044Z Brassica rapa HOM05D000209 ORTHO05D000129 3.7e-07 59.3 88 44.3
Thhalv10000550m.g Eutrema salsugineum HOM05D000209 ORTHO05D020214 3.7e-07 59.3 69 49.3
AT5G41490 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.8e-07 58.9 78 42.3
CARHR260760 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.8e-07 58.9 75 46.7
AT1G66490 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.3e-07 58.5 71 49.3
BraA03t12579Z Brassica rapa HOM05D000209 ORTHO05D000129 6.3e-07 58.5 72 50.0
BraA05t22190Z Brassica rapa HOM05D000209 ORTHO05D000129 6.3e-07 58.5 70 50.0
Carub.0002s0781 Capsella rubella HOM05D000209 ORTHO05D000129 6.3e-07 58.5 76 48.7
Carub.0005s1584 Capsella rubella HOM05D000209 ORTHO05D000129 6.3e-07 58.5 79 44.3
CARHR025790 Cardamine hirsuta HOM05D000209 ORTHO05D000129 6.3e-07 58.5 76 43.4
BraA03t12790Z Brassica rapa HOM05D000209 ORTHO05D000129 8.3e-07 58.2 69 47.8
Carub.0003s2963 Capsella rubella HOM05D000209 ORTHO05D000129 8.3e-07 58.2 75 49.3
BcaB07g32321 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-06 57.8 73 49.3
Thhalv10000447m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.1e-06 57.8 79 43.0
Thhalv10019643m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.1e-06 57.8 69 47.8
Thhalv10021978m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.1e-06 57.8 67 53.7
AL3G30470 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.4e-06 57.4 79 49.4
AL3G40130 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.4e-06 57.4 74 47.3
AL4G35660 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.4e-06 57.4 69 43.5
AT3G13680 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.4e-06 57.4 71 47.9
BcaB06g25681 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-06 57.4 82 46.3
BcaB07g32323 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-06 57.4 82 48.8
BcaC08g45990 Brassica carinata HOM05D000209 ORTHO05D000129 1.4e-06 57.4 85 47.1
BolC1t04314H Brassica oleracea HOM05D000209 ORTHO05D000129 1.4e-06 57.4 69 46.4
CARHR115940 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.4e-06 57.4 80 45.0
BcaB06g25676 Brassica carinata HOM05D000209 ORTHO05D000129 1.8e-06 57.0 49 59.2
BraA09t39626Z Brassica rapa HOM05D000209 ORTHO05D020214 1.8e-06 57.0 72 51.4
AL1G40170 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.4e-06 56.6 77 48.1
AL3G25930 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.4e-06 56.6 74 47.3
AL5G29310 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.4e-06 56.6 91 41.8
BcaC04g19787 Brassica carinata HOM05D000209 ORTHO05D000129 2.4e-06 56.6 69 49.3
BcaC09g48331 Brassica carinata HOM05D000209 ORTHO05D000129 2.4e-06 56.6 69 47.8
BcaC09g48337 Brassica carinata HOM05D000209 ORTHO05D000129 2.4e-06 56.6 69 47.8
BcaC09g48347 Brassica carinata HOM05D000209 ORTHO05D000129 2.4e-06 56.6 69 47.8
BcaC09g48351 Brassica carinata HOM05D000209 ORTHO05D001885 2.4e-06 56.6 69 47.8
A03p36190 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-06 56.6 69 46.4
A09p41330 Brassica napus HOM05D000209 ORTHO05D020214 2.4e-06 56.6 72 51.4
C01p51070 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-06 56.6 69 47.8
C01p51110 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-06 56.6 69 47.8
C01p51220 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-06 56.6 69 47.8
C01p51320 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-06 56.6 69 47.8
C01p51360 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-06 56.6 69 47.8
C05p50670 Brassica napus HOM05D000209 ORTHO05D000129 2.4e-06 56.6 70 45.7
BolC1t05068H Brassica oleracea HOM05D000209 ORTHO05D000129 2.4e-06 56.6 69 47.8
BolC1t05080H Brassica oleracea HOM05D000209 ORTHO05D000129 2.4e-06 56.6 69 47.8
BolC5t33815H Brassica oleracea HOM05D000209 ORTHO05D000129 2.4e-06 56.6 70 45.7
BolC9t58027H Brassica oleracea HOM05D000209 ORTHO05D000129 2.4e-06 56.6 69 49.3
BraA08t33390Z Brassica rapa HOM05D000209 ORTHO05D000129 2.4e-06 56.6 75 45.3
