Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g03384 Brassica carinata HOM05D002300 ORTHO05D002340 9.7e-43 176.4 89 100.0
AL4G42150 Arabidopsis lyrata HOM05D002300 ORTHO05D002340 8.0e-29 130.2 92 71.7
BcaC02g12398 Brassica carinata HOM05D002300 ORTHO05D002340 8.8e-28 126.7 92 71.7
Sp4g25510 Schrenkiella parvula HOM05D002300 ORTHO05D002340 5.7e-27 124.0 93 69.9
AT2G43410 Arabidopsis thaliana HOM05D002300 ORTHO05D002340 1.3e-26 122.9 93 67.7
Thhalv10001307m.g Eutrema salsugineum HOM05D002300 ORTHO05D002340 1.3e-26 122.9 93 68.8
A05p03760 Brassica napus HOM05D002300 ORTHO05D002340 5.3e-25 117.5 87 69.0
Aa31LG1G25160 Aethionema arabicum HOM05D002300 ORTHO05D002340 1.4e-17 92.8 102 53.9
CARHR138490 Cardamine hirsuta HOM05D002300 ORTHO05D002340 1.3e-15 86.3 80 62.5
BolC4t22079H Brassica oleracea HOM05D002042 ORTHO05D002340 5.0e-15 84.3 88 56.8
BcaB01g03315 Brassica carinata HOM05D002300 ORTHO05D002340 2.5e-14 82.0 89 58.4
C04p04460 Brassica napus HOM05D002300 ORTHO05D002340 1.6e-13 79.3 88 53.4
AL5G41460 Arabidopsis lyrata HOM05D002300 ORTHO05D002340 6.8e-12 73.9 102 49.0
Carub.0004s2588 Capsella rubella HOM05D002300 ORTHO05D002340 3.4e-11 71.6 93 48.4
THA.LOC104803786 Tarenaya hassleriana HOM05D002300 ORTHO05D002340 2.2e-10 68.9 104 46.2
Aa31LG10G13870 Aethionema arabicum HOM05D002300 ORTHO05D002340 3.7e-10 68.2 101 44.6
Sp5g03620 Schrenkiella parvula HOM05D002300 ORTHO05D002340 3.1e-09 65.1 104 43.3
Carub.0005s2627 Capsella rubella HOM05D002300 ORTHO05D002340 4.1e-09 64.7 103 44.7


User provided reference genes

Program Settings