Carub.0001s2537 Capsella rubella HOM05D000209 ORTHO05D000129 2.4e-06 56.6 77 45.5
Carub.0003s1310 Capsella rubella HOM05D000209 ORTHO05D000129 2.4e-06 56.6 112 41.1
AL6G52510 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.1e-06 56.2 70 48.6
AL7G47920 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.1e-06 56.2 90 41.1
AT3G49510 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.1e-06 56.2 97 41.2
Carub.0003s1295 Capsella rubella HOM05D000209 ORTHO05D000129 3.1e-06 56.2 69 49.3
AT5G41500 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.1e-06 55.8 71 43.7
BcaB07g32324 Brassica carinata HOM05D000209 ORTHO05D000129 4.1e-06 55.8 70 51.4
BcaC01g03174 Brassica carinata HOM05D000209 ORTHO05D000129 4.1e-06 55.8 80 46.2
BcaC01g03726 Brassica carinata HOM05D000209 ORTHO05D000129 4.1e-06 55.8 79 38.0
BcaC01g06889 Brassica carinata HOM05D000209 ORTHO05D000129 4.1e-06 55.8 78 48.7
BcaC09g48375 Brassica carinata HOM05D000209 ORTHO05D000129 4.1e-06 55.8 67 49.3
A03p40440 Brassica napus HOM05D004054 ORTHO05D004945 4.1e-06 55.8 79 38.0
C01p50760 Brassica napus HOM05D000209 ORTHO05D000129 4.1e-06 55.8 67 49.3
C03p43830 Brassica napus HOM05D000209 ORTHO05D000129 4.1e-06 55.8 77 46.8
BolC1t05025H Brassica oleracea HOM05D000209 ORTHO05D000129 4.1e-06 55.8 67 49.3
BolC3t17813H Brassica oleracea HOM05D000209 ORTHO05D000129 4.1e-06 55.8 80 46.2
BolC3t17814H Brassica oleracea HOM05D000209 ORTHO05D000129 4.1e-06 55.8 80 46.2
CARHR095010 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.1e-06 55.8 68 45.6
AL3G28670 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.4e-06 55.5 70 47.1
AT3G23420 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.4e-06 55.5 73 49.3
Carub.0003s1337 Capsella rubella HOM05D000209 ORTHO05D000129 5.4e-06 55.5 88 34.1
Carub.0004s0861 Capsella rubella HOM05D000209 ORTHO05D000129 5.4e-06 55.5 80 38.8
Carub.0007s3401 Capsella rubella HOM05D000209 ORTHO05D000129 5.4e-06 55.5 98 32.7
CARHR092560 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.4e-06 55.5 72 50.0
CARHR214390 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.4e-06 55.5 70 42.9
AL3G25710 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.0e-06 55.1 71 46.5
AL3G34600 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.0e-06 55.1 67 50.7
AT3G22421 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.0e-06 55.1 69 50.7
AT5G41510 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.0e-06 55.1 71 43.7
A04p04970 Brassica napus HOM05D000209 ORTHO05D041130 7.0e-06 55.1 75 48.0
C01p46970 Brassica napus HOM05D000209 ORTHO05D000129 7.0e-06 55.1 88 38.6
BolC1t04665H Brassica oleracea HOM05D000209 ORTHO05D000129 7.0e-06 55.1 88 38.6
BraA03t13201Z Brassica rapa HOM05D000209 ORTHO05D000129 7.0e-06 55.1 79 36.7
BraA04t16210Z Brassica rapa HOM05D000209 ORTHO05D041130 7.0e-06 55.1 75 48.0
Carub.0003s1235 Capsella rubella HOM05D000209 ORTHO05D000129 7.0e-06 55.1 69 50.7
Carub.0003s2043 Capsella rubella HOM05D000209 ORTHO05D000129 7.0e-06 55.1 72 51.4
CARHR101240 Cardamine hirsuta HOM05D000209 ORTHO05D000129 7.0e-06 55.1 69 42.0
CARHR115970 Cardamine hirsuta HOM05D000209 ORTHO05D000129 7.0e-06 55.1 69 46.4
Thhalv10027497m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.0e-06 55.1 69 42.0
Sp4g04370 Schrenkiella parvula HOM05D000209 ORTHO05D000129 7.0e-06 55.1 69 49.3
AL1G54030 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.1e-06 54.7 74 48.6
AL4G35680 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.1e-06 54.7 86 40.7
AT3G19890 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.1e-06 54.7 72 44.4
A01p39780 Brassica napus HOM05D000209 ORTHO05D000129 9.1e-06 54.7 69 47.8
BraA01t04017Z Brassica rapa HOM05D000209 ORTHO05D000129 9.1e-06 54.7 69 47.8
BraA04t18465Z Brassica rapa HOM05D000209 ORTHO05D000129 9.1e-06 54.7 69 43.5


User provided reference genes

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